RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 PHLDB2Q86SQ0 1253 aa8.23□□□□□ -1.09
CDHR3-201ENST00000317716 MYCBPAPQ8TBZ2 947 aa8.23□□□□□ -1.09
CDHR3-201ENST00000317716 C6orf50Q9HD87 102 aa8.23□□□□□ -1.09
CDHR3-201ENST00000317716 RAB21Q9UL25 225 aa8.23□□□□□ -1.09
CDHR3-201ENST00000317716 G3BP2Q9UN86 482 aaKnown RBP8.23□□□□□ -1.09
CDHR3-201ENST00000317716 COL14A1Q05707 1796 aaKnown RBP8.23□□□□□ -1.09
CDHR3-201ENST00000317716 ANKRD26Q9UPS8 1709 aa8.23□□□□□ -1.09
CDHR3-201ENST00000317716 CHMP2AO43633 222 aa8.23□□□□□ -1.09
CDHR3-201ENST00000317716 CAPRIN2Q6IMN6 1127 aaKnown RBP8.23□□□□□ -1.09
CDHR3-201ENST00000317716 CYB5D1Q6P9G0 228 aa8.23□□□□□ -1.09
CDHR3-201ENST00000317716 RFX8Q6ZV50 586 aa8.23□□□□□ -1.09
CDHR3-201ENST00000317716 TRAPPC11Q7Z392 1133 aa8.23□□□□□ -1.09
CDHR3-201ENST00000317716 ATG9AQ7Z3C6 839 aa8.23□□□□□ -1.09
CDHR3-201ENST00000317716 TMEM139Q8IV31 216 aa8.23□□□□□ -1.09
CDHR3-201ENST00000317716 RNF10Q8N5U6 811 aaKnown RBP8.23□□□□□ -1.09
CDHR3-201ENST00000317716 NSMCE1Q8WV22 266 aa8.23□□□□□ -1.09
CDHR3-201ENST00000317716 LMBR1Q8WVP7 490 aa8.23□□□□□ -1.09
CDHR3-201ENST00000317716 SAAL1Q96ER3 474 aa8.23□□□□□ -1.09
CDHR3-201ENST00000317716 DDX23Q9BUQ8 820 aaKnown RBP8.23□□□□□ -1.09
CDHR3-201ENST00000317716 TRIM7Q9C029 511 aa8.23□□□□□ -1.09
CDHR3-201ENST00000317716 PKD2L1Q9P0L9 805 aa8.23□□□□□ -1.09
CDHR3-201ENST00000317716 PNMA2Q9UL42 364 aa8.23□□□□□ -1.09
CDHR3-201ENST00000317716 HPSEQ9Y251 543 aa8.23□□□□□ -1.09
CDHR3-201ENST00000317716 CTNNA2P26232 953 aa8.22□□□□□ -1.09
CDHR3-201ENST00000317716 HERVK_113P62684 666 aa8.22□□□□□ -1.09
CDHR3-201ENST00000317716 GPR162Q16538 588 aa8.22□□□□□ -1.09
CDHR3-201ENST00000317716 UPF1Q92900 1129 aaKnown RBP eCLIP8.22□□□□□ -1.09
CDHR3-201ENST00000317716 STRBPQ96SI9 672 aaKnown RBP8.22□□□□□ -1.09
CDHR3-201ENST00000317716 VIPAS39Q9H9C1 493 aa8.22□□□□□ -1.09
CDHR3-201ENST00000317716 A0A087X0B3 334 aa8.22□□□□□ -1.09
CDHR3-201ENST00000317716 WDR91A4D1P6 747 aa8.22□□□□□ -1.09
CDHR3-201ENST00000317716 HMGB1P1B2RPK0 211 aaPredicted RBP8.22□□□□□ -1.09
CDHR3-201ENST00000317716 PPP1R3GB7ZBB8 358 aa8.22□□□□□ -1.09
CDHR3-201ENST00000317716 CETN3O15182 167 aa8.22□□□□□ -1.09
CDHR3-201ENST00000317716 PDE8AO60658 829 aa8.22□□□□□ -1.09
CDHR3-201ENST00000317716 GNAT2P19087 354 aa8.22□□□□□ -1.09
CDHR3-201ENST00000317716 MTMR3Q13615 1198 aa8.22□□□□□ -1.09
CDHR3-201ENST00000317716 PTGISQ16647 500 aa8.22□□□□□ -1.09
CDHR3-201ENST00000317716 SLC51AQ86UW1 340 aa8.22□□□□□ -1.09
CDHR3-201ENST00000317716 CELF4Q9BZC1 486 aaKnown RBP8.22□□□□□ -1.09
CDHR3-201ENST00000317716 ACTR5Q9H9F9 607 aaPredicted RBP8.22□□□□□ -1.09
CDHR3-201ENST00000317716 RBM28Q9NW13 759 aaKnown RBP8.22□□□□□ -1.09
CDHR3-201ENST00000317716 LRRN2O75325 713 aa8.22□□□□□ -1.09
CDHR3-201ENST00000317716 LGR5O75473 907 aa8.22□□□□□ -1.09
CDHR3-201ENST00000317716 ATRNO75882 1429 aa8.22□□□□□ -1.09
CDHR3-201ENST00000317716 BAG2O95816 211 aa8.22□□□□□ -1.09
CDHR3-201ENST00000317716 ZNF18P17022 549 aa8.22□□□□□ -1.09
CDHR3-201ENST00000317716 KRT15P19012 456 aa8.22□□□□□ -1.09
CDHR3-201ENST00000317716 TNFAIP3P21580 790 aa8.22□□□□□ -1.09
CDHR3-201ENST00000317716 DPYDQ12882 1025 aa8.22□□□□□ -1.09
CDHR3-201ENST00000317716 RBM26Q5T8P6 1007 aaKnown RBP8.22□□□□□ -1.09
CDHR3-201ENST00000317716 RASIP1Q5U651 963 aa8.22□□□□□ -1.09
CDHR3-201ENST00000317716 ANKRD40Q6AI12 368 aa8.22□□□□□ -1.09
CDHR3-201ENST00000317716 CYP4F22Q6NT55 531 aa8.22□□□□□ -1.09
CDHR3-201ENST00000317716 NLGN1Q8N2Q7 840 aa8.22□□□□□ -1.09
CDHR3-201ENST00000317716 LPIN2Q92539 896 aa8.22□□□□□ -1.09
CDHR3-201ENST00000317716 STMN2Q93045 179 aa8.22□□□□□ -1.09
CDHR3-201ENST00000317716 GJA10Q969M2 543 aa8.22□□□□□ -1.09
CDHR3-201ENST00000317716 SEC16BQ96JE7 1060 aa8.22□□□□□ -1.09
CDHR3-201ENST00000317716 TRIM51Q9BSJ1 452 aa8.22□□□□□ -1.09
CDHR3-201ENST00000317716 FAM114A2Q9NRY5 505 aa8.22□□□□□ -1.09
CDHR3-201ENST00000317716 NARFQ9UHQ1 456 aa8.22□□□□□ -1.09
CDHR3-201ENST00000317716 AMFRQ9UKV5 643 aa8.22□□□□□ -1.09
CDHR3-201ENST00000317716 DLG5Q8TDM6 1919 aa8.22□□□□□ -1.09
CDHR3-201ENST00000317716 LRRD1A4D1F6 860 aa8.21□□□□□ -1.09
CDHR3-201ENST00000317716 SMCO2A6NFE2 343 aa8.21□□□□□ -1.09
CDHR3-201ENST00000317716 RAD51CO43502 376 aa8.21□□□□□ -1.09
CDHR3-201ENST00000317716 FGGP02679 453 aa8.21□□□□□ -1.09
CDHR3-201ENST00000317716 GLI1P08151 1106 aa8.21□□□□□ -1.09
CDHR3-201ENST00000317716 CCNE1P24864 410 aa8.21□□□□□ -1.09
CDHR3-201ENST00000317716 CTSWP56202 376 aa8.21□□□□□ -1.09
CDHR3-201ENST00000317716 TBX2Q13207 712 aaPredicted RBP8.21□□□□□ -1.09
CDHR3-201ENST00000317716 NONOQ15233 471 aaKnown RBP eCLIP8.21□□□□□ -1.09
CDHR3-201ENST00000317716 EARS2Q5JPH6 523 aaKnown RBP8.21□□□□□ -1.09
CDHR3-201ENST00000317716 LONP2Q86WA8 852 aa8.21□□□□□ -1.09
CDHR3-201ENST00000317716 ARMC2Q8NEN0 867 aa8.21□□□□□ -1.09
CDHR3-201ENST00000317716 STAMBPL1Q96FJ0 436 aa8.21□□□□□ -1.09
CDHR3-201ENST00000317716 AZI2Q9H6S1 392 aa8.21□□□□□ -1.09
CDHR3-201ENST00000317716 DISC1Q9NRI5 854 aa8.21□□□□□ -1.09
CDHR3-201ENST00000317716 KLHL14Q9P2G3 628 aa8.21□□□□□ -1.09
CDHR3-201ENST00000317716 PGRMC1O00264 195 aaKnown RBP8.21□□□□□ -1.1
CDHR3-201ENST00000317716 H2AFZP0C0S5 128 aa8.21□□□□□ -1.1
CDHR3-201ENST00000317716 PPP2R2AP63151 447 aa8.21□□□□□ -1.1
CDHR3-201ENST00000317716 RASGRF1Q13972 1273 aa8.21□□□□□ -1.1
CDHR3-201ENST00000317716 CALCRLQ16602 461 aa8.21□□□□□ -1.1
CDHR3-201ENST00000317716 TSNAXIP1Q2TAA8 658 aa8.21□□□□□ -1.1
CDHR3-201ENST00000317716 HP1BP3Q5SSJ5 553 aaPredicted RBP8.21□□□□□ -1.1
CDHR3-201ENST00000317716 WDR93Q6P2C0 686 aa8.21□□□□□ -1.1
CDHR3-201ENST00000317716 H2AFVQ71UI9 128 aa8.21□□□□□ -1.1
CDHR3-201ENST00000317716 MYOCDQ8IZQ8 938 aa8.21□□□□□ -1.1
CDHR3-201ENST00000317716 PNMA1Q8ND90 353 aa8.21□□□□□ -1.1
CDHR3-201ENST00000317716 MCUR1Q96AQ8 359 aa8.21□□□□□ -1.1
CDHR3-201ENST00000317716 CALR3Q96L12 384 aaKnown RBP8.21□□□□□ -1.1
CDHR3-201ENST00000317716 FMO2Q99518 471 aa8.21□□□□□ -1.1
CDHR3-201ENST00000317716 MAP3K14Q99558 947 aa8.21□□□□□ -1.1
CDHR3-201ENST00000317716 RNF26Q9BY78 433 aaPredicted RBP8.21□□□□□ -1.1
CDHR3-201ENST00000317716 PRM3Q9NNZ6 103 aa8.21□□□□□ -1.1
CDHR3-201ENST00000317716 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.21□□□□□ -1.1
CDHR3-201ENST00000317716 DONSONQ9NYP3 566 aa8.21□□□□□ -1.1
CDHR3-201ENST00000317716 NOP53Q9NZM5 478 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms