RNA–Protein interactions for RNA: ENST00000338684.9

MUC1-202, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,107 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-202ENST00000338684 IFNAR1P17181 557 aa17.15■□□□□ 0.34
MUC1-202ENST00000338684 HOXA13P31271 388 aaPredicted RBP17.15■□□□□ 0.34
MUC1-202ENST00000338684 RFC2P35250 354 aa17.15■□□□□ 0.34
MUC1-202ENST00000338684 FUT2Q10981 343 aa17.15■□□□□ 0.34
MUC1-202ENST00000338684 SCRN1Q12765 414 aa17.15■□□□□ 0.34
MUC1-202ENST00000338684 TJAP1Q5JTD0 557 aa17.15■□□□□ 0.34
MUC1-202ENST00000338684 SESTD1Q86VW0 696 aa17.15■□□□□ 0.34
MUC1-202ENST00000338684 IL31RAQ8NI17 732 aa17.15■□□□□ 0.34
MUC1-202ENST00000338684 GTF3C6Q969F1 213 aa17.15■□□□□ 0.34
MUC1-202ENST00000338684 HDAC6Q9UBN7 1215 aa17.15■□□□□ 0.34
MUC1-202ENST00000338684 PCDHA1Q9Y5I3 950 aa17.15■□□□□ 0.34
MUC1-202ENST00000338684 MYH7BA7E2Y1 1941 aa17.15■□□□□ 0.34
MUC1-202ENST00000338684 EPOPA6NHQ4 379 aa17.14■□□□□ 0.33
MUC1-202ENST00000338684 SORBS3O60504 671 aa17.14■□□□□ 0.33
MUC1-202ENST00000338684 AKAP17AQ02040 695 aaKnown RBP17.14■□□□□ 0.33
MUC1-202ENST00000338684 BFSP2Q13515 415 aa17.14■□□□□ 0.33
MUC1-202ENST00000338684 HIC1Q14526 733 aa17.14■□□□□ 0.33
MUC1-202ENST00000338684 NTRK3Q16288 839 aa17.14■□□□□ 0.33
MUC1-202ENST00000338684 TCTN1Q2MV58 587 aa17.14■□□□□ 0.33
MUC1-202ENST00000338684 TRIM22Q8IYM9 498 aa17.14■□□□□ 0.33
MUC1-202ENST00000338684 PIBF1Q8WXW3 757 aa17.14■□□□□ 0.33
MUC1-202ENST00000338684 SYMPKQ92797 1274 aaKnown RBP17.14■□□□□ 0.33
MUC1-202ENST00000338684 GPKOWQ92917 476 aaPredicted RBP eCLIP17.14■□□□□ 0.33
MUC1-202ENST00000338684 PDCD2LQ9BRP1 358 aa17.14■□□□□ 0.33
MUC1-202ENST00000338684 ALG1Q9BT22 464 aa17.14■□□□□ 0.33
MUC1-202ENST00000338684 FTOQ9C0B1 505 aaKnown RBP eCLIP17.14■□□□□ 0.33
MUC1-202ENST00000338684 CERS4Q9HA82 394 aa17.14■□□□□ 0.33
MUC1-202ENST00000338684 NOD1Q9Y239 953 aa17.14■□□□□ 0.33
MUC1-202ENST00000338684 V9GY48 417 aaPredicted RBP17.14■□□□□ 0.33
MUC1-202ENST00000338684 HAS3O00219 553 aa17.13■□□□□ 0.33
MUC1-202ENST00000338684 PRPF3O43395 683 aaKnown RBP17.13■□□□□ 0.33
MUC1-202ENST00000338684 LARGE1O95461 756 aa17.13■□□□□ 0.33
MUC1-202ENST00000338684 MYCLP12524 364 aaPredicted RBP17.13■□□□□ 0.33
MUC1-202ENST00000338684 ACTN1P12814 892 aa17.13■□□□□ 0.33
MUC1-202ENST00000338684 PSEN2P49810 448 aa17.13■□□□□ 0.33
MUC1-202ENST00000338684 ZNF200P98182 395 aaPredicted RBP17.13■□□□□ 0.33
MUC1-202ENST00000338684 SP2Q02086 613 aa17.13■□□□□ 0.33
MUC1-202ENST00000338684 DGKDQ16760 1214 aa17.13■□□□□ 0.33
MUC1-202ENST00000338684 SPRED2Q7Z698 418 aa17.13■□□□□ 0.33
MUC1-202ENST00000338684 TMCO2Q7Z6W1 182 aaPredicted RBP17.13■□□□□ 0.33
MUC1-202ENST00000338684 VSIG10LQ86VR7 867 aa17.13■□□□□ 0.33
MUC1-202ENST00000338684 WNT8BQ93098 351 aa17.13■□□□□ 0.33
MUC1-202ENST00000338684 EMID1Q96A84 441 aaPredicted RBP17.13■□□□□ 0.33
MUC1-202ENST00000338684 RNF26Q9BY78 433 aaPredicted RBP17.13■□□□□ 0.33
MUC1-202ENST00000338684 BCAS3Q9H6U6 928 aa17.13■□□□□ 0.33
MUC1-202ENST00000338684 GTF2IRD1Q9UHL9 959 aa17.13■□□□□ 0.33
MUC1-202ENST00000338684 MRVI1Q9Y6F6 885 aa17.13■□□□□ 0.33
MUC1-202ENST00000338684 REV3LO60673 3130 aa17.13■□□□□ 0.33
MUC1-202ENST00000338684 TANC1Q9C0D5 1861 aa17.12■□□□□ 0.33
MUC1-202ENST00000338684 hCG_1984214I3L0E3 225 aa17.12■□□□□ 0.33
MUC1-202ENST00000338684 ZNF286BP0CG31 522 aa17.12■□□□□ 0.33
MUC1-202ENST00000338684 SSRP1Q08945 709 aaKnown RBP17.12■□□□□ 0.33
MUC1-202ENST00000338684 LAMC2Q13753 1193 aa17.12■□□□□ 0.33
MUC1-202ENST00000338684 PGM5Q15124 567 aa17.12■□□□□ 0.33
MUC1-202ENST00000338684 HSDL1Q3SXM5 330 aa17.12■□□□□ 0.33
MUC1-202ENST00000338684 MYSM1Q5VVJ2 828 aa17.12■□□□□ 0.33
MUC1-202ENST00000338684 HERC6Q8IVU3 1022 aa17.12■□□□□ 0.33
MUC1-202ENST00000338684 DHX37Q8IY37 1157 aaKnown RBP17.12■□□□□ 0.33
MUC1-202ENST00000338684 ZNF713Q8N859 430 aaPredicted RBP17.12■□□□□ 0.33
MUC1-202ENST00000338684 NECAB1Q8N987 351 aa17.12■□□□□ 0.33
MUC1-202ENST00000338684 PHOSPHO2Q8TCD6 241 aa17.12■□□□□ 0.33
MUC1-202ENST00000338684 ATXN2LQ8WWM7 1075 aaKnown RBP17.12■□□□□ 0.33
MUC1-202ENST00000338684 ASB2Q96Q27 587 aa17.12■□□□□ 0.33
MUC1-202ENST00000338684 SLC9A7Q96T83 725 aa17.12■□□□□ 0.33
MUC1-202ENST00000338684 PRRC2BQ5JSZ5 2229 aaKnown RBP17.12■□□□□ 0.33
MUC1-202ENST00000338684 PTPRSQ13332 1948 aa17.11■□□□□ 0.33
MUC1-202ENST00000338684 NBNO60934 754 aa17.11■□□□□ 0.33
MUC1-202ENST00000338684 CKBP12277 381 aa17.11■□□□□ 0.33
MUC1-202ENST00000338684 TAP1Q03518 808 aa17.11■□□□□ 0.33
MUC1-202ENST00000338684 MFSD10Q14728 455 aa17.11■□□□□ 0.33
MUC1-202ENST00000338684 KIAA0753Q2KHM9 967 aa17.11■□□□□ 0.33
MUC1-202ENST00000338684 TRIM71Q2Q1W2 868 aaKnown RBP17.11■□□□□ 0.33
MUC1-202ENST00000338684 KRT40Q6A162 431 aa17.11■□□□□ 0.33
MUC1-202ENST00000338684 TRAF7Q6Q0C0 670 aa17.11■□□□□ 0.33
MUC1-202ENST00000338684 PPTC7Q8NI37 304 aa17.11■□□□□ 0.33
MUC1-202ENST00000338684 CAGE1Q8TC20 777 aa17.11■□□□□ 0.33
MUC1-202ENST00000338684 AFAP1L1Q8TED9 768 aa17.11■□□□□ 0.33
MUC1-202ENST00000338684 PHKBQ93100 1093 aa17.11■□□□□ 0.33
MUC1-202ENST00000338684 SLC26A6Q9BXS9 759 aa17.11■□□□□ 0.33
MUC1-202ENST00000338684 MAP3K20Q9NYL2 800 aaKnown RBP17.11■□□□□ 0.33
MUC1-202ENST00000338684 THEGQ9P2T0 379 aa17.11■□□□□ 0.33
MUC1-202ENST00000338684 hCG_1642624A0A1W2PR95 340 aa17.1■□□□□ 0.33
MUC1-202ENST00000338684 CD2BP2O95400 341 aaKnown RBP17.1■□□□□ 0.33
MUC1-202ENST00000338684 F2P00734 622 aa17.1■□□□□ 0.33
MUC1-202ENST00000338684 HOXD8P13378 290 aaPredicted RBP17.1■□□□□ 0.33
MUC1-202ENST00000338684 SELPP16109 830 aa17.1■□□□□ 0.33
MUC1-202ENST00000338684 RBL2Q08999 1139 aa17.1■□□□□ 0.33
MUC1-202ENST00000338684 PFKFB3Q16875 520 aaPredicted RBP17.1■□□□□ 0.33
MUC1-202ENST00000338684 CELF3Q5SZQ8 465 aaKnown RBP17.1■□□□□ 0.33
MUC1-202ENST00000338684 LRRC8DQ7L1W4 858 aa17.1■□□□□ 0.33
MUC1-202ENST00000338684 FCHSD1Q86WN1 690 aa17.1■□□□□ 0.33
MUC1-202ENST00000338684 MICALL1Q8N3F8 863 aa17.1■□□□□ 0.33
MUC1-202ENST00000338684 C7orf31Q8N865 590 aa17.1■□□□□ 0.33
MUC1-202ENST00000338684 TMX3Q96JJ7 454 aa17.1■□□□□ 0.33
MUC1-202ENST00000338684 LLPHQ9BRT6 129 aaKnown RBP17.1■□□□□ 0.33
MUC1-202ENST00000338684 MTCH2Q9Y6C9 303 aa17.1■□□□□ 0.33
MUC1-202ENST00000338684 STK36Q9NRP7 1315 aa17.1■□□□□ 0.33
MUC1-202ENST00000338684 LCHNA4D1U4 455 aa17.09■□□□□ 0.33
MUC1-202ENST00000338684 PPFIA4O75335 1185 aa17.09■□□□□ 0.33
MUC1-202ENST00000338684 DEXIO95424 95 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms