RNA–Protein interactions for RNA: ENST00000288723.8

RAB28-201, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RAB28, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-201ENST00000288723 AIFM3Q96NN9 605 aa23.4■■□□□ 1.34
RAB28-201ENST00000288723 SENP7Q9BQF6 1050 aa23.4■■□□□ 1.34
RAB28-201ENST00000288723 C16orf70Q9BSU1 422 aa23.4■■□□□ 1.34
RAB28-201ENST00000288723 DOCK5Q9H7D0 1870 aa23.4■■□□□ 1.34
RAB28-201ENST00000288723 SUPT20HL2P0C7V6 817 aa23.4■■□□□ 1.34
RAB28-201ENST00000288723 KCNA2P16389 499 aa23.4■■□□□ 1.34
RAB28-201ENST00000288723 ANKRD1Q15327 319 aa23.4■■□□□ 1.34
RAB28-201ENST00000288723 CPLX2Q6PUV4 134 aaKnown RBP23.4■■□□□ 1.34
RAB28-201ENST00000288723 TEX2Q8IWB9 1127 aa23.4■■□□□ 1.34
RAB28-201ENST00000288723 GPR20Q99678 358 aa23.4■■□□□ 1.34
RAB28-201ENST00000288723 MXRA8Q9BRK3 442 aa23.4■■□□□ 1.34
RAB28-201ENST00000288723 HDAC6Q9UBN7 1215 aa23.4■■□□□ 1.34
RAB28-201ENST00000288723 PFKFB2O60825 505 aa23.39■■□□□ 1.33
RAB28-201ENST00000288723 GNA11P29992 359 aa23.39■■□□□ 1.33
RAB28-201ENST00000288723 SREBF1P36956 1147 aa23.39■■□□□ 1.33
RAB28-201ENST00000288723 GDF6Q6KF10 455 aaPredicted RBP23.39■■□□□ 1.33
RAB28-201ENST00000288723 REXO1Q8N1G1 1221 aaKnown RBP23.39■■□□□ 1.33
RAB28-201ENST00000288723 CDHR1Q96JP9 859 aa23.39■■□□□ 1.33
RAB28-201ENST00000288723 HAS3O00219 553 aa23.38■■□□□ 1.33
RAB28-201ENST00000288723 LARGE1O95461 756 aa23.38■■□□□ 1.33
RAB28-201ENST00000288723 ARP10275 920 aa23.38■■□□□ 1.33
RAB28-201ENST00000288723 ARHGAP4P98171 946 aa23.38■■□□□ 1.33
RAB28-201ENST00000288723 PTPN11Q06124 597 aaPredicted RBP23.38■■□□□ 1.33
RAB28-201ENST00000288723 PTGISQ16647 500 aa23.38■■□□□ 1.33
RAB28-201ENST00000288723 TMEM199Q8N511 208 aa23.38■■□□□ 1.33
RAB28-201ENST00000288723 C7orf31Q8N865 590 aa23.38■■□□□ 1.33
RAB28-201ENST00000288723 NECAB1Q8N987 351 aa23.38■■□□□ 1.33
RAB28-201ENST00000288723 CCDC148Q8NFR7 591 aa23.38■■□□□ 1.33
RAB28-201ENST00000288723 KATNAL1Q9BW62 490 aa23.38■■□□□ 1.33
RAB28-201ENST00000288723 KCNH7Q9NS40 1196 aa23.38■■□□□ 1.33
RAB28-201ENST00000288723 NOD1Q9Y239 953 aa23.38■■□□□ 1.33
RAB28-201ENST00000288723 DEXIO95424 95 aa23.38■■□□□ 1.33
RAB28-201ENST00000288723 LGALS2P05162 132 aa23.38■■□□□ 1.33
RAB28-201ENST00000288723 ACRP10323 421 aa23.38■■□□□ 1.33
RAB28-201ENST00000288723 NLRP5P59047 1200 aa23.38■■□□□ 1.33
RAB28-201ENST00000288723 LRIT3Q3SXY7 679 aa23.38■■□□□ 1.33
RAB28-201ENST00000288723 C16orf59Q7L2K0 433 aa23.38■■□□□ 1.33
RAB28-201ENST00000288723 WNT8AQ9H1J5 351 aa23.38■■□□□ 1.33
RAB28-201ENST00000288723 ZNF76P36508 570 aa23.37■■□□□ 1.33
RAB28-201ENST00000288723 ME3Q16798 604 aa23.37■■□□□ 1.33
RAB28-201ENST00000288723 CEP55Q53EZ4 464 aa23.37■■□□□ 1.33
RAB28-201ENST00000288723 UTP14CQ5TAP6 766 aaKnown RBP23.37■■□□□ 1.33
RAB28-201ENST00000288723 TRIM50Q86XT4 487 aa23.37■■□□□ 1.33
RAB28-201ENST00000288723 SCLYQ96I15 445 aa23.37■■□□□ 1.33
RAB28-201ENST00000288723 CTAGE1Q96RT6 745 aa23.37■■□□□ 1.33
RAB28-201ENST00000288723 SH3GLB2Q9NR46 395 aa23.37■■□□□ 1.33
RAB28-201ENST00000288723 H3BRB1 525 aa23.36■■□□□ 1.33
RAB28-201ENST00000288723 SESTD1Q86VW0 696 aa23.36■■□□□ 1.33
RAB28-201ENST00000288723 GIMAP8Q8ND71 665 aaPredicted RBP23.36■■□□□ 1.33
RAB28-201ENST00000288723 UIMC1Q96RL1 719 aa23.36■■□□□ 1.33
RAB28-201ENST00000288723 TUT1Q9H6E5 874 aaKnown RBP23.36■■□□□ 1.33
RAB28-201ENST00000288723 GTF2IRD1Q9UHL9 959 aa23.36■■□□□ 1.33
RAB28-201ENST00000288723 FAM86B1E9PN63 330 aa23.36■■□□□ 1.33
RAB28-201ENST00000288723 MAFGO15525 162 aa23.36■■□□□ 1.33
RAB28-201ENST00000288723 CTDNEP1O95476 244 aa23.36■■□□□ 1.33
RAB28-201ENST00000288723 FAM86B2P0C5J1 330 aa23.36■■□□□ 1.33
RAB28-201ENST00000288723 ZNF200P98182 395 aaPredicted RBP23.36■■□□□ 1.33
RAB28-201ENST00000288723 PPIGQ13427 754 aaKnown RBP eCLIP23.36■■□□□ 1.335e-9■■■□□ 16.3
RAB28-201ENST00000288723 HIC1Q14526 733 aa23.36■■□□□ 1.33
RAB28-201ENST00000288723 BICD2Q8TD16 824 aa23.36■■□□□ 1.33
RAB28-201ENST00000288723 CRYGNQ8WXF5 182 aa23.36■■□□□ 1.33
RAB28-201ENST00000288723 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.36■■□□□ 1.33
RAB28-201ENST00000288723 MEIS1O00470 390 aa23.35■■□□□ 1.33
RAB28-201ENST00000288723 CDKL5O76039 1030 aa23.34■■□□□ 1.33
RAB28-201ENST00000288723 TCF7P36402 384 aaPredicted RBP23.34■■□□□ 1.33
RAB28-201ENST00000288723 GSTTP1A0A1W2PQM5 241 aa23.33■■□□□ 1.33
RAB28-201ENST00000288723 ITGB3BPQ13352 177 aaPredicted RBP23.33■■□□□ 1.33
RAB28-201ENST00000288723 RNPC3Q96LT9 517 aaKnown RBP23.33■■□□□ 1.33
RAB28-201ENST00000288723 KIF2CQ99661 725 aa23.33■■□□□ 1.33
RAB28-201ENST00000288723 AGO4Q9HCK5 861 aaKnown RBP23.33■■□□□ 1.33
RAB28-201ENST00000288723 GJB4Q9NTQ9 266 aa23.33■■□□□ 1.33
RAB28-201ENST00000288723 KCNJ14Q9UNX9 436 aa23.33■■□□□ 1.33
RAB28-201ENST00000288723 RBAK-RBAKDNI3L0D1 243 aa23.33■■□□□ 1.32
RAB28-201ENST00000288723 SLC34A2O95436 690 aa23.33■■□□□ 1.32
RAB28-201ENST00000288723 CYP3A4P08684 503 aa23.33■■□□□ 1.32
RAB28-201ENST00000288723 TMEM240Q5SV17 173 aa23.33■■□□□ 1.32
RAB28-201ENST00000288723 MCTP2Q6DN12 878 aa23.33■■□□□ 1.32
RAB28-201ENST00000288723 ZNF365Q70YC5 407 aa23.33■■□□□ 1.32
RAB28-201ENST00000288723 PLA2G4DQ86XP0 818 aa23.33■■□□□ 1.32
RAB28-201ENST00000288723 SEPT1Q8WYJ6 367 aa23.33■■□□□ 1.32
RAB28-201ENST00000288723 C22orf23Q9BZE7 217 aa23.33■■□□□ 1.32
RAB28-201ENST00000288723 IL23AQ9NPF7 189 aa23.33■■□□□ 1.32
RAB28-201ENST00000288723 PCDHA4Q9UN74 947 aa23.33■■□□□ 1.32
RAB28-201ENST00000288723 DHX38Q92620 1227 aaKnown RBP23.32■■□□□ 1.32
RAB28-201ENST00000288723 GTF3C6Q969F1 213 aa23.32■■□□□ 1.32
RAB28-201ENST00000288723 JPH1Q9HDC5 661 aaPredicted RBP23.32■■□□□ 1.32
RAB28-201ENST00000288723 IGLV3-22A0A075B6J6 115 aa23.31■■□□□ 1.32
RAB28-201ENST00000288723 SMIM10L2AP0DMW4 78 aa23.31■■□□□ 1.32
RAB28-201ENST00000288723 SMIM10L2BP0DMW5 78 aa23.31■■□□□ 1.32
RAB28-201ENST00000288723 NPY5RQ15761 445 aa23.31■■□□□ 1.32
RAB28-201ENST00000288723 SDF4Q9BRK5 362 aa23.31■■□□□ 1.32
RAB28-201ENST00000288723 ORC3Q9UBD5 711 aaPredicted RBP23.31■■□□□ 1.32
RAB28-201ENST00000288723 SLC9A2Q9UBY0 812 aa23.31■■□□□ 1.32
RAB28-201ENST00000288723 DDX39AO00148 427 aaKnown RBP23.31■■□□□ 1.32
RAB28-201ENST00000288723 EDIL3O43854 480 aa23.31■■□□□ 1.32
RAB28-201ENST00000288723 DEFB128Q7Z7B8 93 aa23.31■■□□□ 1.32
RAB28-201ENST00000288723 BLIDQ8IZY5 108 aa23.31■■□□□ 1.32
RAB28-201ENST00000288723 RETREG2Q8NC44 543 aa23.31■■□□□ 1.32
RAB28-201ENST00000288723 WNT8BQ93098 351 aa23.31■■□□□ 1.32
RAB28-201ENST00000288723 VWCEQ96DN2 955 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms