RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 MUC3AQ02505 3323 aa14.25□□□□□ -0.13
TPM3-204ENST00000323144 TCF20Q9UGU0 1960 aaKnown RBP14.24□□□□□ -0.13
TPM3-204ENST00000323144 FIBPO43427 364 aa14.24□□□□□ -0.13
TPM3-204ENST00000323144 CTSHP09668 335 aa14.24□□□□□ -0.13
TPM3-204ENST00000323144 SMIM10L2AP0DMW4 78 aa14.24□□□□□ -0.13
TPM3-204ENST00000323144 SMIM10L2BP0DMW5 78 aa14.24□□□□□ -0.13
TPM3-204ENST00000323144 ICAM3P32942 547 aa14.24□□□□□ -0.13
TPM3-204ENST00000323144 KIF5BP33176 963 aa14.24□□□□□ -0.13
TPM3-204ENST00000323144 KCNJ6P48051 423 aa14.24□□□□□ -0.13
TPM3-204ENST00000323144 TRAF1Q13077 416 aa14.24□□□□□ -0.13
TPM3-204ENST00000323144 GNPTABQ3T906 1256 aa14.24□□□□□ -0.13
TPM3-204ENST00000323144 TJAP1Q5JTD0 557 aa14.24□□□□□ -0.13
TPM3-204ENST00000323144 KCNV1Q6PIU1 500 aa14.24□□□□□ -0.13
TPM3-204ENST00000323144 CYFIP1Q7L576 1253 aa14.24□□□□□ -0.13
TPM3-204ENST00000323144 SERINC5Q86VE9 423 aa14.24□□□□□ -0.13
TPM3-204ENST00000323144 SMARCC2Q8TAQ2 1214 aa14.24□□□□□ -0.13
TPM3-204ENST00000323144 TMEM87BQ96K49 555 aa14.24□□□□□ -0.13
TPM3-204ENST00000323144 GPR20Q99678 358 aa14.24□□□□□ -0.13
TPM3-204ENST00000323144 OSBPL7Q9BZF2 842 aa14.24□□□□□ -0.13
TPM3-204ENST00000323144 MLXIPQ9HAP2 919 aa14.24□□□□□ -0.13
TPM3-204ENST00000323144 PRRC2BQ5JSZ5 2229 aaKnown RBP14.23□□□□□ -0.13
TPM3-204ENST00000323144 PIK3CDO00329 1044 aa14.23□□□□□ -0.13
TPM3-204ENST00000323144 NOP56O00567 594 aaKnown RBP14.23□□□□□ -0.13
TPM3-204ENST00000323144 BMP2KLQ5H9B9 411 aa14.23□□□□□ -0.13
TPM3-204ENST00000323144 PCNX4Q63HM2 1172 aa14.23□□□□□ -0.13
TPM3-204ENST00000323144 METTL7BQ6UX53 244 aa14.23□□□□□ -0.13
TPM3-204ENST00000323144 CCDC82Q8N4S0 544 aa14.23□□□□□ -0.13
TPM3-204ENST00000323144 GDPD5Q8WTR4 605 aa14.23□□□□□ -0.13
TPM3-204ENST00000323144 ARNTL2Q8WYA1 636 aa14.23□□□□□ -0.13
TPM3-204ENST00000323144 PKD2L1Q9P0L9 805 aa14.23□□□□□ -0.13
TPM3-204ENST00000323144 KAT6AQ92794 2004 aa14.23□□□□□ -0.13
TPM3-204ENST00000323144 WDR81Q562E7 1941 aa14.22□□□□□ -0.13
TPM3-204ENST00000323144 C17orf102A2RUQ5 167 aa14.22□□□□□ -0.13
TPM3-204ENST00000323144 SPATA31C2B4DYI2 1134 aa14.22□□□□□ -0.13
TPM3-204ENST00000323144 H3BRB1 525 aa14.22□□□□□ -0.13
TPM3-204ENST00000323144 TREHO43280 583 aa14.22□□□□□ -0.13
TPM3-204ENST00000323144 TLL1O43897 1013 aa14.22□□□□□ -0.13
TPM3-204ENST00000323144 PPFIA4O75335 1185 aa14.22□□□□□ -0.13
TPM3-204ENST00000323144 TGFB3P10600 412 aa14.22□□□□□ -0.13
TPM3-204ENST00000323144 THPOP40225 353 aa14.22□□□□□ -0.13
TPM3-204ENST00000323144 LIFRP42702 1097 aa14.22□□□□□ -0.13
TPM3-204ENST00000323144 MKRN4PQ13434 485 aaPredicted RBP14.22□□□□□ -0.13
TPM3-204ENST00000323144 ADCK5Q3MIX3 580 aa14.22□□□□□ -0.13
TPM3-204ENST00000323144 UTP14CQ5TAP6 766 aaKnown RBP14.22□□□□□ -0.13
TPM3-204ENST00000323144 WWC2Q6AWC2 1192 aa14.22□□□□□ -0.13
TPM3-204ENST00000323144 TYW1BQ6NUM6 668 aa14.22□□□□□ -0.13
TPM3-204ENST00000323144 FAM117BQ6P1L5 589 aa14.22□□□□□ -0.13
TPM3-204ENST00000323144 APOA5Q6Q788 366 aa14.22□□□□□ -0.13
TPM3-204ENST00000323144 HEATR3Q7Z4Q2 680 aa14.22□□□□□ -0.13
TPM3-204ENST00000323144 CUL5Q93034 780 aa14.22□□□□□ -0.13
TPM3-204ENST00000323144 PGBD1Q96JS3 809 aa14.22□□□□□ -0.13
TPM3-204ENST00000323144 MTA3Q9BTC8 594 aa14.22□□□□□ -0.13
TPM3-204ENST00000323144 TUT1Q9H6E5 874 aaKnown RBP14.22□□□□□ -0.13
TPM3-204ENST00000323144 STAM2O75886 525 aa14.21□□□□□ -0.13
TPM3-204ENST00000323144 KCNA2P16389 499 aa14.21□□□□□ -0.13
TPM3-204ENST00000323144 TFF2Q03403 129 aa14.21□□□□□ -0.13
TPM3-204ENST00000323144 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.21□□□□□ -0.134e-6■□□□□ 9.7
TPM3-204ENST00000323144 CENPQQ7L2Z9 268 aaPredicted RBP14.21□□□□□ -0.13
TPM3-204ENST00000323144 SGMS1Q86VZ5 419 aa14.21□□□□□ -0.13
TPM3-204ENST00000323144 RASEFQ8IZ41 740 aa14.21□□□□□ -0.13
TPM3-204ENST00000323144 PHOSPHO2Q8TCD6 241 aa14.21□□□□□ -0.13
TPM3-204ENST00000323144 LMBR1Q8WVP7 490 aa14.21□□□□□ -0.13
TPM3-204ENST00000323144 ATP6V0A1Q93050 837 aa14.21□□□□□ -0.13
TPM3-204ENST00000323144 LZTS2Q9BRK4 669 aa14.21□□□□□ -0.13
TPM3-204ENST00000323144 MTUS1Q9ULD2 1270 aa14.21□□□□□ -0.13
TPM3-204ENST00000323144 SLC12A7Q9Y666 1083 aa14.21□□□□□ -0.13
TPM3-204ENST00000323144 MTCH2Q9Y6C9 303 aa14.21□□□□□ -0.13
TPM3-204ENST00000323144 TTC28Q96AY4 2481 aa14.21□□□□□ -0.13
TPM3-204ENST00000323144 LPXNO60711 386 aa14.2□□□□□ -0.14
TPM3-204ENST00000323144 ATP9AO75110 1047 aa14.2□□□□□ -0.14
TPM3-204ENST00000323144 LGR5O75473 907 aa14.2□□□□□ -0.14
TPM3-204ENST00000323144 CALM1P0DP23 149 aa14.2□□□□□ -0.14
TPM3-204ENST00000323144 CALM2P0DP24 149 aa14.2□□□□□ -0.14
TPM3-204ENST00000323144 CALM3P0DP25 149 aa14.2□□□□□ -0.14
TPM3-204ENST00000323144 ITGB5P18084 799 aa14.2□□□□□ -0.14
TPM3-204ENST00000323144 GNAQP50148 359 aa14.2□□□□□ -0.14
TPM3-204ENST00000323144 GRB10Q13322 594 aa14.2□□□□□ -0.14
TPM3-204ENST00000323144 NEDD9Q14511 834 aa14.2□□□□□ -0.14
TPM3-204ENST00000323144 SETD4Q9NVD3 440 aa14.2□□□□□ -0.14
TPM3-204ENST00000323144 BRPF3Q9ULD4 1205 aa14.2□□□□□ -0.14
TPM3-204ENST00000323144 CDC45O75419 566 aa14.19□□□□□ -0.14
TPM3-204ENST00000323144 GJB5O95377 273 aa14.19□□□□□ -0.14
TPM3-204ENST00000323144 CPA1P15085 419 aa14.19□□□□□ -0.14
TPM3-204ENST00000323144 MARK3P27448 753 aa14.19□□□□□ -0.14
TPM3-204ENST00000323144 SMARCA1P28370 1054 aa14.19□□□□□ -0.14
TPM3-204ENST00000323144 TCF7P36402 384 aaPredicted RBP14.19□□□□□ -0.14
TPM3-204ENST00000323144 ARHGAP4P98171 946 aa14.19□□□□□ -0.14
TPM3-204ENST00000323144 FUT2Q10981 343 aa14.19□□□□□ -0.14
TPM3-204ENST00000323144 RUFY4Q6ZNE9 571 aa14.19□□□□□ -0.14
TPM3-204ENST00000323144 DBF4BQ8NFT6 615 aa14.19□□□□□ -0.14
TPM3-204ENST00000323144 ADAMTS19Q8TE59 1207 aa14.19□□□□□ -0.14
TPM3-204ENST00000323144 NECAB3Q96P71 396 aaPredicted RBP14.19□□□□□ -0.14
TPM3-204ENST00000323144 ASB2Q96Q27 587 aa14.19□□□□□ -0.14
TPM3-204ENST00000323144 RNPEPQ9H4A4 650 aa14.19□□□□□ -0.14
TPM3-204ENST00000323144 PSTPIP2Q9H939 334 aa14.19□□□□□ -0.14
TPM3-204ENST00000323144 ZNF215Q9UL58 517 aaPredicted RBP14.19□□□□□ -0.14
TPM3-204ENST00000323144 EMSYQ7Z589 1322 aa14.18□□□□□ -0.14
TPM3-204ENST00000323144 ABHD14A-ACY1A0A1B0GW23 586 aa14.18□□□□□ -0.14
TPM3-204ENST00000323144 LINC01553A4QN01 128 aa14.18□□□□□ -0.14
TPM3-204ENST00000323144 GOLGA8AA7E2F4 631 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms