RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 CCSER1Q9C0I3 900 aa15.02■□□□□ -0
DDX54-202ENST00000314045 EPN1Q9Y6I3 576 aaPredicted RBP15.02■□□□□ -0
DDX54-202ENST00000314045 PVALEFA0A1B0GWK0 134 aa15.02□□□□□ -0.01
DDX54-202ENST00000314045 TUBB4BP68371 445 aa15.02□□□□□ -0.01
DDX54-202ENST00000314045 BMS1Q14692 1282 aaKnown RBP15.02□□□□□ -0.01
DDX54-202ENST00000314045 NTRK3Q16288 839 aa15.02□□□□□ -0.01
DDX54-202ENST00000314045 RAD54LQ92698 747 aa15.02□□□□□ -0.01
DDX54-202ENST00000314045 FAM184BQ9ULE4 1060 aa15.02□□□□□ -0.01
DDX54-202ENST00000314045 PYCARDQ9ULZ3 195 aa15.02□□□□□ -0.01
DDX54-202ENST00000314045 DLG5Q8TDM6 1919 aa15.02□□□□□ -0.01
DDX54-202ENST00000314045 C19orf81C9J6K1 198 aa15.01□□□□□ -0.01
DDX54-202ENST00000314045 KIF4AO95239 1232 aa15.01□□□□□ -0.01
DDX54-202ENST00000314045 LRRC63Q05C16 580 aa15.01□□□□□ -0.01
DDX54-202ENST00000314045 CRY2Q49AN0 593 aa15.01□□□□□ -0.01
DDX54-202ENST00000314045 DYDC2Q96IM9 177 aa15.01□□□□□ -0.01
DDX54-202ENST00000314045 CARD6Q9BX69 1037 aa15.01□□□□□ -0.01
DDX54-202ENST00000314045 PCIF1Q9H4Z3 704 aa15.01□□□□□ -0.01
DDX54-202ENST00000314045 CTNND1O60716 968 aaKnown RBP15.01□□□□□ -0.01
DDX54-202ENST00000314045 JAK3P52333 1124 aa15.01□□□□□ -0.01
DDX54-202ENST00000314045 KRT76Q01546 638 aa15.01□□□□□ -0.01
DDX54-202ENST00000314045 BANK1Q8NDB2 785 aa15.01□□□□□ -0.01
DDX54-202ENST00000314045 TEX13BQ9BXU2 312 aa15.01□□□□□ -0.01
DDX54-202ENST00000314045 EHD4Q9H223 541 aa15.01□□□□□ -0.01
DDX54-202ENST00000314045 TMEM206Q9H813 350 aa15.01□□□□□ -0.01
DDX54-202ENST00000314045 PPP2R2CQ9Y2T4 447 aa15.01□□□□□ -0.01
DDX54-202ENST00000314045 HOXA7P31268 230 aaPredicted RBP15.01□□□□□ -0.01
DDX54-202ENST00000314045 MAP3K9P80192 1104 aa15.01□□□□□ -0.01
DDX54-202ENST00000314045 FBXL16Q8N461 479 aa15.01□□□□□ -0.01
DDX54-202ENST00000314045 U2AF1L4Q8WU68 220 aaKnown RBP15.01□□□□□ -0.01
DDX54-202ENST00000314045 THAP9Q9H5L6 903 aa15.01□□□□□ -0.01
DDX54-202ENST00000314045 FBXO28Q9NVF7 368 aa15.01□□□□□ -0.01
DDX54-202ENST00000314045 FAM170AA1A519 330 aa15.01□□□□□ -0.01
DDX54-202ENST00000314045 RIOK3O14730 519 aaKnown RBP15.01□□□□□ -0.01
DDX54-202ENST00000314045 POLR3GO15318 223 aaPredicted RBP15.01□□□□□ -0.01
DDX54-202ENST00000314045 GRIN3BO60391 1043 aa15.01□□□□□ -0.01
DDX54-202ENST00000314045 CAP2P40123 477 aa15.01□□□□□ -0.01
DDX54-202ENST00000314045 PRCPP42785 496 aa15.01□□□□□ -0.01
DDX54-202ENST00000314045 RNASE9P60153 205 aaKnown RBP15.01□□□□□ -0.01
DDX54-202ENST00000314045 PDIA5Q14554 519 aa15.01□□□□□ -0.01
DDX54-202ENST00000314045 APOBEC3HQ6NTF7 200 aaKnown RBP15.01□□□□□ -0.01
DDX54-202ENST00000314045 BCCIPQ9P287 314 aaKnown RBP eCLIP15.01□□□□□ -0.01
DDX54-202ENST00000314045 LIN9Q5TKA1 542 aa15□□□□□ -0.01
DDX54-202ENST00000314045 METTL16Q86W50 562 aaKnown RBP15□□□□□ -0.01
DDX54-202ENST00000314045 PSMB7Q99436 277 aa15□□□□□ -0.01
DDX54-202ENST00000314045 C1orf112Q9NSG2 853 aa15□□□□□ -0.01
DDX54-202ENST00000314045 ESYT2A0FGR8 921 aa15□□□□□ -0.01
DDX54-202ENST00000314045 ECE1P42892 770 aa15□□□□□ -0.01
DDX54-202ENST00000314045 ETF1P62495 437 aaKnown RBP15□□□□□ -0.01
DDX54-202ENST00000314045 TFDP1Q14186 410 aa15□□□□□ -0.01
DDX54-202ENST00000314045 KRT31Q15323 416 aa15□□□□□ -0.01
DDX54-202ENST00000314045 AP5M1Q9H0R1 490 aa15□□□□□ -0.01
DDX54-202ENST00000314045 DDX4Q9NQI0 724 aaKnown RBP15□□□□□ -0.01
DDX54-202ENST00000314045 PEX3P56589 373 aa15□□□□□ -0.01
DDX54-202ENST00000314045 RBL2Q08999 1139 aa15□□□□□ -0.01
DDX54-202ENST00000314045 BAATQ14032 418 aaPredicted RBP15□□□□□ -0.01
DDX54-202ENST00000314045 VSTM4Q8IW00 320 aa15□□□□□ -0.01
DDX54-202ENST00000314045 TMEM60Q9H2L4 133 aa15□□□□□ -0.01
DDX54-202ENST00000314045 TNNC1P63316 161 aa14.99□□□□□ -0.01
DDX54-202ENST00000314045 CBX1P83916 185 aa14.99□□□□□ -0.01
DDX54-202ENST00000314045 PADI6Q6TGC4 694 aa14.99□□□□□ -0.01
DDX54-202ENST00000314045 MAATS1Q7Z4T9 603 aa14.99□□□□□ -0.01
DDX54-202ENST00000314045 SFR1Q86XK3 245 aa14.99□□□□□ -0.01
DDX54-202ENST00000314045 RETREG2Q8NC44 543 aa14.99□□□□□ -0.01
DDX54-202ENST00000314045 ERO1AQ96HE7 468 aa14.99□□□□□ -0.01
DDX54-202ENST00000314045 FERMT1Q9BQL6 677 aa14.99□□□□□ -0.01
DDX54-202ENST00000314045 TRIM49BA6NDI0 452 aa14.99□□□□□ -0.01
DDX54-202ENST00000314045 ZNF500O60304 480 aaPredicted RBP14.99□□□□□ -0.01
DDX54-202ENST00000314045 AFPP02771 609 aaKnown RBP14.99□□□□□ -0.01
DDX54-202ENST00000314045 P4HBP07237 508 aaKnown RBP14.99□□□□□ -0.01
DDX54-202ENST00000314045 GBP2P32456 591 aaPredicted RBP14.99□□□□□ -0.01
DDX54-202ENST00000314045 QARSP47897 775 aaKnown RBP14.99□□□□□ -0.01
DDX54-202ENST00000314045 RASSF7Q02833 373 aa14.99□□□□□ -0.01
DDX54-202ENST00000314045 POTEAQ6S8J7 498 aa14.99□□□□□ -0.01
DDX54-202ENST00000314045 FASTKD5Q7L8L6 764 aaKnown RBP14.99□□□□□ -0.01
DDX54-202ENST00000314045 AKT3Q9Y243 479 aa14.99□□□□□ -0.01
DDX54-202ENST00000314045 TMEM191BP0C7N4 346 aa14.99□□□□□ -0.01
DDX54-202ENST00000314045 MARK3P27448 753 aa14.99□□□□□ -0.01
DDX54-202ENST00000314045 SLC8A3P57103 927 aa14.99□□□□□ -0.01
DDX54-202ENST00000314045 NDST4Q9H3R1 872 aa14.99□□□□□ -0.01
DDX54-202ENST00000314045 IL17RBQ9NRM6 502 aa14.99□□□□□ -0.01
DDX54-202ENST00000314045 RASAL2Q9UJF2 1139 aa14.99□□□□□ -0.01
DDX54-202ENST00000314045 ST3GAL1Q11201 340 aa14.99□□□□□ -0.01
DDX54-202ENST00000314045 TUBB2AQ13885 445 aa14.99□□□□□ -0.01
DDX54-202ENST00000314045 TCP11X2Q5H9J9 407 aa14.99□□□□□ -0.01
DDX54-202ENST00000314045 TUBB2BQ9BVA1 445 aa14.99□□□□□ -0.01
DDX54-202ENST00000314045 MTUS1Q9ULD2 1270 aa14.99□□□□□ -0.01
DDX54-202ENST00000314045 TOPAZ1Q8N9V7 1692 aa14.98□□□□□ -0.01
DDX54-202ENST00000314045 SMIM22K7EJ46 135 aa14.98□□□□□ -0.01
DDX54-202ENST00000314045 ABCB4P21439 1286 aa14.98□□□□□ -0.01
DDX54-202ENST00000314045 SARM1Q6SZW1 724 aa14.98□□□□□ -0.01
DDX54-202ENST00000314045 NEK9Q8TD19 979 aa14.98□□□□□ -0.01
DDX54-202ENST00000314045 HAUS4Q9H6D7 363 aa14.98□□□□□ -0.01
DDX54-202ENST00000314045 CWC15Q9P013 229 aaKnown RBP14.98□□□□□ -0.01
DDX54-202ENST00000314045 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.98□□□□□ -0.01
DDX54-202ENST00000314045 ABCC6O95255 1503 aa14.98□□□□□ -0.01
DDX54-202ENST00000314045 LMO7Q8WWI1 1683 aa14.98□□□□□ -0.01
DDX54-202ENST00000314045 SHTN1A0MZ66 631 aa14.98□□□□□ -0.01
DDX54-202ENST00000314045 SHMT1P34896 483 aa14.98□□□□□ -0.01
DDX54-202ENST00000314045 CA8P35219 290 aa14.98□□□□□ -0.01
DDX54-202ENST00000314045 HACE1Q8IYU2 909 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms