RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 MMTAG2Q9BU76 263 aaKnown RBP18.66■□□□□ 0.58
SHOX-201ENST00000334060 PANK2Q9BZ23 570 aa18.66■□□□□ 0.58
SHOX-201ENST00000334060 LMBRD1Q9NUN5 540 aa18.66■□□□□ 0.58
SHOX-201ENST00000334060 CFAP45Q9UL16 551 aa18.66■□□□□ 0.58
SHOX-201ENST00000334060 TXNP10599 105 aaKnown RBP18.65■□□□□ 0.58
SHOX-201ENST00000334060 HSDL1Q3SXM5 330 aa18.65■□□□□ 0.58
SHOX-201ENST00000334060 TEX2Q8IWB9 1127 aa18.65■□□□□ 0.58
SHOX-201ENST00000334060 MAF1Q9H063 256 aa18.65■□□□□ 0.58
SHOX-201ENST00000334060 WRAP73Q9P2S5 460 aaPredicted RBP18.65■□□□□ 0.58
SHOX-201ENST00000334060 PTPN22Q9Y2R2 807 aa18.65■□□□□ 0.58
SHOX-201ENST00000334060 MYADML2A6NDP7 307 aa18.64■□□□□ 0.58
SHOX-201ENST00000334060 GGPS1O95749 300 aa18.64■□□□□ 0.58
SHOX-201ENST00000334060 NCAPH2Q6IBW4 605 aa18.64■□□□□ 0.58
SHOX-201ENST00000334060 B3GNT9Q6UX72 402 aa18.64■□□□□ 0.58
SHOX-201ENST00000334060 TRMT1LQ7Z2T5 733 aaKnown RBP18.64■□□□□ 0.58
SHOX-201ENST00000334060 SRPRBQ9Y5M8 271 aaKnown RBP18.64■□□□□ 0.58
SHOX-201ENST00000334060 FARP2O94887 1054 aaPredicted RBP18.64■□□□□ 0.57
SHOX-201ENST00000334060 INHAP05111 366 aa18.64■□□□□ 0.57
SHOX-201ENST00000334060 ICAM3P32942 547 aa18.64■□□□□ 0.57
SHOX-201ENST00000334060 IRF5Q13568 498 aa18.64■□□□□ 0.57
SHOX-201ENST00000334060 MTFR1Q15390 333 aa18.64■□□□□ 0.57
SHOX-201ENST00000334060 NFKBIBQ15653 356 aa18.64■□□□□ 0.57
SHOX-201ENST00000334060 UGCGQ16739 394 aa18.64■□□□□ 0.57
SHOX-201ENST00000334060 XRRA1Q6P2D8 792 aa18.64■□□□□ 0.57
SHOX-201ENST00000334060 ABHD16BQ9H3Z7 469 aa18.64■□□□□ 0.57
SHOX-201ENST00000334060 RGL1Q9NZL6 768 aa18.64■□□□□ 0.57
SHOX-201ENST00000334060 A0A1B0GVL5 298 aa18.63■□□□□ 0.57
SHOX-201ENST00000334060 TMEM150BA6NC51 233 aa18.63■□□□□ 0.57
SHOX-201ENST00000334060 ZBTB39O15060 712 aa18.63■□□□□ 0.57
SHOX-201ENST00000334060 GAS7O60861 476 aa18.63■□□□□ 0.57
SHOX-201ENST00000334060 MCM4P33991 863 aa18.63■□□□□ 0.57
SHOX-201ENST00000334060 SETQ01105 290 aaPredicted RBP18.63■□□□□ 0.57
SHOX-201ENST00000334060 CYP4A11Q02928 519 aa18.63■□□□□ 0.57
SHOX-201ENST00000334060 NIPA1Q7RTP0 329 aa18.63■□□□□ 0.57
SHOX-201ENST00000334060 NLRX1Q86UT6 975 aa18.63■□□□□ 0.57
SHOX-201ENST00000334060 TRIM50Q86XT4 487 aa18.63■□□□□ 0.57
SHOX-201ENST00000334060 KRI1Q8N9T8 703 aaKnown RBP18.63■□□□□ 0.57
SHOX-201ENST00000334060 SYMPKQ92797 1274 aaKnown RBP18.63■□□□□ 0.57
SHOX-201ENST00000334060 SCAND2PQ9GZW5 306 aaPredicted RBP18.63■□□□□ 0.57
SHOX-201ENST00000334060 SLC5A4Q9NY91 659 aa18.63■□□□□ 0.57
SHOX-201ENST00000334060 PCDHA12Q9UN75 941 aa18.63■□□□□ 0.57
SHOX-201ENST00000334060 MARCH6O60337 910 aa18.62■□□□□ 0.57
SHOX-201ENST00000334060 LIG1P18858 919 aa18.62■□□□□ 0.57
SHOX-201ENST00000334060 CNGA1P29973 690 aa18.62■□□□□ 0.57
SHOX-201ENST00000334060 ARHGAP1Q07960 439 aa18.62■□□□□ 0.57
SHOX-201ENST00000334060 ZRSR1Q15695 479 aaKnown RBP18.62■□□□□ 0.57
SHOX-201ENST00000334060 GNPTABQ3T906 1256 aa18.62■□□□□ 0.57
SHOX-201ENST00000334060 DTHD1Q6ZMT9 781 aa18.62■□□□□ 0.57
SHOX-201ENST00000334060 IGSF22Q8N9C0 903 aa18.62■□□□□ 0.57
SHOX-201ENST00000334060 SH2D3AQ9BRG2 576 aa18.62■□□□□ 0.57
SHOX-201ENST00000334060 VTA1Q9NP79 307 aa18.62■□□□□ 0.57
SHOX-201ENST00000334060 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.62■□□□□ 0.57
SHOX-201ENST00000334060 RBM47A0AV96 593 aaKnown RBP18.62■□□□□ 0.57
SHOX-201ENST00000334060 PPP6R2O75170 966 aa18.62■□□□□ 0.57
SHOX-201ENST00000334060 MED24O75448 989 aa18.62■□□□□ 0.57
SHOX-201ENST00000334060 GRK4P32298 578 aa18.62■□□□□ 0.57
SHOX-201ENST00000334060 KCNK18Q7Z418 384 aa18.62■□□□□ 0.57
SHOX-201ENST00000334060 TMEM87AQ8NBN3 555 aa18.62■□□□□ 0.57
SHOX-201ENST00000334060 KCNG4Q8TDN1 519 aa18.62■□□□□ 0.57
SHOX-201ENST00000334060 RTN4Q9NQC3 1192 aaKnown RBP18.62■□□□□ 0.57
SHOX-201ENST00000334060 HOXD10P28358 340 aa18.61■□□□□ 0.57
SHOX-201ENST00000334060 CTCFP49711 727 aaPredicted RBP18.61■□□□□ 0.57
SHOX-201ENST00000334060 BEX3Q00994 111 aa18.61■□□□□ 0.57
SHOX-201ENST00000334060 KARSQ15046 597 aaKnown RBP18.61■□□□□ 0.57
SHOX-201ENST00000334060 MAP3K21Q5TCX8 1036 aa18.61■□□□□ 0.57
SHOX-201ENST00000334060 ATL3Q6DD88 541 aa18.61■□□□□ 0.57
SHOX-201ENST00000334060 PDILTQ8N807 584 aa18.61■□□□□ 0.57
SHOX-201ENST00000334060 BANK1Q8NDB2 785 aa18.61■□□□□ 0.57
SHOX-201ENST00000334060 GPT2Q8TD30 523 aa18.61■□□□□ 0.57
SHOX-201ENST00000334060 SCFD2Q8WU76 684 aa18.61■□□□□ 0.57
SHOX-201ENST00000334060 GNEQ9Y223 722 aaKnown RBP18.61■□□□□ 0.57
SHOX-201ENST00000334060 HMGCRP04035 888 aa18.61■□□□□ 0.57
SHOX-201ENST00000334060 CTTNQ14247 550 aaKnown RBP18.61■□□□□ 0.57
SHOX-201ENST00000334060 CELF3Q5SZQ8 465 aaKnown RBP18.61■□□□□ 0.57
SHOX-201ENST00000334060 PCYT2Q99447 389 aa18.61■□□□□ 0.57
SHOX-201ENST00000334060 JPH1Q9HDC5 661 aaPredicted RBP18.61■□□□□ 0.57
SHOX-201ENST00000334060 CEP131Q9UPN4 1083 aa18.61■□□□□ 0.57
SHOX-201ENST00000334060 GSTTP1A0A1W2PQM5 241 aa18.6■□□□□ 0.57
SHOX-201ENST00000334060 TBX3O15119 743 aa18.6■□□□□ 0.57
SHOX-201ENST00000334060 CTAGE5O15320 804 aa18.6■□□□□ 0.57
SHOX-201ENST00000334060 STAM2O75886 525 aa18.6■□□□□ 0.57
SHOX-201ENST00000334060 PGK1P00558 417 aa18.6■□□□□ 0.57
SHOX-201ENST00000334060 PRPHP41219 470 aa18.6■□□□□ 0.57
SHOX-201ENST00000334060 FXR2P51116 673 aaKnown RBP eCLIP18.6■□□□□ 0.57
SHOX-201ENST00000334060 NDUFA8P51970 172 aa18.6■□□□□ 0.57
SHOX-201ENST00000334060 TNFAIP2Q03169 654 aa18.6■□□□□ 0.57
SHOX-201ENST00000334060 TTLL4Q14679 1199 aa18.6■□□□□ 0.57
SHOX-201ENST00000334060 MFSD14CQ5VZR4 134 aa18.6■□□□□ 0.57
SHOX-201ENST00000334060 CCDC60Q8IWA6 550 aaPredicted RBP18.6■□□□□ 0.57
SHOX-201ENST00000334060 AFG1LQ8WV93 481 aa18.6■□□□□ 0.57
SHOX-201ENST00000334060 FAM20AQ96MK3 541 aa18.6■□□□□ 0.57
SHOX-201ENST00000334060 GBP4Q96PP9 640 aa18.6■□□□□ 0.57
SHOX-201ENST00000334060 TEKT3Q9BXF9 490 aa18.6■□□□□ 0.57
SHOX-201ENST00000334060 UNC93B1Q9H1C4 597 aa18.6■□□□□ 0.57
SHOX-201ENST00000334060 ELP1O95163 1332 aa18.59■□□□□ 0.57
SHOX-201ENST00000334060 POTEB3A0JP26 581 aa18.59■□□□□ 0.57
SHOX-201ENST00000334060 DYNC1LI2O43237 492 aaPredicted RBP18.59■□□□□ 0.57
SHOX-201ENST00000334060 SPATA31C1P0DKV0 1188 aa18.59■□□□□ 0.57
SHOX-201ENST00000334060 ACTR2P61160 394 aa18.59■□□□□ 0.57
SHOX-201ENST00000334060 PSMC6P62333 389 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms