RNA–Protein interactions for RNA: ENST00000315713.5

ABCD3-201, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCD3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-201ENST00000315713 STK3Q13188 491 aa13.92□□□□□ -0.18
ABCD3-201ENST00000315713 ARHGEF16Q5VV41 709 aa13.92□□□□□ -0.18
ABCD3-201ENST00000315713 NFRKBQ6P4R8 1299 aa13.92□□□□□ -0.18
ABCD3-201ENST00000315713 SPRED2Q7Z698 418 aa13.92□□□□□ -0.18
ABCD3-201ENST00000315713 SMARCC2Q8TAQ2 1214 aa13.92□□□□□ -0.18
ABCD3-201ENST00000315713 NSUN6Q8TEA1 469 aaKnown RBP13.92□□□□□ -0.18
ABCD3-201ENST00000315713 SCFD2Q8WU76 684 aa13.92□□□□□ -0.18
ABCD3-201ENST00000315713 ARNTL2Q8WYA1 636 aa13.92□□□□□ -0.18
ABCD3-201ENST00000315713 GPKOWQ92917 476 aaPredicted RBP eCLIP13.92□□□□□ -0.18
ABCD3-201ENST00000315713 IL17RAQ96F46 866 aa13.92□□□□□ -0.18
ABCD3-201ENST00000315713 ZNF274Q96GC6 653 aaPredicted RBP13.92□□□□□ -0.18
ABCD3-201ENST00000315713 RMDN3Q96TC7 470 aa13.92□□□□□ -0.18
ABCD3-201ENST00000315713 C22orf23Q9BZE7 217 aa13.92□□□□□ -0.18
ABCD3-201ENST00000315713 COL20A1Q9P218 1284 aa13.92□□□□□ -0.18
ABCD3-201ENST00000315713 V9GY48 417 aaPredicted RBP13.92□□□□□ -0.18
ABCD3-201ENST00000315713 RALGAPA2Q2PPJ7 1873 aa13.91□□□□□ -0.18
ABCD3-201ENST00000315713 RBAK-RBAKDNI3L0D1 243 aa13.91□□□□□ -0.18
ABCD3-201ENST00000315713 CPLX1O14810 134 aa13.91□□□□□ -0.18
ABCD3-201ENST00000315713 NKRFO15226 690 aaKnown RBP eCLIP13.91□□□□□ -0.18
ABCD3-201ENST00000315713 GTPBP6O43824 516 aaPredicted RBP13.91□□□□□ -0.18
ABCD3-201ENST00000315713 IQCF3P0C7M6 154 aa13.91□□□□□ -0.18
ABCD3-201ENST00000315713 EIF2AK2P19525 551 aaKnown RBP13.91□□□□□ -0.18
ABCD3-201ENST00000315713 AK2P54819 239 aa13.91□□□□□ -0.18
ABCD3-201ENST00000315713 GHRHRQ02643 423 aa13.91□□□□□ -0.18
ABCD3-201ENST00000315713 TAP1Q03518 808 aa13.91□□□□□ -0.18
ABCD3-201ENST00000315713 FUT2Q10981 343 aa13.91□□□□□ -0.18
ABCD3-201ENST00000315713 BRDTQ58F21 947 aaPredicted RBP13.91□□□□□ -0.18
ABCD3-201ENST00000315713 FCHSD1Q86WN1 690 aa13.91□□□□□ -0.18
ABCD3-201ENST00000315713 FTOQ9C0B1 505 aaKnown RBP eCLIP13.91□□□□□ -0.18
ABCD3-201ENST00000315713 SLKQ9H2G2 1235 aaPredicted RBP13.91□□□□□ -0.18
ABCD3-201ENST00000315713 NCOA5Q9HCD5 579 aaKnown RBP13.91□□□□□ -0.18
ABCD3-201ENST00000315713 MYO7AQ13402 2215 aa13.91□□□□□ -0.18
ABCD3-201ENST00000315713 A6NJR5 290 aa13.9□□□□□ -0.18
ABCD3-201ENST00000315713 hCG_1984214I3L0E3 225 aa13.9□□□□□ -0.18
ABCD3-201ENST00000315713 NAPAP54920 295 aa13.9□□□□□ -0.18
ABCD3-201ENST00000315713 BFSP2Q13515 415 aa13.9□□□□□ -0.18
ABCD3-201ENST00000315713 AAK1Q2M2I8 961 aa13.9□□□□□ -0.18
ABCD3-201ENST00000315713 WWC2Q6AWC2 1192 aa13.9□□□□□ -0.18
ABCD3-201ENST00000315713 CPLX2Q6PUV4 134 aaKnown RBP13.9□□□□□ -0.18
ABCD3-201ENST00000315713 HERC6Q8IVU3 1022 aa13.9□□□□□ -0.18
ABCD3-201ENST00000315713 ZNF713Q8N859 430 aaPredicted RBP13.9□□□□□ -0.18
ABCD3-201ENST00000315713 RETREG2Q8NC44 543 aa13.9□□□□□ -0.18
ABCD3-201ENST00000315713 PHKBQ93100 1093 aa13.9□□□□□ -0.18
ABCD3-201ENST00000315713 IWS1Q96ST2 819 aa13.9□□□□□ -0.18
ABCD3-201ENST00000315713 SLC26A6Q9BXS9 759 aa13.9□□□□□ -0.18
ABCD3-201ENST00000315713 PSTPIP2Q9H939 334 aa13.9□□□□□ -0.18
ABCD3-201ENST00000315713 PXMP2Q9NR77 195 aa13.9□□□□□ -0.18
ABCD3-201ENST00000315713 NOD1Q9Y239 953 aa13.9□□□□□ -0.18
ABCD3-201ENST00000315713 PRPF3O43395 683 aaKnown RBP13.89□□□□□ -0.19
ABCD3-201ENST00000315713 PPFIA3O75145 1194 aa13.89□□□□□ -0.19
ABCD3-201ENST00000315713 TXNP10599 105 aaKnown RBP13.89□□□□□ -0.19
ABCD3-201ENST00000315713 POU3F3P20264 500 aaPredicted RBP13.89□□□□□ -0.19
ABCD3-201ENST00000315713 PLA2G5P39877 138 aa13.89□□□□□ -0.19
ABCD3-201ENST00000315713 PFKFB3Q16875 520 aaPredicted RBP13.89□□□□□ -0.19
ABCD3-201ENST00000315713 USP17L6PQ6QN14 398 aa13.89□□□□□ -0.19
ABCD3-201ENST00000315713 TMCO2Q7Z6W1 182 aaPredicted RBP13.89□□□□□ -0.19
ABCD3-201ENST00000315713 TRIM22Q8IYM9 498 aa13.89□□□□□ -0.19
ABCD3-201ENST00000315713 AFG1LQ8WV93 481 aa13.89□□□□□ -0.19
ABCD3-201ENST00000315713 CTAGE1Q96RT6 745 aa13.89□□□□□ -0.19
ABCD3-201ENST00000315713 RNF26Q9BY78 433 aaPredicted RBP13.89□□□□□ -0.19
ABCD3-201ENST00000315713 TPCN1Q9ULQ1 816 aa13.89□□□□□ -0.19
ABCD3-201ENST00000315713 LOXHD1Q8IVV2 1947 aa13.89□□□□□ -0.19
ABCD3-201ENST00000315713 MUC6Q6W4X9 2439 aa13.89□□□□□ -0.19
ABCD3-201ENST00000315713 LCHNA4D1U4 455 aa13.88□□□□□ -0.19
ABCD3-201ENST00000315713 KPNA6O60684 536 aa13.88□□□□□ -0.19
ABCD3-201ENST00000315713 NR3C2P08235 984 aa13.88□□□□□ -0.19
ABCD3-201ENST00000315713 MMP3P08254 477 aa13.88□□□□□ -0.19
ABCD3-201ENST00000315713 MYCLP12524 364 aaPredicted RBP13.88□□□□□ -0.19
ABCD3-201ENST00000315713 SCG2P13521 617 aa13.88□□□□□ -0.19
ABCD3-201ENST00000315713 IFNAR1P17181 557 aa13.88□□□□□ -0.19
ABCD3-201ENST00000315713 RBM25P49756 843 aaKnown RBP13.88□□□□□ -0.19
ABCD3-201ENST00000315713 WDR5P61964 334 aaKnown RBP13.88□□□□□ -0.19
ABCD3-201ENST00000315713 PTPN11Q06124 597 aaPredicted RBP13.88□□□□□ -0.19
ABCD3-201ENST00000315713 SSRP1Q08945 709 aaKnown RBP13.88□□□□□ -0.19
ABCD3-201ENST00000315713 GRB10Q13322 594 aa13.88□□□□□ -0.19
ABCD3-201ENST00000315713 STXBP2Q15833 593 aa13.88□□□□□ -0.19
ABCD3-201ENST00000315713 NTRK3Q16288 839 aa13.88□□□□□ -0.19
ABCD3-201ENST00000315713 PTGISQ16647 500 aa13.88□□□□□ -0.19
ABCD3-201ENST00000315713 GDF6Q6KF10 455 aaPredicted RBP13.88□□□□□ -0.19
ABCD3-201ENST00000315713 PPP1R18Q6NYC8 613 aa13.88□□□□□ -0.19
ABCD3-201ENST00000315713 PHOSPHO2Q8TCD6 241 aa13.88□□□□□ -0.19
ABCD3-201ENST00000315713 GDPD5Q8WTR4 605 aa13.88□□□□□ -0.19
ABCD3-201ENST00000315713 DHX38Q92620 1227 aaKnown RBP13.88□□□□□ -0.19
ABCD3-201ENST00000315713 PDCD2LQ9BRP1 358 aa13.88□□□□□ -0.19
ABCD3-201ENST00000315713 RNF216Q9NWF9 866 aaPredicted RBP13.88□□□□□ -0.19
ABCD3-201ENST00000315713 BARHL2Q9NY43 387 aa13.88□□□□□ -0.19
ABCD3-201ENST00000315713 C5orf42Q9H799 3197 aa13.87□□□□□ -0.19
ABCD3-201ENST00000315713 STXBP3O00186 592 aa13.87□□□□□ -0.19
ABCD3-201ENST00000315713 PIK3CDO00329 1044 aa13.87□□□□□ -0.19
ABCD3-201ENST00000315713 MEIS2O14770 477 aa13.87□□□□□ -0.19
ABCD3-201ENST00000315713 TLL1O43897 1013 aa13.87□□□□□ -0.19
ABCD3-201ENST00000315713 LPXNO60711 386 aa13.87□□□□□ -0.19
ABCD3-201ENST00000315713 CDKL5O76039 1030 aa13.87□□□□□ -0.19
ABCD3-201ENST00000315713 BAIAP3O94812 1187 aa13.87□□□□□ -0.19
ABCD3-201ENST00000315713 CCND2P30279 289 aa13.87□□□□□ -0.19
ABCD3-201ENST00000315713 KCNJ6P48051 423 aa13.87□□□□□ -0.19
ABCD3-201ENST00000315713 ADCY7P51828 1080 aa13.87□□□□□ -0.19
ABCD3-201ENST00000315713 DEFB103AP81534 67 aa13.87□□□□□ -0.19
ABCD3-201ENST00000315713 ARHGAP1Q07960 439 aa13.87□□□□□ -0.19
ABCD3-201ENST00000315713 SCRN1Q12765 414 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms