RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 ARHGEF1Q92888 912 aaKnown RBP17.34■□□□□ 0.37
USP42-201ENST00000306177 ZNF653Q96CK0 615 aa17.34■□□□□ 0.37
USP42-201ENST00000306177 GCNT4Q9P109 453 aa17.34■□□□□ 0.37
USP42-201ENST00000306177 AKT3Q9Y243 479 aa17.34■□□□□ 0.37
USP42-201ENST00000306177 PCK1P35558 622 aa17.34■□□□□ 0.37
USP42-201ENST00000306177 GSDMBQ8TAX9 411 aa17.34■□□□□ 0.37
USP42-201ENST00000306177 CD209Q9NNX6 404 aa17.34■□□□□ 0.37
USP42-201ENST00000306177 CLTCQ00610 1675 aaKnown RBP17.33■□□□□ 0.37
USP42-201ENST00000306177 PTPN21Q16825 1174 aa17.33■□□□□ 0.37
USP42-201ENST00000306177 MIGA2Q7L4E1 593 aa17.33■□□□□ 0.37
USP42-201ENST00000306177 PCIF1Q9H4Z3 704 aa17.33■□□□□ 0.37
USP42-201ENST00000306177 KLHL14Q9P2G3 628 aa17.33■□□□□ 0.37
USP42-201ENST00000306177 AP3B2Q13367 1082 aa17.33■□□□□ 0.36
USP42-201ENST00000306177 DCAF4Q8WV16 495 aa17.33■□□□□ 0.36
USP42-201ENST00000306177 A6NJR5 290 aa17.33■□□□□ 0.36
USP42-201ENST00000306177 KCNQ2O43526 872 aa17.33■□□□□ 0.36
USP42-201ENST00000306177 CIAPIN1Q6FI81 312 aa17.33■□□□□ 0.36
USP42-201ENST00000306177 LMNTD2Q8IXW0 634 aa17.33■□□□□ 0.36
USP42-201ENST00000306177 FAM133AQ8N9E0 248 aa17.33■□□□□ 0.36
USP42-201ENST00000306177 RPS6KC1Q96S38 1066 aa17.33■□□□□ 0.36
USP42-201ENST00000306177 AFG3L2Q9Y4W6 797 aa17.33■□□□□ 0.36
USP42-201ENST00000306177 BUB1BO60566 1050 aaPredicted RBP17.33■□□□□ 0.36
USP42-201ENST00000306177 PPP4R3CPQ6ZMV5 832 aa17.33■□□□□ 0.36
USP42-201ENST00000306177 CAPS2Q9BXY5 557 aa17.33■□□□□ 0.36
USP42-201ENST00000306177 VCX3BQ9H321 246 aa17.33■□□□□ 0.36
USP42-201ENST00000306177 FAM114A2Q9NRY5 505 aa17.33■□□□□ 0.36
USP42-201ENST00000306177 RIPOR2Q9Y4F9 1068 aa17.33■□□□□ 0.36
USP42-201ENST00000306177 LRRN2O75325 713 aa17.32■□□□□ 0.36
USP42-201ENST00000306177 MAPK4P31152 587 aa17.32■□□□□ 0.36
USP42-201ENST00000306177 RCAN1P53805 252 aa17.32■□□□□ 0.36
USP42-201ENST00000306177 SF3A3Q12874 501 aaKnown RBP eCLIP17.32■□□□□ 0.36
USP42-201ENST00000306177 ALCAMQ13740 583 aa17.32■□□□□ 0.36
USP42-201ENST00000306177 DALRD3Q5D0E6 543 aaKnown RBP17.32■□□□□ 0.36
USP42-201ENST00000306177 PPP4R1Q8TF05 950 aa17.32■□□□□ 0.36
USP42-201ENST00000306177 MAGOHBQ96A72 148 aaKnown RBP17.32■□□□□ 0.36
USP42-201ENST00000306177 MTA3Q9BTC8 594 aa17.32■□□□□ 0.36
USP42-201ENST00000306177 DLC1Q96QB1 1528 aa17.32■□□□□ 0.36
USP42-201ENST00000306177 C21orf2O43822 256 aa17.32■□□□□ 0.36
USP42-201ENST00000306177 GJB4Q9NTQ9 266 aa17.32■□□□□ 0.36
USP42-201ENST00000306177 PSAPP07602 524 aa17.32■□□□□ 0.36
USP42-201ENST00000306177 ATP1A2P50993 1020 aa17.32■□□□□ 0.36
USP42-201ENST00000306177 C10orf76Q5T2E6 689 aa17.32■□□□□ 0.36
USP42-201ENST00000306177 CYB5R4Q7L1T6 521 aa17.32■□□□□ 0.36
USP42-201ENST00000306177 NME8Q8N427 588 aa17.32■□□□□ 0.36
USP42-201ENST00000306177 PANX2Q96RD6 677 aa17.32■□□□□ 0.36
USP42-201ENST00000306177 PTPRUQ92729 1446 aa17.32■□□□□ 0.36
USP42-201ENST00000306177 EIF3CLB5ME19 914 aaKnown RBP17.32■□□□□ 0.36
USP42-201ENST00000306177 CACNB3P54284 484 aa17.32■□□□□ 0.36
USP42-201ENST00000306177 ZSCAN26Q16670 478 aa17.32■□□□□ 0.36
USP42-201ENST00000306177 PFKFB3Q16875 520 aaPredicted RBP17.32■□□□□ 0.36
USP42-201ENST00000306177 CAPN12Q6ZSI9 719 aa17.32■□□□□ 0.36
USP42-201ENST00000306177 EIF3CQ99613 913 aaKnown RBP17.32■□□□□ 0.36
USP42-201ENST00000306177 NDST4Q9H3R1 872 aa17.32■□□□□ 0.36
USP42-201ENST00000306177 SEPT10Q9P0V9 454 aa17.32■□□□□ 0.36
USP42-201ENST00000306177 ATF5Q9Y2D1 282 aaPredicted RBP17.32■□□□□ 0.36
USP42-201ENST00000306177 SOWAHDA6NJG2 315 aa17.31■□□□□ 0.36
USP42-201ENST00000306177 PTPREP23469 700 aa17.31■□□□□ 0.36
USP42-201ENST00000306177 TSNAXIP1Q2TAA8 658 aa17.31■□□□□ 0.36
USP42-201ENST00000306177 TBC1D10BQ4KMP7 808 aaPredicted RBP17.31■□□□□ 0.36
USP42-201ENST00000306177 TCP11X2Q5H9J9 407 aa17.31■□□□□ 0.36
USP42-201ENST00000306177 ACRBPQ8NEB7 543 aa17.31■□□□□ 0.36
USP42-201ENST00000306177 APOL6Q9BWW8 343 aa17.31■□□□□ 0.36
USP42-201ENST00000306177 NHEJ1Q9H9Q4 299 aaPredicted RBP17.31■□□□□ 0.36
USP42-201ENST00000306177 RNF14Q9UBS8 474 aa17.31■□□□□ 0.36
USP42-201ENST00000306177 TACC3Q9Y6A5 838 aa17.31■□□□□ 0.36
USP42-201ENST00000306177 H7C0C1 242 aa17.31■□□□□ 0.36
USP42-201ENST00000306177 ATP5OP48047 213 aa17.31■□□□□ 0.36
USP42-201ENST00000306177 NAA25Q14CX7 972 aa17.31■□□□□ 0.36
USP42-201ENST00000306177 SERPING1P05155 500 aa17.31■□□□□ 0.36
USP42-201ENST00000306177 HOXA13P31271 388 aaPredicted RBP17.31■□□□□ 0.36
USP42-201ENST00000306177 IFT122Q9HBG6 1241 aa17.31■□□□□ 0.36
USP42-201ENST00000306177 PLEKHG2Q9H7P9 1386 aa17.31■□□□□ 0.36
USP42-201ENST00000306177 PGRMC1O00264 195 aaKnown RBP17.31■□□□□ 0.36
USP42-201ENST00000306177 GFPT2O94808 682 aa17.31■□□□□ 0.36
USP42-201ENST00000306177 CRKP46108 304 aa17.31■□□□□ 0.36
USP42-201ENST00000306177 MXI1P50539 228 aa17.31■□□□□ 0.36
USP42-201ENST00000306177 MB21D2Q8IYB1 491 aaPredicted RBP17.31■□□□□ 0.36
USP42-201ENST00000306177 ZNF579Q8NAF0 562 aaKnown RBP17.31■□□□□ 0.36
USP42-201ENST00000306177 DCP1AQ9NPI6 582 aaPredicted RBP17.31■□□□□ 0.36
USP42-201ENST00000306177 NUB1Q9Y5A7 615 aa17.31■□□□□ 0.36
USP42-201ENST00000306177 INO80Q9ULG1 1556 aaPredicted RBP17.3■□□□□ 0.36
USP42-201ENST00000306177 ABL1P00519 1130 aa17.3■□□□□ 0.36
USP42-201ENST00000306177 IFRD2Q12894 506 aaPredicted RBP17.3■□□□□ 0.36
USP42-201ENST00000306177 RABL6Q3YEC7 729 aaPredicted RBP17.3■□□□□ 0.36
USP42-201ENST00000306177 RSPH3Q86UC2 560 aa17.3■□□□□ 0.36
USP42-201ENST00000306177 UHMK1Q8TAS1 419 aaKnown RBP17.3■□□□□ 0.36
USP42-201ENST00000306177 TMEM47Q9BQJ4 181 aa17.3■□□□□ 0.36
USP42-201ENST00000306177 EIF4A3P38919 411 aaKnown RBP17.3■□□□□ 0.36
USP42-201ENST00000306177 MTERF2Q49AM1 385 aa17.3■□□□□ 0.36
USP42-201ENST00000306177 UBE2TQ9NPD8 197 aaPredicted RBP17.3■□□□□ 0.36
USP42-201ENST00000306177 A0A1B0GUA9 196 aa17.3■□□□□ 0.36
USP42-201ENST00000306177 ASNSP08243 561 aa17.3■□□□□ 0.36
USP42-201ENST00000306177 ARMC9Q7Z3E5 817 aa17.3■□□□□ 0.36
USP42-201ENST00000306177 SPATS2Q86XZ4 545 aaKnown RBP17.3■□□□□ 0.36
USP42-201ENST00000306177 RFX6Q8HWS3 928 aa17.3■□□□□ 0.36
USP42-201ENST00000306177 PTPN22Q9Y2R2 807 aa17.3■□□□□ 0.36
USP42-201ENST00000306177 MYO3AQ8NEV4 1616 aa17.3■□□□□ 0.36
USP42-201ENST00000306177 ATP8B1O43520 1251 aa17.3■□□□□ 0.36
USP42-201ENST00000306177 GH2P01242 217 aa17.3■□□□□ 0.36
USP42-201ENST00000306177 PDE11AQ9HCR9 933 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms