RNA–Protein interactions for RNA: ENST00000328834.9

CNOT10-201, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT10, Length 2,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-201ENST00000328834 TNRC6CQ9HCJ0 1690 aaKnown RBP16.35■□□□□ 0.21
CNOT10-201ENST00000328834 DDX60LQ5H9U9 1706 aaKnown RBP16.35■□□□□ 0.21
CNOT10-201ENST00000328834 A0A1W2PQJ5 194 aa16.35■□□□□ 0.21
CNOT10-201ENST00000328834 MYL1P05976 194 aa16.35■□□□□ 0.21
CNOT10-201ENST00000328834 RFC4P35249 363 aa16.35■□□□□ 0.21
CNOT10-201ENST00000328834 KCNA1Q09470 495 aa16.35■□□□□ 0.21
CNOT10-201ENST00000328834 TMEM266Q2M3C6 531 aa16.35■□□□□ 0.21
CNOT10-201ENST00000328834 ZNF804AQ7Z570 1209 aa16.35■□□□□ 0.21
CNOT10-201ENST00000328834 MMGT1Q8N4V1 131 aa16.35■□□□□ 0.21
CNOT10-201ENST00000328834 CUEDC2Q9H467 287 aa16.35■□□□□ 0.21
CNOT10-201ENST00000328834 LRRC4CQ9HCJ2 640 aa16.35■□□□□ 0.21
CNOT10-201ENST00000328834 AJAP1Q9UKB5 411 aaPredicted RBP16.35■□□□□ 0.21
CNOT10-201ENST00000328834 GRIN2DO15399 1336 aa16.35■□□□□ 0.21
CNOT10-201ENST00000328834 PAFAH1B1P43034 410 aa16.35■□□□□ 0.21
CNOT10-201ENST00000328834 CYP4A11Q02928 519 aa16.35■□□□□ 0.21
CNOT10-201ENST00000328834 GRAPQ13588 217 aa16.35■□□□□ 0.21
CNOT10-201ENST00000328834 FAM26FQ5R3K3 315 aa16.35■□□□□ 0.21
CNOT10-201ENST00000328834 GALNT17Q6IS24 598 aa16.35■□□□□ 0.21
CNOT10-201ENST00000328834 ADAT2Q7Z6V5 191 aaKnown RBP16.35■□□□□ 0.21
CNOT10-201ENST00000328834 GPBP1Q86WP2 473 aa16.35■□□□□ 0.21
CNOT10-201ENST00000328834 KSR1Q8IVT5 923 aa16.35■□□□□ 0.21
CNOT10-201ENST00000328834 ZFPM1Q8IX07 1006 aa16.35■□□□□ 0.21
CNOT10-201ENST00000328834 FNBP4Q8N3X1 1017 aaPredicted RBP16.35■□□□□ 0.21
CNOT10-201ENST00000328834 GUF1Q8N442 669 aaKnown RBP16.35■□□□□ 0.21
CNOT10-201ENST00000328834 GRAPLQ8TC17 118 aaPredicted RBP16.35■□□□□ 0.21
CNOT10-201ENST00000328834 CASKIN2Q8WXE0 1202 aa16.35■□□□□ 0.21
CNOT10-201ENST00000328834 NOX5Q96PH1 765 aa16.35■□□□□ 0.21
CNOT10-201ENST00000328834 TSGA10Q9BZW7 698 aa16.35■□□□□ 0.21
CNOT10-201ENST00000328834 COL4A3BPQ9Y5P4 624 aa16.35■□□□□ 0.21
CNOT10-201ENST00000328834 HPDP32754 393 aaPredicted RBP16.34■□□□□ 0.21
CNOT10-201ENST00000328834 SEC24CP53992 1094 aa16.34■□□□□ 0.21
CNOT10-201ENST00000328834 TCP10Q12799 353 aa16.34■□□□□ 0.21
CNOT10-201ENST00000328834 SFMBT2Q5VUG0 894 aa16.34■□□□□ 0.21
CNOT10-201ENST00000328834 CHADLQ6NUI6 762 aa16.34■□□□□ 0.21
CNOT10-201ENST00000328834 SAMD1Q6SPF0 538 aaPredicted RBP16.34■□□□□ 0.21
CNOT10-201ENST00000328834 CNBD1Q8NA66 436 aa16.34■□□□□ 0.21
CNOT10-201ENST00000328834 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.34■□□□□ 0.213e-6■■■■■ 111.8
CNOT10-201ENST00000328834 KDM4FA0A1W2PPD8 638 aa16.34■□□□□ 0.21
CNOT10-201ENST00000328834 ZNF233A6NK53 670 aa16.34■□□□□ 0.21
CNOT10-201ENST00000328834 TMCO5BA8MYB1 307 aa16.34■□□□□ 0.21
CNOT10-201ENST00000328834 RSPH10B2B2RC85 870 aa16.34■□□□□ 0.21
CNOT10-201ENST00000328834 RPS6KA4O75676 772 aa16.34■□□□□ 0.21
CNOT10-201ENST00000328834 KRT18P05783 430 aaKnown RBP16.34■□□□□ 0.21
CNOT10-201ENST00000328834 RSPH10BP0C881 870 aa16.34■□□□□ 0.21
CNOT10-201ENST00000328834 POLD1P28340 1107 aa16.34■□□□□ 0.21
CNOT10-201ENST00000328834 TUBB4BP68371 445 aa16.34■□□□□ 0.21
CNOT10-201ENST00000328834 DCAF17Q5H9S7 520 aaPredicted RBP16.34■□□□□ 0.21
CNOT10-201ENST00000328834 FBXW10Q5XX13 1052 aa16.34■□□□□ 0.21
CNOT10-201ENST00000328834 CCDC70Q6NSX1 233 aa16.34■□□□□ 0.21
CNOT10-201ENST00000328834 FAM196AQ6ZSG2 479 aa16.34■□□□□ 0.21
CNOT10-201ENST00000328834 RUFY1Q96T51 708 aa16.34■□□□□ 0.21
CNOT10-201ENST00000328834 P2RX7Q99572 595 aaKnown RBP16.34■□□□□ 0.21
CNOT10-201ENST00000328834 MTMR4Q9NYA4 1195 aa16.34■□□□□ 0.21
CNOT10-201ENST00000328834 COPB2P35606 906 aa16.33■□□□□ 0.21
CNOT10-201ENST00000328834 PABPC4Q13310 644 aaKnown RBP eCLIP16.33■□□□□ 0.215e-8■■■■■ 36.6
CNOT10-201ENST00000328834 DOK7Q18PE1 504 aa16.33■□□□□ 0.21
CNOT10-201ENST00000328834 PCDHA12Q9UN75 941 aa16.33■□□□□ 0.21
CNOT10-201ENST00000328834 ROBO3Q96MS0 1386 aa16.33■□□□□ 0.2
CNOT10-201ENST00000328834 KCNK3O14649 394 aa16.33■□□□□ 0.2
CNOT10-201ENST00000328834 CLIC2O15247 247 aa16.33■□□□□ 0.2
CNOT10-201ENST00000328834 RAD51CO43502 376 aa16.33■□□□□ 0.2
CNOT10-201ENST00000328834 MED24O75448 989 aa16.33■□□□□ 0.2
CNOT10-201ENST00000328834 NOP2P46087 812 aaKnown RBP16.33■□□□□ 0.2
CNOT10-201ENST00000328834 CORO7P57737 925 aa16.33■□□□□ 0.2
CNOT10-201ENST00000328834 NNTQ13423 1086 aa16.33■□□□□ 0.2
CNOT10-201ENST00000328834 FIGNQ5HY92 759 aa16.33■□□□□ 0.2
CNOT10-201ENST00000328834 TCERG1LQ5VWI1 586 aa16.33■□□□□ 0.2
CNOT10-201ENST00000328834 NAA35Q5VZE5 725 aa16.33■□□□□ 0.2
CNOT10-201ENST00000328834 SCFD1Q8WVM8 642 aa16.33■□□□□ 0.2
CNOT10-201ENST00000328834 KAT2BQ92831 832 aa16.33■□□□□ 0.2
CNOT10-201ENST00000328834 RIOX1Q9H6W3 641 aa16.33■□□□□ 0.2
CNOT10-201ENST00000328834 DAGLAQ9Y4D2 1042 aa16.33■□□□□ 0.2
CNOT10-201ENST00000328834 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.33■□□□□ 0.2
CNOT10-201ENST00000328834 MCM3P25205 808 aa16.32■□□□□ 0.2
CNOT10-201ENST00000328834 HNRNPH3P31942 346 aaKnown RBP16.32■□□□□ 0.2
CNOT10-201ENST00000328834 PPP4CP60510 307 aa16.32■□□□□ 0.2
CNOT10-201ENST00000328834 GSTO1P78417 241 aa16.32■□□□□ 0.2
CNOT10-201ENST00000328834 KLHL30Q0D2K2 578 aa16.32■□□□□ 0.2
CNOT10-201ENST00000328834 USH1GQ495M9 461 aa16.32■□□□□ 0.2
CNOT10-201ENST00000328834 RPGRQ92834 1020 aaKnown RBP16.32■□□□□ 0.2
CNOT10-201ENST00000328834 RPGRIP1Q96KN7 1286 aa16.32■□□□□ 0.2
CNOT10-201ENST00000328834 RNPC3Q96LT9 517 aaKnown RBP16.32■□□□□ 0.2
CNOT10-201ENST00000328834 TSG101Q99816 390 aa16.32■□□□□ 0.2
CNOT10-201ENST00000328834 GPR75-ASB3A0A0A6YYF3 556 aa16.32■□□□□ 0.2
CNOT10-201ENST00000328834 RPS6KA5O75582 802 aa16.32■□□□□ 0.2
CNOT10-201ENST00000328834 TUBBP07437 444 aa16.32■□□□□ 0.2
CNOT10-201ENST00000328834 ADAM9Q13443 819 aa16.32■□□□□ 0.2
CNOT10-201ENST00000328834 HLTFQ14527 1009 aaKnown RBP eCLIP16.32■□□□□ 0.2
CNOT10-201ENST00000328834 ZNF662Q6ZS27 426 aa16.32■□□□□ 0.2
CNOT10-201ENST00000328834 MSL3Q8N5Y2 521 aaKnown RBP16.32■□□□□ 0.2
CNOT10-201ENST00000328834 KCNQ5Q9NR82 932 aa16.32■□□□□ 0.2
CNOT10-201ENST00000328834 GRID2IPA4D2P6 1211 aa16.32■□□□□ 0.2
CNOT10-201ENST00000328834 HSF2BPO75031 334 aa16.32■□□□□ 0.2
CNOT10-201ENST00000328834 PLA2G4BP0C869 781 aa16.32■□□□□ 0.2
CNOT10-201ENST00000328834 TCP1P17987 556 aaKnown RBP16.32■□□□□ 0.2
CNOT10-201ENST00000328834 EPS15P42566 896 aa16.32■□□□□ 0.2
CNOT10-201ENST00000328834 CASP4P49662 377 aa16.32■□□□□ 0.2
CNOT10-201ENST00000328834 FXR2P51116 673 aaKnown RBP eCLIP16.32■□□□□ 0.21e-6■■■■□ 24.7
CNOT10-201ENST00000328834 PTK2Q05397 1052 aa16.32■□□□□ 0.2
CNOT10-201ENST00000328834 NFIAQ12857 509 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms