RNA–Protein interactions for RNA: ENST00000329629.8

FNDC1-202, Transcript of fibronectin type III domain containing 1, humanhuman

TSL 1 (best)

Gene FNDC1, Length 6,034 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-202ENST00000329629 BASP1P80723 227 aaKnown RBP15.27■□□□□ 0.04
FNDC1-202ENST00000329629 CACNB1Q02641 598 aaPredicted RBP15.27■□□□□ 0.04
FNDC1-202ENST00000329629 PLA2G4DQ86XP0 818 aa15.27■□□□□ 0.04
FNDC1-202ENST00000329629 MAP7D3Q8IWC1 876 aa15.27■□□□□ 0.04
FNDC1-202ENST00000329629 PNMA1Q8ND90 353 aa15.27■□□□□ 0.04
FNDC1-202ENST00000329629 THOC1Q96FV9 657 aaKnown RBP15.27■□□□□ 0.04
FNDC1-202ENST00000329629 EFHD1Q9BUP0 239 aa15.27■□□□□ 0.04
FNDC1-202ENST00000329629 USP44Q9H0E7 712 aa15.27■□□□□ 0.04
FNDC1-202ENST00000329629 ACTR5Q9H9F9 607 aaPredicted RBP15.27■□□□□ 0.04
FNDC1-202ENST00000329629 PACSIN2Q9UNF0 486 aaPredicted RBP15.27■□□□□ 0.04
FNDC1-202ENST00000329629 IGSF1Q8N6C5 1336 aa15.27■□□□□ 0.04
FNDC1-202ENST00000329629 AFF2P51816 1311 aa15.27■□□□□ 0.04
FNDC1-202ENST00000329629 KLRF2D3W0D1 207 aa15.27■□□□□ 0.04
FNDC1-202ENST00000329629 LRRN2O75325 713 aa15.27■□□□□ 0.04
FNDC1-202ENST00000329629 POLGP54098 1239 aaPredicted RBP15.27■□□□□ 0.04
FNDC1-202ENST00000329629 GYS2P54840 703 aa15.27■□□□□ 0.04
FNDC1-202ENST00000329629 POLA2Q14181 598 aa15.27■□□□□ 0.04
FNDC1-202ENST00000329629 TMEM259Q4ZIN3 620 aa15.27■□□□□ 0.04
FNDC1-202ENST00000329629 EIF2AQ9BY44 585 aaKnown RBP15.27■□□□□ 0.04
FNDC1-202ENST00000329629 MED23Q9ULK4 1368 aa15.27■□□□□ 0.03
FNDC1-202ENST00000329629 BBOX1O75936 387 aa15.27■□□□□ 0.03
FNDC1-202ENST00000329629 PDIA3P30101 505 aaKnown RBP15.27■□□□□ 0.03
FNDC1-202ENST00000329629 TBC1D1Q86TI0 1168 aaPredicted RBP15.27■□□□□ 0.03
FNDC1-202ENST00000329629 PCDHA5Q9Y5H7 936 aa15.27■□□□□ 0.03
FNDC1-202ENST00000329629 MAP3K4Q9Y6R4 1608 aa15.27■□□□□ 0.03
FNDC1-202ENST00000329629 ERBB3P21860 1342 aa15.27■□□□□ 0.03
FNDC1-202ENST00000329629 CLRN2A0PK11 232 aa15.27■□□□□ 0.03
FNDC1-202ENST00000329629 PDE6AP16499 860 aa15.27■□□□□ 0.03
FNDC1-202ENST00000329629 NR1D1P20393 614 aa15.27■□□□□ 0.03
FNDC1-202ENST00000329629 HDLBPQ00341 1268 aaKnown RBP15.27■□□□□ 0.03
FNDC1-202ENST00000329629 ICA1Q05084 483 aa15.27■□□□□ 0.03
FNDC1-202ENST00000329629 CACTINQ8WUQ7 758 aaKnown RBP15.27■□□□□ 0.03
FNDC1-202ENST00000329629 AP1M1Q9BXS5 423 aa15.27■□□□□ 0.03
FNDC1-202ENST00000329629 MIS12Q9H081 205 aa15.27■□□□□ 0.03
FNDC1-202ENST00000329629 CNOT10Q9H9A5 744 aaKnown RBP15.27■□□□□ 0.03
FNDC1-202ENST00000329629 IGBP1P78318 339 aa15.26■□□□□ 0.03
FNDC1-202ENST00000329629 CCNYQ8ND76 341 aa15.26■□□□□ 0.03
FNDC1-202ENST00000329629 CENPKQ9BS16 269 aa15.26■□□□□ 0.03
FNDC1-202ENST00000329629 MRPL11Q9Y3B7 192 aaKnown RBP15.26■□□□□ 0.03
FNDC1-202ENST00000329629 EIF3CLB5ME19 914 aaKnown RBP15.26■□□□□ 0.03
FNDC1-202ENST00000329629 CEP70Q8NHQ1 597 aa15.26■□□□□ 0.03
FNDC1-202ENST00000329629 EIF3CQ99613 913 aaKnown RBP15.26■□□□□ 0.03
FNDC1-202ENST00000329629 AFPP02771 609 aaKnown RBP15.26■□□□□ 0.03
FNDC1-202ENST00000329629 SRGAP2BP0DMP2 458 aa15.26■□□□□ 0.03
FNDC1-202ENST00000329629 HIPK4Q8NE63 616 aa15.26■□□□□ 0.03
FNDC1-202ENST00000329629 DEPDC1BQ8WUY9 529 aa15.26■□□□□ 0.03
FNDC1-202ENST00000329629 PGBD1Q96JS3 809 aa15.26■□□□□ 0.03
FNDC1-202ENST00000329629 NT5C1BQ96P26 610 aa15.26■□□□□ 0.03
FNDC1-202ENST00000329629 APOL6Q9BWW8 343 aa15.26■□□□□ 0.03
FNDC1-202ENST00000329629 ESRRAP11474 423 aaPredicted RBP15.26■□□□□ 0.03
FNDC1-202ENST00000329629 NR2F2P24468 414 aa15.26■□□□□ 0.03
FNDC1-202ENST00000329629 DARS2Q6PI48 645 aaKnown RBP15.26■□□□□ 0.03
FNDC1-202ENST00000329629 TSC22D3Q99576 134 aa15.26■□□□□ 0.03
FNDC1-202ENST00000329629 ADPGKQ9BRR6 497 aa15.26■□□□□ 0.03
FNDC1-202ENST00000329629 DBNDD1Q9H9R9 158 aa15.26■□□□□ 0.03
FNDC1-202ENST00000329629 ABCB6Q9NP58 842 aa15.26■□□□□ 0.03
FNDC1-202ENST00000329629 PALM3A6NDB9 673 aaPredicted RBP15.26■□□□□ 0.03
FNDC1-202ENST00000329629 SPDYE2BA6NHP3 402 aa15.26■□□□□ 0.03
FNDC1-202ENST00000329629 SPDYE6P0CI01 402 aa15.26■□□□□ 0.03
FNDC1-202ENST00000329629 ODR4Q5SWX8 454 aa15.26■□□□□ 0.03
FNDC1-202ENST00000329629 SEPT8Q92599 483 aa15.26■□□□□ 0.03
FNDC1-202ENST00000329629 NHEJ1Q9H9Q4 299 aaPredicted RBP15.26■□□□□ 0.03
FNDC1-202ENST00000329629 ABCF3Q9NUQ8 709 aa15.26■□□□□ 0.03
FNDC1-202ENST00000329629 DNAJC17Q9NVM6 304 aaKnown RBP15.26■□□□□ 0.03
FNDC1-202ENST00000329629 MAN1B1Q9UKM7 699 aa15.26■□□□□ 0.03
FNDC1-202ENST00000329629 TADA3O75528 432 aa15.25■□□□□ 0.03
FNDC1-202ENST00000329629 ABCB5Q2M3G0 1257 aa15.25■□□□□ 0.03
FNDC1-202ENST00000329629 GRAMD1BQ3KR37 738 aa15.25■□□□□ 0.03
FNDC1-202ENST00000329629 ST13P4Q8IZP2 240 aaPredicted RBP15.25■□□□□ 0.03
FNDC1-202ENST00000329629 TRIML2Q8N7C3 387 aa15.25■□□□□ 0.03
FNDC1-202ENST00000329629 DNAAF3Q8N9W5 541 aa15.25■□□□□ 0.03
FNDC1-202ENST00000329629 TRAIPQ9BWF2 469 aa15.25■□□□□ 0.03
FNDC1-202ENST00000329629 SPTLC3Q9NUV7 552 aa15.25■□□□□ 0.03
FNDC1-202ENST00000329629 GOLGA8SH3BPF8 625 aa15.25■□□□□ 0.03
FNDC1-202ENST00000329629 KRT10P13645 584 aa15.25■□□□□ 0.03
FNDC1-202ENST00000329629 ARHGEF6Q15052 776 aa15.25■□□□□ 0.03
FNDC1-202ENST00000329629 SPOPLQ6IQ16 392 aa15.25■□□□□ 0.03
FNDC1-202ENST00000329629 FBXO11Q86XK2 927 aa15.25■□□□□ 0.03
FNDC1-202ENST00000329629 CCDC124Q96CT7 223 aaKnown RBP15.25■□□□□ 0.03
FNDC1-202ENST00000329629 RTEL1Q9NZ71 1219 aa15.25■□□□□ 0.03
FNDC1-202ENST00000329629 ANKRD65E5RJM6 399 aa15.25■□□□□ 0.03
FNDC1-202ENST00000329629 MCF2LO15068 1137 aa15.25■□□□□ 0.03
FNDC1-202ENST00000329629 GFPT2O94808 682 aa15.25■□□□□ 0.03
FNDC1-202ENST00000329629 RFX1P22670 979 aa15.25■□□□□ 0.03
FNDC1-202ENST00000329629 CLIC2O15247 247 aa15.25■□□□□ 0.03
FNDC1-202ENST00000329629 PDE8BO95263 885 aa15.25■□□□□ 0.03
FNDC1-202ENST00000329629 MCF2L2Q86YR7 1114 aa15.25■□□□□ 0.03
FNDC1-202ENST00000329629 SSH3Q8TE77 659 aa15.25■□□□□ 0.03
FNDC1-202ENST00000329629 TUBB6Q9BUF5 446 aa15.25■□□□□ 0.03
FNDC1-202ENST00000329629 DDAH1O94760 285 aa15.25■□□□□ 0.03
FNDC1-202ENST00000329629 CASP8Q14790 479 aa15.25■□□□□ 0.03
FNDC1-202ENST00000329629 PROSER3Q2NL68 480 aa15.25■□□□□ 0.03
FNDC1-202ENST00000329629 P2RX5Q93086 422 aa15.25■□□□□ 0.03
FNDC1-202ENST00000329629 ABCC4O15439 1325 aa15.24■□□□□ 0.03
FNDC1-202ENST00000329629 EXOC1LA0A1B0GW35 172 aa15.24■□□□□ 0.03
FNDC1-202ENST00000329629 RASGRF2O14827 1237 aa15.24■□□□□ 0.03
FNDC1-202ENST00000329629 SEMA3EO15041 775 aa15.24■□□□□ 0.03
FNDC1-202ENST00000329629 MRPS25P82663 173 aaKnown RBP15.24■□□□□ 0.03
FNDC1-202ENST00000329629 RNF217Q8TC41 542 aa15.24■□□□□ 0.03
FNDC1-202ENST00000329629 DYDC2Q96IM9 177 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms