RNA–Protein interactions for RNA: ENST00000321110.1

RTL3-201, Transcript of retrotransposon Gag like 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RTL3, Length 2,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3-201ENST00000321110 PRDM1O75626 825 aa8.71□□□□□ -1.02
RTL3-201ENST00000321110 KIF5BP33176 963 aa8.71□□□□□ -1.02
RTL3-201ENST00000321110 EHHADHQ08426 723 aa8.71□□□□□ -1.02
RTL3-201ENST00000321110 MEI1Q5TIA1 1274 aa8.71□□□□□ -1.02
RTL3-201ENST00000321110 CACNA2D4Q7Z3S7 1137 aa8.71□□□□□ -1.02
RTL3-201ENST00000321110 ZSCAN29Q8IWY8 852 aaPredicted RBP8.71□□□□□ -1.02
RTL3-201ENST00000321110 RNF10Q8N5U6 811 aaKnown RBP8.71□□□□□ -1.02
RTL3-201ENST00000321110 ATL2Q8NHH9 583 aa8.71□□□□□ -1.02
RTL3-201ENST00000321110 FAM81AQ8TBF8 368 aa8.71□□□□□ -1.02
RTL3-201ENST00000321110 KLHL29Q96CT2 875 aa8.71□□□□□ -1.02
RTL3-201ENST00000321110 RBM41Q96IZ5 413 aaKnown RBP8.71□□□□□ -1.02
RTL3-201ENST00000321110 NOC4LQ9BVI4 516 aaKnown RBP8.71□□□□□ -1.02
RTL3-201ENST00000321110 ARHGEF3Q9NR81 526 aa8.71□□□□□ -1.02
RTL3-201ENST00000321110 PCMTD2Q9NV79 361 aa8.71□□□□□ -1.02
RTL3-201ENST00000321110 CHCHD3Q9NX63 227 aaKnown RBP8.71□□□□□ -1.02
RTL3-201ENST00000321110 PHRF1Q9P1Y6 1649 aaKnown RBP8.71□□□□□ -1.02
RTL3-201ENST00000321110 TMEM94Q12767 1356 aa8.71□□□□□ -1.02
RTL3-201ENST00000321110 PSMA7O14818 248 aa8.7□□□□□ -1.02
RTL3-201ENST00000321110 KLRC4O43908 158 aa8.7□□□□□ -1.02
RTL3-201ENST00000321110 PDHA1P08559 390 aa8.7□□□□□ -1.02
RTL3-201ENST00000321110 GNAZP19086 355 aa8.7□□□□□ -1.02
RTL3-201ENST00000321110 MTIF2P46199 727 aaKnown RBP8.7□□□□□ -1.02
RTL3-201ENST00000321110 MTMR3Q13615 1198 aa8.7□□□□□ -1.02
RTL3-201ENST00000321110 PLS1Q14651 629 aa8.7□□□□□ -1.02
RTL3-201ENST00000321110 SEPT2Q15019 361 aa8.7□□□□□ -1.02
RTL3-201ENST00000321110 TTC38Q5R3I4 469 aa8.7□□□□□ -1.02
RTL3-201ENST00000321110 PBKQ96KB5 322 aa8.7□□□□□ -1.02
RTL3-201ENST00000321110 SELENOSQ9BQE4 189 aa8.7□□□□□ -1.02
RTL3-201ENST00000321110 MOV10L1Q9BXT6 1211 aaKnown RBP8.7□□□□□ -1.02
RTL3-201ENST00000321110 PNMA3Q9UL41 463 aa8.7□□□□□ -1.02
RTL3-201ENST00000321110 SIK3Q9Y2K2 1263 aa8.7□□□□□ -1.02
RTL3-201ENST00000321110 LRRC42Q9Y546 428 aa8.7□□□□□ -1.02
RTL3-201ENST00000321110 CD2APQ9Y5K6 639 aa8.7□□□□□ -1.02
RTL3-201ENST00000321110 SPATA31A3Q5VYP0 1347 aa8.7□□□□□ -1.02
RTL3-201ENST00000321110 DAPK3O43293 454 aa8.7□□□□□ -1.02
RTL3-201ENST00000321110 PPFIA2O75334 1257 aa8.7□□□□□ -1.02
RTL3-201ENST00000321110 CNGA1P29973 690 aa8.7□□□□□ -1.02
RTL3-201ENST00000321110 ALDH3A1P30838 453 aa8.7□□□□□ -1.02
RTL3-201ENST00000321110 KRT2P35908 639 aa8.7□□□□□ -1.02
RTL3-201ENST00000321110 MMP13P45452 471 aa8.7□□□□□ -1.02
RTL3-201ENST00000321110 COPS2P61201 443 aa8.7□□□□□ -1.02
RTL3-201ENST00000321110 DHX9Q08211 1270 aaKnown RBP8.7□□□□□ -1.02
RTL3-201ENST00000321110 BNIP1Q12981 228 aa8.7□□□□□ -1.02
RTL3-201ENST00000321110 MTA1Q13330 715 aa8.7□□□□□ -1.02
RTL3-201ENST00000321110 C1orf141Q5JVX7 400 aa8.7□□□□□ -1.02
RTL3-201ENST00000321110 RNF220Q5VTB9 566 aa8.7□□□□□ -1.02
RTL3-201ENST00000321110 RRAGAQ7L523 313 aa8.7□□□□□ -1.02
RTL3-201ENST00000321110 STAG2Q8N3U4 1231 aa8.7□□□□□ -1.02
RTL3-201ENST00000321110 PRMT1Q99873 361 aaKnown RBP8.7□□□□□ -1.02
RTL3-201ENST00000321110 PHF20Q9BVI0 1012 aa8.7□□□□□ -1.02
RTL3-201ENST00000321110 PHF8Q9UPP1 1060 aa8.7□□□□□ -1.02
RTL3-201ENST00000321110 SNX3O60493 162 aa8.69□□□□□ -1.02
RTL3-201ENST00000321110 BMP15O95972 392 aa8.69□□□□□ -1.02
RTL3-201ENST00000321110 OAS1P00973 400 aaKnown RBP8.69□□□□□ -1.02
RTL3-201ENST00000321110 VIMP08670 466 aaKnown RBP8.69□□□□□ -1.02
RTL3-201ENST00000321110 KLRC1P26715 233 aa8.69□□□□□ -1.02
RTL3-201ENST00000321110 ZNF131P52739 623 aa8.69□□□□□ -1.02
RTL3-201ENST00000321110 MRPS35P82673 323 aaKnown RBP8.69□□□□□ -1.02
RTL3-201ENST00000321110 PKN1Q16512 942 aa8.69□□□□□ -1.02
RTL3-201ENST00000321110 SGSM1Q2NKQ1 1148 aa8.69□□□□□ -1.02
RTL3-201ENST00000321110 NAALADL2Q58DX5 795 aa8.69□□□□□ -1.02
RTL3-201ENST00000321110 HHATQ5VTY9 493 aa8.69□□□□□ -1.02
RTL3-201ENST00000321110 HGSNATQ68CP4 663 aa8.69□□□□□ -1.02
RTL3-201ENST00000321110 ANKRD40Q6AI12 368 aa8.69□□□□□ -1.02
RTL3-201ENST00000321110 ASRGL1Q7L266 308 aa8.69□□□□□ -1.02
RTL3-201ENST00000321110 NCAPG2Q86XI2 1143 aa8.69□□□□□ -1.02
RTL3-201ENST00000321110 GIMAP8Q8ND71 665 aaPredicted RBP8.69□□□□□ -1.02
RTL3-201ENST00000321110 SCFD2Q8WU76 684 aa8.69□□□□□ -1.02
RTL3-201ENST00000321110 BAP1Q92560 729 aa8.69□□□□□ -1.02
RTL3-201ENST00000321110 TNFRSF25Q93038 417 aa8.69□□□□□ -1.02
RTL3-201ENST00000321110 RPS6KC1Q96S38 1066 aa8.69□□□□□ -1.02
RTL3-201ENST00000321110 RAB17Q9H0T7 212 aa8.69□□□□□ -1.02
RTL3-201ENST00000321110 LRP6O75581 1613 aa8.69□□□□□ -1.02
RTL3-201ENST00000321110 SIPA1L3O60292 1781 aaPredicted RBP8.69□□□□□ -1.02
RTL3-201ENST00000321110 ABLIM1O14639 778 aa8.69□□□□□ -1.02
RTL3-201ENST00000321110 ADD2P35612 726 aa8.69□□□□□ -1.02
RTL3-201ENST00000321110 IFNAR2P48551 515 aa8.69□□□□□ -1.02
RTL3-201ENST00000321110 CUL3Q13618 768 aa8.69□□□□□ -1.02
RTL3-201ENST00000321110 LBRQ14739 615 aaKnown RBP8.69□□□□□ -1.02
RTL3-201ENST00000321110 NPY5RQ15761 445 aa8.69□□□□□ -1.02
RTL3-201ENST00000321110 C1QTNF12Q5T7M4 302 aa8.69□□□□□ -1.02
RTL3-201ENST00000321110 FANCBQ8NB91 859 aa8.69□□□□□ -1.02
RTL3-201ENST00000321110 SLC17A8Q8NDX2 589 aa8.69□□□□□ -1.02
RTL3-201ENST00000321110 PHC3Q8NDX5 983 aa8.69□□□□□ -1.02
RTL3-201ENST00000321110 ANKRD27Q96NW4 1050 aa8.69□□□□□ -1.02
RTL3-201ENST00000321110 AP1M1Q9BXS5 423 aa8.69□□□□□ -1.02
RTL3-201ENST00000321110 TRIM4Q9C037 500 aa8.69□□□□□ -1.02
RTL3-201ENST00000321110 UBE2OQ9C0C9 1292 aaKnown RBP8.69□□□□□ -1.02
RTL3-201ENST00000321110 DDX47Q9H0S4 455 aaKnown RBP8.69□□□□□ -1.02
RTL3-201ENST00000321110 LGR5O75473 907 aa8.68□□□□□ -1.02
RTL3-201ENST00000321110 RHOBTB3O94955 611 aa8.68□□□□□ -1.02
RTL3-201ENST00000321110 SP100P23497 879 aaPredicted RBP8.68□□□□□ -1.02
RTL3-201ENST00000321110 PCK1P35558 622 aa8.68□□□□□ -1.02
RTL3-201ENST00000321110 STAT6P42226 847 aa8.68□□□□□ -1.02
RTL3-201ENST00000321110 LACTBP83111 547 aaPredicted RBP8.68□□□□□ -1.02
RTL3-201ENST00000321110 ATP11AP98196 1134 aa8.68□□□□□ -1.02
RTL3-201ENST00000321110 NAB2Q15742 525 aa8.68□□□□□ -1.02
RTL3-201ENST00000321110 FOXB2Q5VYV0 432 aa8.68□□□□□ -1.02
RTL3-201ENST00000321110 TMEM154Q6P9G4 183 aa8.68□□□□□ -1.02
RTL3-201ENST00000321110 ANKRD23Q86SG2 305 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms