RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 ANGEL2Q5VTE6 544 aaKnown RBP5.32□□□□□ -1.56
SMCO3-201ENST00000316048 SLCO6A1Q86UG4 719 aa5.32□□□□□ -1.56
SMCO3-201ENST00000316048 C11orf74Q86VG3 221 aa5.32□□□□□ -1.56
SMCO3-201ENST00000316048 FUBP3Q96I24 572 aaKnown RBP eCLIP5.32□□□□□ -1.56
SMCO3-201ENST00000316048 HRASLS5Q96KN8 279 aa5.32□□□□□ -1.56
SMCO3-201ENST00000316048 BOCQ9BWV1 1114 aa5.32□□□□□ -1.56
SMCO3-201ENST00000316048 TOPORSQ9NS56 1045 aaPredicted RBP5.32□□□□□ -1.56
SMCO3-201ENST00000316048 KIF27Q86VH2 1401 aa5.31□□□□□ -1.56
SMCO3-201ENST00000316048 FANCD2Q9BXW9 1451 aa5.31□□□□□ -1.56
SMCO3-201ENST00000316048 KIF21BO75037 1637 aa5.31□□□□□ -1.56
SMCO3-201ENST00000316048 RNF225M0QZC1 329 aaPredicted RBP5.31□□□□□ -1.56
SMCO3-201ENST00000316048 FOSL1P15407 271 aa5.31□□□□□ -1.56
SMCO3-201ENST00000316048 ZSCAN20P17040 1043 aaPredicted RBP5.31□□□□□ -1.56
SMCO3-201ENST00000316048 SCAND1P57086 179 aa5.31□□□□□ -1.56
SMCO3-201ENST00000316048 ODF1Q14990 250 aa5.31□□□□□ -1.56
SMCO3-201ENST00000316048 PASD1Q8IV76 773 aa5.31□□□□□ -1.56
SMCO3-201ENST00000316048 TPH2Q8IWU9 490 aa5.31□□□□□ -1.56
SMCO3-201ENST00000316048 EFHBQ8N7U6 833 aa5.31□□□□□ -1.56
SMCO3-201ENST00000316048 KIAA1958Q8N8K9 716 aa5.31□□□□□ -1.56
SMCO3-201ENST00000316048 JPH3Q8WXH2 748 aaPredicted RBP5.31□□□□□ -1.56
SMCO3-201ENST00000316048 MTA3Q9BTC8 594 aa5.31□□□□□ -1.56
SMCO3-201ENST00000316048 ADAMTS10Q9H324 1103 aa5.31□□□□□ -1.56
SMCO3-201ENST00000316048 SLC12A8A0AV02 714 aa5.3□□□□□ -1.56
SMCO3-201ENST00000316048 H7BY64 318 aa5.3□□□□□ -1.56
SMCO3-201ENST00000316048 K7ESF4 209 aa5.3□□□□□ -1.56
SMCO3-201ENST00000316048 SCDO00767 359 aa5.3□□□□□ -1.56
SMCO3-201ENST00000316048 GSTA4O15217 222 aa5.3□□□□□ -1.56
SMCO3-201ENST00000316048 LTFP02788 710 aa5.3□□□□□ -1.56
SMCO3-201ENST00000316048 GTF2A2P52657 109 aa5.3□□□□□ -1.56
SMCO3-201ENST00000316048 KIF11P52732 1056 aa5.3□□□□□ -1.56
SMCO3-201ENST00000316048 KLF1Q13351 362 aaPredicted RBP5.3□□□□□ -1.56
SMCO3-201ENST00000316048 TCIRG1Q13488 830 aa5.3□□□□□ -1.56
SMCO3-201ENST00000316048 GPR19Q15760 415 aa5.3□□□□□ -1.56
SMCO3-201ENST00000316048 MAP9Q49MG5 647 aa5.3□□□□□ -1.56
SMCO3-201ENST00000316048 HABP4Q5JVS0 413 aaKnown RBP5.3□□□□□ -1.56
SMCO3-201ENST00000316048 CEP162Q5TB80 1403 aa5.3□□□□□ -1.56
SMCO3-201ENST00000316048 HLA-DQA1Q5Y7H0 255 aa5.3□□□□□ -1.56
SMCO3-201ENST00000316048 ESRP1Q6NXG1 681 aaKnown RBP5.3□□□□□ -1.56
SMCO3-201ENST00000316048 HHIPL2Q6UWX4 724 aa5.3□□□□□ -1.56
SMCO3-201ENST00000316048 ZNF574Q6ZN55 896 aaPredicted RBP5.3□□□□□ -1.56
SMCO3-201ENST00000316048 OTOP3Q7RTS5 596 aa5.3□□□□□ -1.56
SMCO3-201ENST00000316048 WFDC3Q8IUB2 231 aa5.3□□□□□ -1.56
SMCO3-201ENST00000316048 TTC8Q8TAM2 541 aa5.3□□□□□ -1.56
SMCO3-201ENST00000316048 LINC01599Q8WXQ3 324 aa5.3□□□□□ -1.56
SMCO3-201ENST00000316048 PLCD4Q9BRC7 762 aa5.3□□□□□ -1.56
SMCO3-201ENST00000316048 PRDM7Q9NQW5 492 aa5.3□□□□□ -1.56
SMCO3-201ENST00000316048 IMPACTQ9P2X3 320 aa5.3□□□□□ -1.56
SMCO3-201ENST00000316048 TELO2Q9Y4R8 837 aa5.3□□□□□ -1.56
SMCO3-201ENST00000316048 SNX11Q9Y5W9 270 aa5.3□□□□□ -1.56
SMCO3-201ENST00000316048 LAMC3Q9Y6N6 1575 aa5.3□□□□□ -1.56
SMCO3-201ENST00000316048 ARID4BQ4LE39 1312 aaPredicted RBP5.3□□□□□ -1.56
SMCO3-201ENST00000316048 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.3□□□□□ -1.56
SMCO3-201ENST00000316048 H7C1D1 291 aa5.3□□□□□ -1.56
SMCO3-201ENST00000316048 ULK1O75385 1050 aa5.3□□□□□ -1.56
SMCO3-201ENST00000316048 ZGLP1P0C6A0 271 aa5.3□□□□□ -1.56
SMCO3-201ENST00000316048 TMEM253P0C7T8 217 aa5.3□□□□□ -1.56
SMCO3-201ENST00000316048 SMAD3P84022 425 aaKnown RBP5.3□□□□□ -1.56
SMCO3-201ENST00000316048 OCRLQ01968 901 aa5.3□□□□□ -1.56
SMCO3-201ENST00000316048 RASSF7Q02833 373 aa5.3□□□□□ -1.56
SMCO3-201ENST00000316048 IKZF1Q13422 519 aa5.3□□□□□ -1.56
SMCO3-201ENST00000316048 PDCD1Q15116 288 aa5.3□□□□□ -1.56
SMCO3-201ENST00000316048 TERF2Q15554 542 aa5.3□□□□□ -1.56
SMCO3-201ENST00000316048 SMAD2Q15796 467 aaKnown RBP5.3□□□□□ -1.56
SMCO3-201ENST00000316048 C1orf162Q8NEQ5 155 aaPredicted RBP5.3□□□□□ -1.56
SMCO3-201ENST00000316048 MENTQ9BUN1 341 aa5.3□□□□□ -1.56
SMCO3-201ENST00000316048 TOMM22Q9NS69 142 aa5.3□□□□□ -1.56
SMCO3-201ENST00000316048 X6R8D5 127 aa5.3□□□□□ -1.56
SMCO3-201ENST00000316048 PDS5BQ9NTI5 1447 aa5.29□□□□□ -1.56
SMCO3-201ENST00000316048 PCDHGA12O60330 932 aa5.29□□□□□ -1.56
SMCO3-201ENST00000316048 ENDOUP21128 410 aaKnown RBP5.29□□□□□ -1.56
SMCO3-201ENST00000316048 GALK1P51570 392 aa5.29□□□□□ -1.56
SMCO3-201ENST00000316048 SESN3P58005 492 aa5.29□□□□□ -1.56
SMCO3-201ENST00000316048 MLC1Q15049 377 aa5.29□□□□□ -1.56
SMCO3-201ENST00000316048 MSMPQ1L6U9 139 aa5.29□□□□□ -1.56
SMCO3-201ENST00000316048 RSPO4Q2I0M5 234 aaPredicted RBP5.29□□□□□ -1.56
SMCO3-201ENST00000316048 HSF5Q4G112 596 aaPredicted RBP5.29□□□□□ -1.56
SMCO3-201ENST00000316048 NKAPLQ5M9Q1 402 aa5.29□□□□□ -1.56
SMCO3-201ENST00000316048 FAM102BQ5T8I3 360 aa5.29□□□□□ -1.56
SMCO3-201ENST00000316048 CEP128Q6ZU80 1094 aa5.29□□□□□ -1.56
SMCO3-201ENST00000316048 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.29□□□□□ -1.56
SMCO3-201ENST00000316048 TGFBRAP1Q8WUH2 860 aa5.29□□□□□ -1.56
SMCO3-201ENST00000316048 ASB11Q8WXH4 323 aa5.29□□□□□ -1.56
SMCO3-201ENST00000316048 EPB41L1Q9H4G0 881 aa5.29□□□□□ -1.56
SMCO3-201ENST00000316048 ZMAT4Q9H898 229 aa5.29□□□□□ -1.56
SMCO3-201ENST00000316048 RXFP1Q9HBX9 757 aa5.29□□□□□ -1.56
SMCO3-201ENST00000316048 LUC7LQ9NQ29 371 aaKnown RBP5.29□□□□□ -1.56
SMCO3-201ENST00000316048 SLAMF8Q9P0V8 285 aa5.29□□□□□ -1.56
SMCO3-201ENST00000316048 SRPK3Q9UPE1 567 aa5.29□□□□□ -1.56
SMCO3-201ENST00000316048 SIT1Q9Y3P8 196 aa5.29□□□□□ -1.56
SMCO3-201ENST00000316048 PCDHGA9Q9Y5G4 932 aaKnown RBP5.29□□□□□ -1.56
SMCO3-201ENST00000316048 PCDHGA8Q9Y5G5 932 aa5.29□□□□□ -1.56
SMCO3-201ENST00000316048 PCDHGA7Q9Y5G6 932 aa5.29□□□□□ -1.56
SMCO3-201ENST00000316048 PCDHGA6Q9Y5G7 932 aa5.29□□□□□ -1.56
SMCO3-201ENST00000316048 PCDHGA3Q9Y5H0 932 aa5.29□□□□□ -1.56
SMCO3-201ENST00000316048 PCDHGA2Q9Y5H1 932 aa5.29□□□□□ -1.56
SMCO3-201ENST00000316048 SPO11Q9Y5K1 396 aa5.29□□□□□ -1.56
SMCO3-201ENST00000316048 NOTOA8MTQ0 251 aa5.29□□□□□ -1.56
SMCO3-201ENST00000316048 NTRK1P04629 796 aa5.29□□□□□ -1.56
SMCO3-201ENST00000316048 RTP1P59025 263 aa5.29□□□□□ -1.56
SMCO3-201ENST00000316048 LRRC32Q14392 662 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms