RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 SEMA3EO15041 775 aa12.98□□□□□ -0.33
LIMK2-202ENST00000333611 CCNT1O60563 726 aaKnown RBP12.98□□□□□ -0.33
LIMK2-202ENST00000333611 ATP11AP98196 1134 aa12.98□□□□□ -0.33
LIMK2-202ENST00000333611 RASIP1Q5U651 963 aa12.98□□□□□ -0.33
LIMK2-202ENST00000333611 WDR59Q6PJI9 974 aa12.98□□□□□ -0.33
LIMK2-202ENST00000333611 IFT20Q8IY31 132 aa12.98□□□□□ -0.33
LIMK2-202ENST00000333611 SNRNP27Q8WVK2 155 aaKnown RBP12.98□□□□□ -0.33
LIMK2-202ENST00000333611 CDK5RAP3Q96JB5 506 aa12.98□□□□□ -0.33
LIMK2-202ENST00000333611 ZNF512BQ96KM6 892 aaPredicted RBP12.98□□□□□ -0.33
LIMK2-202ENST00000333611 ATP6V1G3Q96LB4 118 aa12.98□□□□□ -0.33
LIMK2-202ENST00000333611 CAPN6Q9Y6Q1 641 aa12.98□□□□□ -0.33
LIMK2-202ENST00000333611 SIPA1L3O60292 1781 aaPredicted RBP12.98□□□□□ -0.33
LIMK2-202ENST00000333611 TNS3Q68CZ2 1445 aa12.98□□□□□ -0.33
LIMK2-202ENST00000333611 KIF13AQ9H1H9 1805 aa12.98□□□□□ -0.33
LIMK2-202ENST00000333611 ITIH6Q6UXX5 1313 aa12.98□□□□□ -0.33
LIMK2-202ENST00000333611 CNTNAP5Q8WYK1 1306 aa12.98□□□□□ -0.33
LIMK2-202ENST00000333611 USP17L3A6NCW0 530 aa12.97□□□□□ -0.33
LIMK2-202ENST00000333611 USP17L4A6NCW7 530 aa12.97□□□□□ -0.33
LIMK2-202ENST00000333611 SPDYE5A6NIY4 337 aa12.97□□□□□ -0.33
LIMK2-202ENST00000333611 NUTM2BA6NNL0 878 aaPredicted RBP12.97□□□□□ -0.33
LIMK2-202ENST00000333611 NUTM2EB1AL46 878 aaPredicted RBP12.97□□□□□ -0.33
LIMK2-202ENST00000333611 ATP6V1G1O75348 118 aa12.97□□□□□ -0.33
LIMK2-202ENST00000333611 CALM1P0DP23 149 aa12.97□□□□□ -0.33
LIMK2-202ENST00000333611 CALM2P0DP24 149 aa12.97□□□□□ -0.33
LIMK2-202ENST00000333611 CALM3P0DP25 149 aa12.97□□□□□ -0.33
LIMK2-202ENST00000333611 PLCG1P19174 1290 aa12.97□□□□□ -0.33
LIMK2-202ENST00000333611 KLRK1P26718 216 aa12.97□□□□□ -0.33
LIMK2-202ENST00000333611 PRDX5P30044 214 aa12.97□□□□□ -0.33
LIMK2-202ENST00000333611 ABCD1P33897 745 aa12.97□□□□□ -0.33
LIMK2-202ENST00000333611 TXKP42681 527 aa12.97□□□□□ -0.33
LIMK2-202ENST00000333611 DNM2P50570 870 aa12.97□□□□□ -0.33
LIMK2-202ENST00000333611 LRRC41Q15345 812 aa12.97□□□□□ -0.33
LIMK2-202ENST00000333611 USP17L1Q7RTZ2 530 aa12.97□□□□□ -0.33
LIMK2-202ENST00000333611 SLC44A5Q8NCS7 719 aa12.97□□□□□ -0.33
LIMK2-202ENST00000333611 SPATA4Q8NEY3 305 aa12.97□□□□□ -0.33
LIMK2-202ENST00000333611 ZNF570Q96NI8 536 aa12.97□□□□□ -0.33
LIMK2-202ENST00000333611 PSMD1Q99460 953 aa12.97□□□□□ -0.33
LIMK2-202ENST00000333611 MLXIPLQ9NP71 852 aa12.97□□□□□ -0.33
LIMK2-202ENST00000333611 TBC1D7Q9P0N9 293 aa12.97□□□□□ -0.33
LIMK2-202ENST00000333611 DPPA5A6NC42 116 aa12.97□□□□□ -0.33
LIMK2-202ENST00000333611 HIP1RO75146 1068 aa12.97□□□□□ -0.33
LIMK2-202ENST00000333611 MAGOHP61326 146 aaKnown RBP12.97□□□□□ -0.33
LIMK2-202ENST00000333611 KCNJ2P63252 427 aa12.97□□□□□ -0.33
LIMK2-202ENST00000333611 ICA1Q05084 483 aa12.97□□□□□ -0.33
LIMK2-202ENST00000333611 STK4Q13043 487 aa12.97□□□□□ -0.33
LIMK2-202ENST00000333611 TRADDQ15628 312 aa12.97□□□□□ -0.33
LIMK2-202ENST00000333611 ADSSL1Q8N142 457 aa12.97□□□□□ -0.33
LIMK2-202ENST00000333611 MAGOHBQ96A72 148 aaKnown RBP12.97□□□□□ -0.33
LIMK2-202ENST00000333611 ZNF233A6NK53 670 aa12.97□□□□□ -0.33
LIMK2-202ENST00000333611 A6NNZ2 444 aa12.97□□□□□ -0.33
LIMK2-202ENST00000333611 NAPAP54920 295 aa12.97□□□□□ -0.33
LIMK2-202ENST00000333611 CCDC6Q16204 474 aa12.97□□□□□ -0.33
LIMK2-202ENST00000333611 TUBB8Q3ZCM7 444 aa12.97□□□□□ -0.33
LIMK2-202ENST00000333611 ALS2CLQ60I27 953 aa12.97□□□□□ -0.33
LIMK2-202ENST00000333611 ANKRD40Q6AI12 368 aa12.97□□□□□ -0.33
LIMK2-202ENST00000333611 TMEM154Q6P9G4 183 aa12.97□□□□□ -0.33
LIMK2-202ENST00000333611 CABP7Q86V35 215 aa12.97□□□□□ -0.33
LIMK2-202ENST00000333611 DZIP1Q86YF9 867 aaKnown RBP12.97□□□□□ -0.33
LIMK2-202ENST00000333611 CCDC155Q8N6L0 562 aa12.97□□□□□ -0.33
LIMK2-202ENST00000333611 BSDC1Q9NW68 430 aaPredicted RBP12.97□□□□□ -0.33
LIMK2-202ENST00000333611 RASSF10A6NK89 507 aa12.96□□□□□ -0.33
LIMK2-202ENST00000333611 CETN3O15182 167 aa12.96□□□□□ -0.33
LIMK2-202ENST00000333611 PPFIA2O75334 1257 aa12.96□□□□□ -0.33
LIMK2-202ENST00000333611 RTN3O95197 1032 aaPredicted RBP12.96□□□□□ -0.33
LIMK2-202ENST00000333611 EIF4A3P38919 411 aaKnown RBP12.96□□□□□ -0.33
LIMK2-202ENST00000333611 RASSF7Q02833 373 aa12.96□□□□□ -0.33
LIMK2-202ENST00000333611 DEUP1Q05D60 604 aa12.96□□□□□ -0.33
LIMK2-202ENST00000333611 FUT2Q10981 343 aa12.96□□□□□ -0.33
LIMK2-202ENST00000333611 PPP1R15BQ5SWA1 713 aa12.96□□□□□ -0.33
LIMK2-202ENST00000333611 TLDC1Q6P9B6 456 aa12.96□□□□□ -0.33
LIMK2-202ENST00000333611 PNMA1Q8ND90 353 aa12.96□□□□□ -0.33
LIMK2-202ENST00000333611 FBF1Q8TES7 1133 aa12.96□□□□□ -0.33
LIMK2-202ENST00000333611 DDX23Q9BUQ8 820 aaKnown RBP12.96□□□□□ -0.33
LIMK2-202ENST00000333611 PNPLA7Q6ZV29 1317 aa12.96□□□□□ -0.33
LIMK2-202ENST00000333611 C4AP0C0L4 1744 aa12.96□□□□□ -0.33
LIMK2-202ENST00000333611 C4BP0C0L5 1744 aa12.96□□□□□ -0.33
LIMK2-202ENST00000333611 DDX42Q86XP3 938 aaKnown RBP eCLIP12.96□□□□□ -0.33
LIMK2-202ENST00000333611 CRNKL1Q9BZJ0 848 aaKnown RBP12.96□□□□□ -0.33
LIMK2-202ENST00000333611 PACSIN2Q9UNF0 486 aaPredicted RBP12.96□□□□□ -0.33
LIMK2-202ENST00000333611 CREB3O43889 395 aa12.96□□□□□ -0.34
LIMK2-202ENST00000333611 TRIM37O94972 964 aa12.96□□□□□ -0.34
LIMK2-202ENST00000333611 MAGEA1P43355 309 aa12.96□□□□□ -0.34
LIMK2-202ENST00000333611 ADCY1Q08828 1119 aa12.96□□□□□ -0.34
LIMK2-202ENST00000333611 NPY5RQ15761 445 aa12.96□□□□□ -0.34
LIMK2-202ENST00000333611 AENQ8WTP8 325 aaKnown RBP12.96□□□□□ -0.34
LIMK2-202ENST00000333611 RBM12Q9NTZ6 932 aaKnown RBP12.96□□□□□ -0.34
LIMK2-202ENST00000333611 CAPN11Q9UMQ6 739 aa12.96□□□□□ -0.34
LIMK2-202ENST00000333611 PSMD14O00487 310 aa12.95□□□□□ -0.34
LIMK2-202ENST00000333611 TSPY3P0CV98 308 aa12.95□□□□□ -0.34
LIMK2-202ENST00000333611 TSPY8P0CW00 308 aa12.95□□□□□ -0.34
LIMK2-202ENST00000333611 CALML3P27482 149 aa12.95□□□□□ -0.34
LIMK2-202ENST00000333611 SOGA3Q5TF21 947 aa12.95□□□□□ -0.34
LIMK2-202ENST00000333611 BRINP3Q76B58 766 aa12.95□□□□□ -0.34
LIMK2-202ENST00000333611 ARHGEF10LQ9HCE6 1279 aa12.95□□□□□ -0.34
LIMK2-202ENST00000333611 ZC3H4Q9UPT8 1303 aaKnown RBP12.95□□□□□ -0.34
LIMK2-202ENST00000333611 SPDYE3A6NKU9 549 aa12.95□□□□□ -0.34
LIMK2-202ENST00000333611 SMNDC1O75940 238 aaKnown RBP eCLIP12.95□□□□□ -0.34
LIMK2-202ENST00000333611 TXNRD1Q16881 649 aa12.95□□□□□ -0.34
LIMK2-202ENST00000333611 MUM1Q2TAK8 710 aa12.95□□□□□ -0.34
LIMK2-202ENST00000333611 CCDC38Q502W7 563 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms