RNA–Protein interactions for RNA: ENST00000279477.11

SIRPB1-202, Transcript of signal regulatory protein beta 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIRPB1, Length 2,207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1-202ENST00000279477 RBAK-RBAKDNI3L0D1 243 aa12.61□□□□□ -0.39
SIRPB1-202ENST00000279477 SERPING1P05155 500 aa12.61□□□□□ -0.39
SIRPB1-202ENST00000279477 PLA2G4BP0C869 781 aa12.61□□□□□ -0.39
SIRPB1-202ENST00000279477 EIF4A3P38919 411 aaKnown RBP12.61□□□□□ -0.39
SIRPB1-202ENST00000279477 EPS15P42566 896 aa12.61□□□□□ -0.39
SIRPB1-202ENST00000279477 TNNT3P45378 269 aaPredicted RBP12.61□□□□□ -0.39
SIRPB1-202ENST00000279477 TTBK2Q6IQ55 1244 aa12.61□□□□□ -0.39
SIRPB1-202ENST00000279477 KCTD1Q719H9 257 aa12.61□□□□□ -0.39
SIRPB1-202ENST00000279477 RRAGAQ7L523 313 aa12.61□□□□□ -0.39
SIRPB1-202ENST00000279477 KCNK18Q7Z418 384 aa12.61□□□□□ -0.39
SIRPB1-202ENST00000279477 ZC3H3Q8IXZ2 948 aaKnown RBP12.61□□□□□ -0.39
SIRPB1-202ENST00000279477 GMCL1P1Q8NEA9 526 aa12.61□□□□□ -0.39
SIRPB1-202ENST00000279477 FLAD1Q8NFF5 587 aa12.61□□□□□ -0.39
SIRPB1-202ENST00000279477 BAP1Q92560 729 aa12.61□□□□□ -0.39
SIRPB1-202ENST00000279477 MMS19Q96T76 1030 aa12.61□□□□□ -0.39
SIRPB1-202ENST00000279477 RASSF4Q9H2L5 321 aa12.61□□□□□ -0.39
SIRPB1-202ENST00000279477 RNF14Q9UBS8 474 aa12.61□□□□□ -0.39
SIRPB1-202ENST00000279477 FRMD3A2A2Y4 597 aa12.6□□□□□ -0.39
SIRPB1-202ENST00000279477 CERKLQ49MI3 558 aaPredicted RBP12.6□□□□□ -0.39
SIRPB1-202ENST00000279477 SFMBT2Q5VUG0 894 aa12.6□□□□□ -0.39
SIRPB1-202ENST00000279477 SLFN13Q68D06 897 aa12.6□□□□□ -0.39
SIRPB1-202ENST00000279477 GPBP1Q86WP2 473 aa12.6□□□□□ -0.39
SIRPB1-202ENST00000279477 CLEC10AQ8IUN9 316 aa12.6□□□□□ -0.39
SIRPB1-202ENST00000279477 MMGT1Q8N4V1 131 aa12.6□□□□□ -0.39
SIRPB1-202ENST00000279477 EEF2KMTQ96G04 330 aa12.6□□□□□ -0.39
SIRPB1-202ENST00000279477 FAM20AQ96MK3 541 aa12.6□□□□□ -0.39
SIRPB1-202ENST00000279477 NUDT12Q9BQG2 462 aa12.6□□□□□ -0.39
SIRPB1-202ENST00000279477 AMNQ9BXJ7 453 aa12.6□□□□□ -0.39
SIRPB1-202ENST00000279477 PDE11AQ9HCR9 933 aa12.6□□□□□ -0.39
SIRPB1-202ENST00000279477 HDAC6Q9UBN7 1215 aa12.6□□□□□ -0.39
SIRPB1-202ENST00000279477 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.6□□□□□ -0.39
SIRPB1-202ENST00000279477 RCCD1A6NED2 376 aa12.6□□□□□ -0.39
SIRPB1-202ENST00000279477 SSBP05455 408 aaKnown RBP eCLIP12.6□□□□□ -0.39
SIRPB1-202ENST00000279477 KRT18P05783 430 aaKnown RBP12.6□□□□□ -0.39
SIRPB1-202ENST00000279477 SLC16A2P36021 539 aa12.6□□□□□ -0.39
SIRPB1-202ENST00000279477 MAGEA1P43355 309 aa12.6□□□□□ -0.39
SIRPB1-202ENST00000279477 AARSP49588 968 aaKnown RBP eCLIP12.6□□□□□ -0.39
SIRPB1-202ENST00000279477 SCNN1DP51172 638 aa12.6□□□□□ -0.39
SIRPB1-202ENST00000279477 HNRNPH2P55795 449 aaKnown RBP12.6□□□□□ -0.39
SIRPB1-202ENST00000279477 CYP27A1Q02318 531 aa12.6□□□□□ -0.39
SIRPB1-202ENST00000279477 RAD51AP2Q09MP3 1159 aa12.6□□□□□ -0.39
SIRPB1-202ENST00000279477 Q4G0T1 1027 aa12.6□□□□□ -0.39
SIRPB1-202ENST00000279477 STRIP1Q5VSL9 837 aa12.6□□□□□ -0.39
SIRPB1-202ENST00000279477 GMCL1Q96IK5 515 aa12.6□□□□□ -0.39
SIRPB1-202ENST00000279477 NOX5Q96PH1 765 aa12.6□□□□□ -0.39
SIRPB1-202ENST00000279477 MXD3Q9BW11 206 aa12.6□□□□□ -0.39
SIRPB1-202ENST00000279477 KIAA1024Q9UPX6 916 aa12.6□□□□□ -0.39
SIRPB1-202ENST00000279477 ZNF646O15015 1829 aaPredicted RBP12.59□□□□□ -0.39
SIRPB1-202ENST00000279477 H3BQF6 201 aa12.59□□□□□ -0.39
SIRPB1-202ENST00000279477 CETN3O15182 167 aa12.59□□□□□ -0.39
SIRPB1-202ENST00000279477 PAFAH1B1P43034 410 aa12.59□□□□□ -0.39
SIRPB1-202ENST00000279477 ICA1Q05084 483 aa12.59□□□□□ -0.39
SIRPB1-202ENST00000279477 TDRD12Q587J7 1177 aaKnown RBP12.59□□□□□ -0.39
SIRPB1-202ENST00000279477 CCDC181Q5TID7 509 aa12.59□□□□□ -0.39
SIRPB1-202ENST00000279477 TRIM59Q8IWR1 403 aa12.59□□□□□ -0.39
SIRPB1-202ENST00000279477 CAPZA3Q96KX2 299 aa12.59□□□□□ -0.39
SIRPB1-202ENST00000279477 YY1AP1Q9H869 796 aa12.59□□□□□ -0.39
SIRPB1-202ENST00000279477 ATP8B3O60423 1300 aa12.59□□□□□ -0.39
SIRPB1-202ENST00000279477 BRWD3Q6RI45 1802 aa12.59□□□□□ -0.39
SIRPB1-202ENST00000279477 SPDYE3A6NKU9 549 aa12.58□□□□□ -0.39
SIRPB1-202ENST00000279477 ZNF263O14978 683 aa12.58□□□□□ -0.39
SIRPB1-202ENST00000279477 IVLP07476 585 aa12.58□□□□□ -0.39
SIRPB1-202ENST00000279477 EEF2P13639 858 aaKnown RBP12.58□□□□□ -0.39
SIRPB1-202ENST00000279477 CYP11B2P19099 503 aa12.58□□□□□ -0.39
SIRPB1-202ENST00000279477 ANXA13P27216 316 aa12.58□□□□□ -0.39
SIRPB1-202ENST00000279477 HSPA1LP34931 641 aa12.58□□□□□ -0.39
SIRPB1-202ENST00000279477 ARHGAP4P98171 946 aa12.58□□□□□ -0.39
SIRPB1-202ENST00000279477 HERC4Q5GLZ8 1057 aaPredicted RBP12.58□□□□□ -0.39
SIRPB1-202ENST00000279477 TATDN1Q6P1N9 297 aa12.58□□□□□ -0.39
SIRPB1-202ENST00000279477 FBXO11Q86XK2 927 aa12.58□□□□□ -0.39
SIRPB1-202ENST00000279477 GOLGA5Q8TBA6 731 aa12.58□□□□□ -0.39
SIRPB1-202ENST00000279477 CCDC102AQ96A19 550 aa12.58□□□□□ -0.39
SIRPB1-202ENST00000279477 EMILIN3Q9NT22 766 aa12.58□□□□□ -0.39
SIRPB1-202ENST00000279477 FEZ2Q9UHY8 353 aaPredicted RBP12.58□□□□□ -0.39
SIRPB1-202ENST00000279477 ADAM21Q9UKJ8 722 aa12.58□□□□□ -0.39
SIRPB1-202ENST00000279477 EPHB6O15197 1021 aa12.58□□□□□ -0.4
SIRPB1-202ENST00000279477 RPA1P27694 616 aa12.58□□□□□ -0.4
SIRPB1-202ENST00000279477 SREBF1P36956 1147 aa12.58□□□□□ -0.4
SIRPB1-202ENST00000279477 ECM1Q16610 540 aa12.58□□□□□ -0.4
SIRPB1-202ENST00000279477 DOK7Q18PE1 504 aa12.58□□□□□ -0.4
SIRPB1-202ENST00000279477 ASTE1Q2TB18 679 aaPredicted RBP12.58□□□□□ -0.4
SIRPB1-202ENST00000279477 C10orf76Q5T2E6 689 aa12.58□□□□□ -0.4
SIRPB1-202ENST00000279477 SERPINA10Q9UK55 444 aa12.58□□□□□ -0.4
SIRPB1-202ENST00000279477 DNM3Q9UQ16 869 aa12.58□□□□□ -0.4
SIRPB1-202ENST00000279477 PCDHA2Q9Y5H9 948 aa12.58□□□□□ -0.4
SIRPB1-202ENST00000279477 ATRNL1Q5VV63 1379 aa12.58□□□□□ -0.4
SIRPB1-202ENST00000279477 LOXHD1Q8IVV2 1947 aa12.57□□□□□ -0.4
SIRPB1-202ENST00000279477 POTEB3A0JP26 581 aa12.57□□□□□ -0.4
SIRPB1-202ENST00000279477 POTECB2RU33 542 aa12.57□□□□□ -0.4
SIRPB1-202ENST00000279477 CALUO43852 315 aaPredicted RBP12.57□□□□□ -0.4
SIRPB1-202ENST00000279477 PLEKP08567 350 aaPredicted RBP12.57□□□□□ -0.4
SIRPB1-202ENST00000279477 MMP14P50281 582 aa12.57□□□□□ -0.4
SIRPB1-202ENST00000279477 SLC12A3P55017 1021 aa12.57□□□□□ -0.4
SIRPB1-202ENST00000279477 LRRC41Q15345 812 aa12.57□□□□□ -0.4
SIRPB1-202ENST00000279477 GLE1Q53GS7 698 aaKnown RBP12.57□□□□□ -0.4
SIRPB1-202ENST00000279477 FAM83BQ5T0W9 1011 aa12.57□□□□□ -0.4
SIRPB1-202ENST00000279477 POTEBQ6S5H4 581 aa12.57□□□□□ -0.4
SIRPB1-202ENST00000279477 KRT27Q7Z3Y8 459 aa12.57□□□□□ -0.4
SIRPB1-202ENST00000279477 FRMD5Q7Z6J6 570 aa12.57□□□□□ -0.4
SIRPB1-202ENST00000279477 ETNPPLQ8TBG4 499 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms