RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 CERS5Q8N5B7 392 aa16.98■□□□□ 0.31
BRCC3-201ENST00000330045 ANKRD13CQ8N6S4 541 aa16.98■□□□□ 0.31
BRCC3-201ENST00000330045 HAS1Q92839 578 aa16.98■□□□□ 0.31
BRCC3-201ENST00000330045 PSMB7Q99436 277 aa16.98■□□□□ 0.31
BRCC3-201ENST00000330045 DMGDHQ9UI17 866 aaKnown RBP16.98■□□□□ 0.31
BRCC3-201ENST00000330045 LCMT1Q9UIC8 334 aa16.98■□□□□ 0.31
BRCC3-201ENST00000330045 TRAF5O00463 557 aa16.97■□□□□ 0.31
BRCC3-201ENST00000330045 MARCH6O60337 910 aa16.97■□□□□ 0.31
BRCC3-201ENST00000330045 MATR3P43243 847 aaKnown RBP eCLIP16.97■□□□□ 0.311e-6■■■■□ 22.8
BRCC3-201ENST00000330045 RASSF7Q02833 373 aa16.97■□□□□ 0.31
BRCC3-201ENST00000330045 GABPAQ06546 454 aa16.97■□□□□ 0.31
BRCC3-201ENST00000330045 CCDC40Q4G0X9 1142 aa16.97■□□□□ 0.31
BRCC3-201ENST00000330045 ZCWPW2Q504Y3 356 aa16.97■□□□□ 0.31
BRCC3-201ENST00000330045 TDRD12Q587J7 1177 aaKnown RBP16.97■□□□□ 0.31
BRCC3-201ENST00000330045 HGSNATQ68CP4 663 aa16.97■□□□□ 0.31
BRCC3-201ENST00000330045 PANK4Q9NVE7 773 aa16.97■□□□□ 0.31
BRCC3-201ENST00000330045 STK32BQ9NY57 414 aa16.97■□□□□ 0.31
BRCC3-201ENST00000330045 DAGLAQ9Y4D2 1042 aa16.97■□□□□ 0.31
BRCC3-201ENST00000330045 IGKV6D-41A0A0C4DH26 115 aa16.97■□□□□ 0.31
BRCC3-201ENST00000330045 GOLGA6BA6NDN3 693 aa16.97■□□□□ 0.31
BRCC3-201ENST00000330045 MYO1CO00159 1063 aa16.97■□□□□ 0.31
BRCC3-201ENST00000330045 PAFAH1B1P43034 410 aa16.97■□□□□ 0.31
BRCC3-201ENST00000330045 CLK2P49760 499 aaKnown RBP16.97■□□□□ 0.31
BRCC3-201ENST00000330045 ZNF543Q08ER8 600 aa16.97■□□□□ 0.31
BRCC3-201ENST00000330045 FAM26FQ5R3K3 315 aa16.97■□□□□ 0.31
BRCC3-201ENST00000330045 CLEC10AQ8IUN9 316 aa16.97■□□□□ 0.31
BRCC3-201ENST00000330045 NLRC4Q9NPP4 1024 aa16.97■□□□□ 0.31
BRCC3-201ENST00000330045 BMP2KQ9NSY1 1161 aaPredicted RBP16.97■□□□□ 0.31
BRCC3-201ENST00000330045 CEP72Q9P209 647 aa16.97■□□□□ 0.31
BRCC3-201ENST00000330045 PCDHA12Q9UN75 941 aa16.97■□□□□ 0.31
BRCC3-201ENST00000330045 RRP15Q9Y3B9 282 aaKnown RBP16.97■□□□□ 0.31
BRCC3-201ENST00000330045 MYH10P35580 1976 aa16.97■□□□□ 0.31
BRCC3-201ENST00000330045 PPP1R11O60927 126 aaPredicted RBP16.96■□□□□ 0.31
BRCC3-201ENST00000330045 TTLL1O95922 423 aa16.96■□□□□ 0.31
BRCC3-201ENST00000330045 FOXR1Q6PIV2 292 aa16.96■□□□□ 0.31
BRCC3-201ENST00000330045 RNF10Q8N5U6 811 aaKnown RBP16.96■□□□□ 0.31
BRCC3-201ENST00000330045 CUL5Q93034 780 aa16.96■□□□□ 0.31
BRCC3-201ENST00000330045 MTMR8Q96EF0 704 aa16.96■□□□□ 0.31
BRCC3-201ENST00000330045 NOX5Q96PH1 765 aa16.96■□□□□ 0.31
BRCC3-201ENST00000330045 NUCKS1Q9H1E3 243 aaKnown RBP16.96■□□□□ 0.31
BRCC3-201ENST00000330045 DBNDD1Q9H9R9 158 aa16.96■□□□□ 0.31
BRCC3-201ENST00000330045 NCK2O43639 380 aa16.96■□□□□ 0.31
BRCC3-201ENST00000330045 SLC1A4P43007 532 aa16.96■□□□□ 0.31
BRCC3-201ENST00000330045 MRPL12P52815 198 aaKnown RBP16.96■□□□□ 0.31
BRCC3-201ENST00000330045 SLC7A5Q01650 507 aa16.96■□□□□ 0.31
BRCC3-201ENST00000330045 SLC9C1Q4G0N8 1177 aa16.96■□□□□ 0.31
BRCC3-201ENST00000330045 KLHDC7AQ5VTJ3 777 aa16.96■□□□□ 0.31
BRCC3-201ENST00000330045 SND1Q7KZF4 910 aaKnown RBP eCLIP16.96■□□□□ 0.31
BRCC3-201ENST00000330045 GJA10Q969M2 543 aa16.96■□□□□ 0.31
BRCC3-201ENST00000330045 TLR10Q9BXR5 811 aa16.96■□□□□ 0.31
BRCC3-201ENST00000330045 NT5C3AQ9H0P0 336 aa16.96■□□□□ 0.31
BRCC3-201ENST00000330045 TMEM51Q9NW97 253 aa16.96■□□□□ 0.31
BRCC3-201ENST00000330045 SLX4Q8IY92 1834 aa16.96■□□□□ 0.31
BRCC3-201ENST00000330045 RBAK-RBAKDNI3L0D1 243 aa16.95■□□□□ 0.3
BRCC3-201ENST00000330045 BUB1O43683 1085 aa16.95■□□□□ 0.3
BRCC3-201ENST00000330045 SSBP05455 408 aaKnown RBP eCLIP16.95■□□□□ 0.3
BRCC3-201ENST00000330045 NAP1L1P55209 391 aaKnown RBP16.95■□□□□ 0.3
BRCC3-201ENST00000330045 FAM83BQ5T0W9 1011 aa16.95■□□□□ 0.3
BRCC3-201ENST00000330045 SFMBT2Q5VUG0 894 aa16.95■□□□□ 0.3
BRCC3-201ENST00000330045 TTBK2Q6IQ55 1244 aa16.95■□□□□ 0.3
BRCC3-201ENST00000330045 SYN2Q92777 582 aaPredicted RBP16.95■□□□□ 0.3
BRCC3-201ENST00000330045 CEP63Q96MT8 703 aa16.95■□□□□ 0.3
BRCC3-201ENST00000330045 SMARCAL1Q9NZC9 954 aa16.95■□□□□ 0.3
BRCC3-201ENST00000330045 EHD2Q9NZN4 543 aa16.95■□□□□ 0.3
BRCC3-201ENST00000330045 NOL4O94818 638 aa16.95■□□□□ 0.3
BRCC3-201ENST00000330045 SERPING1P05155 500 aa16.95■□□□□ 0.3
BRCC3-201ENST00000330045 GCFC2P16383 781 aaKnown RBP16.95■□□□□ 0.3
BRCC3-201ENST00000330045 ALDH1B1P30837 517 aa16.95■□□□□ 0.3
BRCC3-201ENST00000330045 ZC3H12CQ9C0D7 883 aaKnown RBP16.95■□□□□ 0.3
BRCC3-201ENST00000330045 TBC1D7Q9P0N9 293 aa16.95■□□□□ 0.3
BRCC3-201ENST00000330045 TSKSQ9UJT2 592 aa16.95■□□□□ 0.3
BRCC3-201ENST00000330045 C10orf71Q711Q0 1435 aa16.94■□□□□ 0.3
BRCC3-201ENST00000330045 KDM3AQ9Y4C1 1321 aa16.94■□□□□ 0.3
BRCC3-201ENST00000330045 MRPS25P82663 173 aaKnown RBP16.94■□□□□ 0.3
BRCC3-201ENST00000330045 HYIQ5T013 277 aa16.94■□□□□ 0.3
BRCC3-201ENST00000330045 HAUS3Q68CZ6 603 aa16.94■□□□□ 0.3
BRCC3-201ENST00000330045 CCDC65Q8IXS2 484 aa16.94■□□□□ 0.3
BRCC3-201ENST00000330045 FBXO41Q8TF61 875 aa16.94■□□□□ 0.3
BRCC3-201ENST00000330045 LSM14BQ9BX40 385 aaKnown RBP16.94■□□□□ 0.3
BRCC3-201ENST00000330045 STIM2Q9P246 746 aa16.94■□□□□ 0.3
BRCC3-201ENST00000330045 TLR2O60603 784 aa16.94■□□□□ 0.3
BRCC3-201ENST00000330045 GNA14O95837 355 aa16.94■□□□□ 0.3
BRCC3-201ENST00000330045 SLC16A2P36021 539 aa16.94■□□□□ 0.3
BRCC3-201ENST00000330045 SCNN1DP51172 638 aa16.94■□□□□ 0.3
BRCC3-201ENST00000330045 EPHB4P54760 987 aa16.94■□□□□ 0.3
BRCC3-201ENST00000330045 POLR2FP61218 127 aaKnown RBP16.94■□□□□ 0.3
BRCC3-201ENST00000330045 SLC20A2Q08357 652 aa16.94■□□□□ 0.3
BRCC3-201ENST00000330045 FAM76AQ8TAV0 307 aa16.94■□□□□ 0.3
BRCC3-201ENST00000330045 FGFBP2Q9BYJ0 223 aa16.94■□□□□ 0.3
BRCC3-201ENST00000330045 PSTPIP2Q9H939 334 aa16.94■□□□□ 0.3
BRCC3-201ENST00000330045 PCDHAC2Q9Y5I4 1007 aa16.94■□□□□ 0.3
BRCC3-201ENST00000330045 GOLGA6CA6NDK9 693 aa16.93■□□□□ 0.3
BRCC3-201ENST00000330045 E9PMD0 336 aa16.93■□□□□ 0.3
BRCC3-201ENST00000330045 H0YIN7 160 aa16.93■□□□□ 0.3
BRCC3-201ENST00000330045 ZBTB5O15062 677 aa16.93■□□□□ 0.3
BRCC3-201ENST00000330045 GOLGA6DP0CG33 693 aa16.93■□□□□ 0.3
BRCC3-201ENST00000330045 GPATCH4Q5T3I0 446 aaKnown RBP16.93■□□□□ 0.3
BRCC3-201ENST00000330045 NELFCDQ8IXH7 590 aa16.93■□□□□ 0.3
BRCC3-201ENST00000330045 C10orf67Q8IYJ2 551 aa16.93■□□□□ 0.3
BRCC3-201ENST00000330045 LUC7LQ9NQ29 371 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms