RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.47■□□□□ 0.23
RPP40-201ENST00000319533 HOMER1Q86YM7 354 aa16.47■□□□□ 0.23
RPP40-201ENST00000319533 DBF4BQ8NFT6 615 aa16.47■□□□□ 0.23
RPP40-201ENST00000319533 INPP4AQ96PE3 977 aaPredicted RBP16.47■□□□□ 0.23
RPP40-201ENST00000319533 TUT1Q9H6E5 874 aaKnown RBP16.47■□□□□ 0.23
RPP40-201ENST00000319533 MLXIPQ9HAP2 919 aa16.47■□□□□ 0.23
RPP40-201ENST00000319533 SENP2Q9HC62 589 aa16.47■□□□□ 0.23
RPP40-201ENST00000319533 INSL6Q9Y581 213 aa16.47■□□□□ 0.23
RPP40-201ENST00000319533 SIP14410 1827 aa16.47■□□□□ 0.23
RPP40-201ENST00000319533 BAZ2BQ9UIF8 2168 aaKnown RBP16.46■□□□□ 0.23
RPP40-201ENST00000319533 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.46■□□□□ 0.23
RPP40-201ENST00000319533 C17orf102A2RUQ5 167 aa16.46■□□□□ 0.23
RPP40-201ENST00000319533 SPATA31C2B4DYI2 1134 aa16.46■□□□□ 0.23
RPP40-201ENST00000319533 IFIT3O14879 490 aaKnown RBP16.46■□□□□ 0.23
RPP40-201ENST00000319533 CAND2O75155 1236 aa16.46■□□□□ 0.23
RPP40-201ENST00000319533 LGALS2P05162 132 aa16.46■□□□□ 0.23
RPP40-201ENST00000319533 GNPTABQ3T906 1256 aa16.46■□□□□ 0.23
RPP40-201ENST00000319533 FCHSD1Q86WN1 690 aa16.46■□□□□ 0.23
RPP40-201ENST00000319533 BCAS3Q9H6U6 928 aa16.46■□□□□ 0.23
RPP40-201ENST00000319533 RAPGEFL1Q9UHV5 662 aa16.46■□□□□ 0.23
RPP40-201ENST00000319533 MICAL3Q7RTP6 2002 aa16.45■□□□□ 0.22
RPP40-201ENST00000319533 SORBS3O60504 671 aa16.45■□□□□ 0.22
RPP40-201ENST00000319533 AMHP03971 560 aa16.45■□□□□ 0.22
RPP40-201ENST00000319533 SMIM10L2AP0DMW4 78 aa16.45■□□□□ 0.22
RPP40-201ENST00000319533 SMIM10L2BP0DMW5 78 aa16.45■□□□□ 0.22
RPP40-201ENST00000319533 THPOP40225 353 aa16.45■□□□□ 0.22
RPP40-201ENST00000319533 PTH1RQ03431 593 aa16.45■□□□□ 0.22
RPP40-201ENST00000319533 SEMA3FQ13275 785 aa16.45■□□□□ 0.22
RPP40-201ENST00000319533 NEDD9Q14511 834 aa16.45■□□□□ 0.22
RPP40-201ENST00000319533 WTAPQ15007 396 aa16.45■□□□□ 0.22
RPP40-201ENST00000319533 METTL7BQ6UX53 244 aa16.45■□□□□ 0.22
RPP40-201ENST00000319533 RUFY2Q8WXA3 655 aa16.45■□□□□ 0.22
RPP40-201ENST00000319533 ATP6V0A1Q93050 837 aa16.45■□□□□ 0.22
RPP40-201ENST00000319533 ZFP91Q96JP5 570 aaPredicted RBP16.45■□□□□ 0.22
RPP40-201ENST00000319533 MAP3K14Q99558 947 aa16.45■□□□□ 0.22
RPP40-201ENST00000319533 USP26Q9BXU7 913 aa16.45■□□□□ 0.22
RPP40-201ENST00000319533 RNPEPQ9H4A4 650 aa16.45■□□□□ 0.22
RPP40-201ENST00000319533 COL4A6Q14031 1691 aa16.44■□□□□ 0.22
RPP40-201ENST00000319533 ERICH2A1L162 156 aa16.44■□□□□ 0.22
RPP40-201ENST00000319533 E7EWF7 191 aa16.44■□□□□ 0.22
RPP40-201ENST00000319533 TREHO43280 583 aa16.44■□□□□ 0.22
RPP40-201ENST00000319533 CHMLP26374 656 aa16.44■□□□□ 0.22
RPP40-201ENST00000319533 ADAM17P78536 824 aa16.44■□□□□ 0.22
RPP40-201ENST00000319533 NCOA7Q8NI08 942 aa16.44■□□□□ 0.22
RPP40-201ENST00000319533 IGDCC4Q8TDY8 1250 aa16.44■□□□□ 0.22
RPP40-201ENST00000319533 GPR20Q99678 358 aa16.44■□□□□ 0.22
RPP40-201ENST00000319533 SENP7Q9BQF6 1050 aa16.44■□□□□ 0.22
RPP40-201ENST00000319533 MTUS1Q9ULD2 1270 aa16.44■□□□□ 0.22
RPP40-201ENST00000319533 TAF6LQ9Y6J9 622 aa16.44■□□□□ 0.22
RPP40-201ENST00000319533 RBAK-RBAKDNI3L0D1 243 aa16.43■□□□□ 0.22
RPP40-201ENST00000319533 FIBPO43427 364 aa16.43■□□□□ 0.22
RPP40-201ENST00000319533 SMARCA1P28370 1054 aa16.43■□□□□ 0.22
RPP40-201ENST00000319533 ANTXR2P58335 489 aa16.43■□□□□ 0.22
RPP40-201ENST00000319533 SART3Q15020 963 aaKnown RBP16.43■□□□□ 0.22
RPP40-201ENST00000319533 FAM26DQ5JW98 314 aa16.43■□□□□ 0.22
RPP40-201ENST00000319533 FAM117BQ6P1L5 589 aa16.43■□□□□ 0.22
RPP40-201ENST00000319533 XRRA1Q6P2D8 792 aa16.43■□□□□ 0.22
RPP40-201ENST00000319533 RALYLQ86SE5 291 aaKnown RBP16.43■□□□□ 0.22
RPP40-201ENST00000319533 TOP1MTQ969P6 601 aa16.43■□□□□ 0.22
RPP40-201ENST00000319533 SAMD11Q96NU1 681 aa16.43■□□□□ 0.22
RPP40-201ENST00000319533 C17orf80Q9BSJ5 609 aa16.43■□□□□ 0.22
RPP40-201ENST00000319533 OSBPL7Q9BZF2 842 aa16.43■□□□□ 0.22
RPP40-201ENST00000319533 EPHX3Q9H6B9 360 aa16.43■□□□□ 0.22
RPP40-201ENST00000319533 UBE2ZQ9H832 354 aaPredicted RBP16.43■□□□□ 0.22
RPP40-201ENST00000319533 PIK3CDO00329 1044 aa16.42■□□□□ 0.22
RPP40-201ENST00000319533 NOP56O00567 594 aaKnown RBP16.42■□□□□ 0.22
RPP40-201ENST00000319533 SGSM2O43147 1006 aa16.42■□□□□ 0.22
RPP40-201ENST00000319533 GNAT1P11488 350 aa16.42■□□□□ 0.22
RPP40-201ENST00000319533 PLA2G5P39877 138 aa16.42■□□□□ 0.22
RPP40-201ENST00000319533 LEXMQ3ZCV2 418 aa16.42■□□□□ 0.22
RPP40-201ENST00000319533 PCNX4Q63HM2 1172 aa16.42■□□□□ 0.22
RPP40-201ENST00000319533 CYFIP1Q7L576 1253 aa16.42■□□□□ 0.22
RPP40-201ENST00000319533 CATIPQ7Z7H3 387 aa16.42■□□□□ 0.22
RPP40-201ENST00000319533 MB21D2Q8IYB1 491 aaPredicted RBP16.42■□□□□ 0.22
RPP40-201ENST00000319533 MYOCDQ8IZQ8 938 aa16.42■□□□□ 0.22
RPP40-201ENST00000319533 FBXO22Q8NEZ5 403 aa16.42■□□□□ 0.22
RPP40-201ENST00000319533 SEPT8Q92599 483 aa16.42■□□□□ 0.22
RPP40-201ENST00000319533 SPZ1Q9BXG8 430 aa16.42■□□□□ 0.22
RPP40-201ENST00000319533 ARIH1Q9Y4X5 557 aaPredicted RBP16.42■□□□□ 0.22
RPP40-201ENST00000319533 MEIS2O14770 477 aa16.41■□□□□ 0.22
RPP40-201ENST00000319533 RPAINQ86UA6 219 aa16.41■□□□□ 0.22
RPP40-201ENST00000319533 MAP4K1Q92918 833 aa16.41■□□□□ 0.22
RPP40-201ENST00000319533 MRPL38Q96DV4 380 aaKnown RBP16.41■□□□□ 0.22
RPP40-201ENST00000319533 MTA3Q9BTC8 594 aa16.41■□□□□ 0.22
RPP40-201ENST00000319533 LRFN3Q9BTN0 628 aa16.41■□□□□ 0.22
RPP40-201ENST00000319533 SETD4Q9NVD3 440 aa16.41■□□□□ 0.22
RPP40-201ENST00000319533 GTF3C3Q9Y5Q9 886 aa16.41■□□□□ 0.22
RPP40-201ENST00000319533 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.4■□□□□ 0.22
RPP40-201ENST00000319533 DDAH1O94760 285 aa16.4■□□□□ 0.22
RPP40-201ENST00000319533 EPC2Q52LR7 807 aa16.4■□□□□ 0.22
RPP40-201ENST00000319533 APBB2Q92870 758 aa16.4■□□□□ 0.22
RPP40-201ENST00000319533 KHSRPQ92945 711 aaKnown RBP eCLIP16.4■□□□□ 0.22
RPP40-201ENST00000319533 LY9Q9HBG7 655 aa16.4■□□□□ 0.22
RPP40-201ENST00000319533 CD320Q9NPF0 282 aa16.4■□□□□ 0.22
RPP40-201ENST00000319533 RTEL1Q9NZ71 1219 aa16.4■□□□□ 0.22
RPP40-201ENST00000319533 ZNF215Q9UL58 517 aaPredicted RBP16.4■□□□□ 0.22
RPP40-201ENST00000319533 TELO2Q9Y4R8 837 aa16.4■□□□□ 0.22
RPP40-201ENST00000319533 H3BNC9 293 aa16.39■□□□□ 0.21
RPP40-201ENST00000319533 GPR37L1O60883 481 aa16.39■□□□□ 0.21
RPP40-201ENST00000319533 COL19A1Q14993 1142 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms