RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 SLC10A4Q96EP9 437 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 PHACTR3Q96KR7 559 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 CEP170P1Q96L14 293 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 DDX50Q9BQ39 737 aaKnown RBP4.39□□□□□ -1.71
SCN3A-201ENST00000283254 XAB2Q9HCS7 855 aaKnown RBP4.39□□□□□ -1.71
SCN3A-201ENST00000283254 COPRSQ9NQ92 184 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.39□□□□□ -1.71
SCN3A-201ENST00000283254 ABCA5Q8WWZ7 1642 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 DENND3A2RUS2 1198 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 E9PMD0 336 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 MYO1DO94832 1006 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 BMP3P12645 472 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 SFSWAPQ12872 951 aaKnown RBP4.39□□□□□ -1.71
SCN3A-201ENST00000283254 RFX6Q8HWS3 928 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 PHKBQ93100 1093 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 ZNF653Q96CK0 615 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 PI4KBQ9UBF8 816 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 CDV3Q9UKY7 258 aaKnown RBP4.39□□□□□ -1.71
SCN3A-201ENST00000283254 PTCH1Q13635 1447 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 SYNJ2BP-COX16A0A087WUM0 186 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 ERVV-1B6SEH8 477 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 SERPINB2P05120 415 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 SERPINB6P35237 376 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 KCNJ6P48051 423 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 Q3C1V9 767 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 ZNF667Q5HYK9 610 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 TEDDM1Q5T9Z0 273 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 ATG16L1Q676U5 607 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 CLEC4GQ6UXB4 293 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 KRT27Q7Z3Y8 459 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 UBE2Q2Q8WVN8 375 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 CCDC138Q96M89 665 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 KLC2Q9H0B6 622 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 COX16Q9P0S2 106 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 MAPK8IP1Q9UQF2 711 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 MYOM2P54296 1465 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 ZNF608Q9ULD9 1512 aaPredicted RBP4.38□□□□□ -1.71
SCN3A-201ENST00000283254 LRRD1A4D1F6 860 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 MEIS1O00470 390 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 ZBED1O96006 694 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 APOEP02649 317 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 KRT1P04264 644 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 TFDP2Q14188 446 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 MYL10Q9BUA6 226 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 PARVGQ9HBI0 331 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 ATG3Q9NT62 314 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 TMEM94Q12767 1356 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 MIF4GDA9UHW6 222 aaKnown RBP4.38□□□□□ -1.71
SCN3A-201ENST00000283254 ZNF197O14709 1029 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 HUS1O60921 280 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 USP17L8P0C7I0 530 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 PFKFB1P16118 471 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 CASP2P42575 452 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 SCNN1DP51172 638 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 ANKS3Q6ZW76 656 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 IFNL3Q8IZI9 196 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 PAWRQ96IZ0 340 aaKnown RBP4.38□□□□□ -1.71
SCN3A-201ENST00000283254 ZNF560Q96MR9 790 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 MTA3Q9BTC8 594 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 TMEM106CQ9BVX2 250 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 APOL6Q9BWW8 343 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 TRIM54Q9BYV2 358 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 FOXP1Q9H334 677 aaPredicted RBP4.38□□□□□ -1.71
SCN3A-201ENST00000283254 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.38□□□□□ -1.71
SCN3A-201ENST00000283254 KDM5CP41229 1560 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 SPECC1L-ADORA2AF8WAN1 911 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 ZAP70P43403 619 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 KRT76Q01546 638 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 NOP9Q86U38 636 aaKnown RBP4.38□□□□□ -1.71
SCN3A-201ENST00000283254 TBC1D22BQ9NU19 505 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 GCNT4Q9P109 453 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 KIAA1468Q9P260 1216 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 NFU1Q9UMS0 254 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 PCDHB8Q9UN66 801 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 FAF1Q9UNN5 650 aaPredicted RBP4.38□□□□□ -1.71
SCN3A-201ENST00000283254 KIAA1024Q9UPX6 916 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 THRAP3Q9Y2W1 955 aaKnown RBP4.38□□□□□ -1.71
SCN3A-201ENST00000283254 PDE8BO95263 885 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 SFNP31947 248 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 RCAN1P53805 252 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 EIF3BP55884 814 aaKnown RBP4.38□□□□□ -1.71
SCN3A-201ENST00000283254 RNASE9P60153 205 aaKnown RBP4.38□□□□□ -1.71
SCN3A-201ENST00000283254 CHRNDQ07001 517 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 LAMB3Q13751 1172 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 KRBA2Q6ZNG9 492 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 FBXO41Q8TF61 875 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 TRIM35Q9UPQ4 493 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 DAAM1Q9Y4D1 1078 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 KDM5DQ9BY66 1539 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 ADCY9O60503 1353 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 ADAMTS12P58397 1594 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 AFPP02771 609 aaKnown RBP4.38□□□□□ -1.71
SCN3A-201ENST00000283254 MSH2P43246 934 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 ARHGDIAP52565 204 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 LRRC63Q05C16 580 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 MAPK8IP2Q13387 824 aaPredicted RBP4.38□□□□□ -1.71
SCN3A-201ENST00000283254 SPATA1Q5VX52 437 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 TMEM179Q6ZVK1 233 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 FRA10AC1Q70Z53 315 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 PODNQ7Z5L7 613 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms