RNA–Protein interactions for RNA: ENST00000295057.3

LRRTM1-201, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRTM1, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-201ENST00000295057 RTKN2Q8IZC4 609 aa16.89■□□□□ 0.3
LRRTM1-201ENST00000295057 C4orf32Q8N8J7 132 aa16.89■□□□□ 0.3
LRRTM1-201ENST00000295057 EHBP1Q8NDI1 1231 aa16.89■□□□□ 0.3
LRRTM1-201ENST00000295057 CD248Q9HCU0 757 aa16.89■□□□□ 0.3
LRRTM1-201ENST00000295057 CAPN6Q9Y6Q1 641 aa16.89■□□□□ 0.3
LRRTM1-201ENST00000295057 CCDC189A1A4V9 331 aa16.89■□□□□ 0.29
LRRTM1-201ENST00000295057 PP2D1A8MPX8 630 aa16.89■□□□□ 0.29
LRRTM1-201ENST00000295057 ZNF263O14978 683 aa16.89■□□□□ 0.29
LRRTM1-201ENST00000295057 PPP1R11O60927 126 aaPredicted RBP16.89■□□□□ 0.29
LRRTM1-201ENST00000295057 GPIHBP1Q8IV16 184 aa16.89■□□□□ 0.29
LRRTM1-201ENST00000295057 ADGRF4Q8IZF3 695 aa16.89■□□□□ 0.29
LRRTM1-201ENST00000295057 SPATA4Q8NEY3 305 aa16.89■□□□□ 0.29
LRRTM1-201ENST00000295057 RIOX1Q9H6W3 641 aa16.89■□□□□ 0.29
LRRTM1-201ENST00000295057 JMJD4Q9H9V9 463 aa16.89■□□□□ 0.29
LRRTM1-201ENST00000295057 LRWD1Q9UFC0 647 aa16.89■□□□□ 0.29
LRRTM1-201ENST00000295057 SNX12Q9UMY4 172 aa16.89■□□□□ 0.29
LRRTM1-201ENST00000295057 ANO9A1A5B4 782 aa16.88■□□□□ 0.29
LRRTM1-201ENST00000295057 USP17L10C9JJH3 530 aa16.88■□□□□ 0.29
LRRTM1-201ENST00000295057 GTPBP6O43824 516 aaPredicted RBP16.88■□□□□ 0.29
LRRTM1-201ENST00000295057 SNHG28P0DPA3 235 aa16.88■□□□□ 0.29
LRRTM1-201ENST00000295057 SNAP25P60880 206 aa16.88■□□□□ 0.29
LRRTM1-201ENST00000295057 ZNF543Q08ER8 600 aa16.88■□□□□ 0.29
LRRTM1-201ENST00000295057 MEA1Q16626 185 aa16.88■□□□□ 0.29
LRRTM1-201ENST00000295057 MMGT1Q8N4V1 131 aa16.88■□□□□ 0.29
LRRTM1-201ENST00000295057 OTUD6BQ8N6M0 293 aa16.88■□□□□ 0.29
LRRTM1-201ENST00000295057 TACO1Q9BSH4 297 aaKnown RBP16.88■□□□□ 0.29
LRRTM1-201ENST00000295057 ZMYND12Q9H0C1 365 aa16.88■□□□□ 0.29
LRRTM1-201ENST00000295057 BCCIPQ9P287 314 aaKnown RBP eCLIP16.88■□□□□ 0.29
LRRTM1-201ENST00000295057 OPA1O60313 960 aa16.88■□□□□ 0.29
LRRTM1-201ENST00000295057 PLEKP08567 350 aaPredicted RBP16.88■□□□□ 0.29
LRRTM1-201ENST00000295057 CYLC1P35663 651 aaPredicted RBP16.88■□□□□ 0.29
LRRTM1-201ENST00000295057 SKOR1P84550 965 aa16.88■□□□□ 0.29
LRRTM1-201ENST00000295057 CABS1Q96KC9 395 aa16.88■□□□□ 0.29
LRRTM1-201ENST00000295057 ZIM3Q96PE6 472 aa16.88■□□□□ 0.29
LRRTM1-201ENST00000295057 PURBQ96QR8 312 aaKnown RBP16.88■□□□□ 0.29
LRRTM1-201ENST00000295057 CSRNP1Q96S65 589 aa16.88■□□□□ 0.29
LRRTM1-201ENST00000295057 DHX36Q9H2U1 1008 aaKnown RBP16.88■□□□□ 0.29
LRRTM1-201ENST00000295057 MLXIPQ9HAP2 919 aa16.88■□□□□ 0.29
LRRTM1-201ENST00000295057 A1CFQ9NQ94 594 aaKnown RBP16.88■□□□□ 0.29
LRRTM1-201ENST00000295057 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.88■□□□□ 0.29
LRRTM1-201ENST00000295057 SIPA1L1O43166 1804 aa16.88■□□□□ 0.29
LRRTM1-201ENST00000295057 H7C1D1 291 aa16.87■□□□□ 0.29
LRRTM1-201ENST00000295057 TRIM21P19474 475 aaKnown RBP16.87■□□□□ 0.29
LRRTM1-201ENST00000295057 GUCY1A3Q02108 690 aa16.87■□□□□ 0.29
LRRTM1-201ENST00000295057 APBA1Q02410 837 aa16.87■□□□□ 0.29
LRRTM1-201ENST00000295057 CCDC70Q6NSX1 233 aa16.87■□□□□ 0.29
LRRTM1-201ENST00000295057 NFRKBQ6P4R8 1299 aa16.87■□□□□ 0.29
LRRTM1-201ENST00000295057 ZNF662Q6ZS27 426 aa16.87■□□□□ 0.29
LRRTM1-201ENST00000295057 PSMD1Q99460 953 aa16.87■□□□□ 0.29
LRRTM1-201ENST00000295057 MYH10P35580 1976 aa16.87■□□□□ 0.29
LRRTM1-201ENST00000295057 A0A1W2PQC6 194 aa16.87■□□□□ 0.29
LRRTM1-201ENST00000295057 SPDYE2BA6NHP3 402 aa16.87■□□□□ 0.29
LRRTM1-201ENST00000295057 MEFVO15553 781 aaPredicted RBP16.87■□□□□ 0.29
LRRTM1-201ENST00000295057 SPDYE6P0CI01 402 aa16.87■□□□□ 0.29
LRRTM1-201ENST00000295057 TAL1P17542 331 aaPredicted RBP16.87■□□□□ 0.29
LRRTM1-201ENST00000295057 PPARDQ03181 441 aa16.87■□□□□ 0.29
LRRTM1-201ENST00000295057 LETM2Q2VYF4 491 aa16.87■□□□□ 0.29
LRRTM1-201ENST00000295057 IQCEQ6IPM2 695 aa16.87■□□□□ 0.29
LRRTM1-201ENST00000295057 GIMAP7Q8NHV1 300 aa16.87■□□□□ 0.29
LRRTM1-201ENST00000295057 RNPC3Q96LT9 517 aaKnown RBP16.87■□□□□ 0.29
LRRTM1-201ENST00000295057 RUFY1Q96T51 708 aa16.87■□□□□ 0.29
LRRTM1-201ENST00000295057 TTYH3Q9C0H2 523 aa16.87■□□□□ 0.29
LRRTM1-201ENST00000295057 VEZTQ9HBM0 779 aa16.87■□□□□ 0.29
LRRTM1-201ENST00000295057 NKRFO15226 690 aaKnown RBP eCLIP16.86■□□□□ 0.29
LRRTM1-201ENST00000295057 KIAA0754O94854 1291 aa16.86■□□□□ 0.29
LRRTM1-201ENST00000295057 VIL1P09327 827 aaKnown RBP16.86■□□□□ 0.29
LRRTM1-201ENST00000295057 EPB41P11171 864 aaKnown RBP16.86■□□□□ 0.29
LRRTM1-201ENST00000295057 TRAPPC10P48553 1259 aa16.86■□□□□ 0.29
LRRTM1-201ENST00000295057 KIF5AQ12840 1032 aa16.86■□□□□ 0.29
LRRTM1-201ENST00000295057 NNTQ13423 1086 aa16.86■□□□□ 0.29
LRRTM1-201ENST00000295057 ASPRV1Q53RT3 343 aa16.86■□□□□ 0.29
LRRTM1-201ENST00000295057 HAUS3Q68CZ6 603 aa16.86■□□□□ 0.29
LRRTM1-201ENST00000295057 CEP120Q8N960 986 aa16.86■□□□□ 0.29
LRRTM1-201ENST00000295057 GMLQ99445 158 aa16.86■□□□□ 0.29
LRRTM1-201ENST00000295057 PLIN2Q99541 437 aa16.86■□□□□ 0.29
LRRTM1-201ENST00000295057 HSF2BPO75031 334 aa16.86■□□□□ 0.29
LRRTM1-201ENST00000295057 IPO7O95373 1038 aaKnown RBP16.86■□□□□ 0.29
LRRTM1-201ENST00000295057 MOCS3O95396 460 aa16.86■□□□□ 0.29
LRRTM1-201ENST00000295057 GH2P01242 217 aa16.86■□□□□ 0.29
LRRTM1-201ENST00000295057 SOGA3Q5TF21 947 aa16.86■□□□□ 0.29
LRRTM1-201ENST00000295057 TATDN1Q6P1N9 297 aa16.86■□□□□ 0.29
LRRTM1-201ENST00000295057 ADSSL1Q8N142 457 aa16.86■□□□□ 0.29
LRRTM1-201ENST00000295057 DAGLBQ8NCG7 672 aa16.86■□□□□ 0.29
LRRTM1-201ENST00000295057 FSBPO95073 299 aa16.85■□□□□ 0.29
LRRTM1-201ENST00000295057 EPHB4P54760 987 aa16.85■□□□□ 0.29
LRRTM1-201ENST00000295057 R3HDM1Q15032 1099 aaKnown RBP16.85■□□□□ 0.29
LRRTM1-201ENST00000295057 UBE2SQ16763 222 aa16.85■□□□□ 0.29
LRRTM1-201ENST00000295057 B4GALNT4Q76KP1 1039 aa16.85■□□□□ 0.29
LRRTM1-201ENST00000295057 C6orf50Q9HD87 102 aa16.85■□□□□ 0.29
LRRTM1-201ENST00000295057 PIM2Q9P1W9 311 aa16.85■□□□□ 0.29
LRRTM1-201ENST00000295057 NCK2O43639 380 aa16.85■□□□□ 0.29
LRRTM1-201ENST00000295057 CCNT1O60563 726 aaKnown RBP16.85■□□□□ 0.29
LRRTM1-201ENST00000295057 LSP1P33241 339 aa16.85■□□□□ 0.29
LRRTM1-201ENST00000295057 SEC24CP53992 1094 aa16.85■□□□□ 0.29
LRRTM1-201ENST00000295057 ICA1Q05084 483 aa16.85■□□□□ 0.29
LRRTM1-201ENST00000295057 CXCL9Q07325 125 aa16.85■□□□□ 0.29
LRRTM1-201ENST00000295057 DLGAP5Q15398 846 aa16.85■□□□□ 0.29
LRRTM1-201ENST00000295057 ABCB5Q2M3G0 1257 aa16.85■□□□□ 0.29
LRRTM1-201ENST00000295057 NAA35Q5VZE5 725 aa16.85■□□□□ 0.29
LRRTM1-201ENST00000295057 TRIM47Q96LD4 638 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms