RNA–Protein interactions for RNA: ENST00000278916.7

CHEK1-201, Transcript of checkpoint kinase 1, humanhuman

TSL 5 BASIC

Gene CHEK1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-201ENST00000278916 NECAB2Q7Z6G3 386 aa13.4□□□□□ -0.26
CHEK1-201ENST00000278916 NEK8Q86SG6 692 aa13.4□□□□□ -0.26
CHEK1-201ENST00000278916 FERMT3Q86UX7 667 aa13.4□□□□□ -0.26
CHEK1-201ENST00000278916 TEX2Q8IWB9 1127 aa13.4□□□□□ -0.26
CHEK1-201ENST00000278916 FAM177A1Q8N128 213 aaPredicted RBP13.4□□□□□ -0.26
CHEK1-201ENST00000278916 NKRFO15226 690 aaKnown RBP eCLIP13.39□□□□□ -0.27
CHEK1-201ENST00000278916 TGFB3P10600 412 aa13.39□□□□□ -0.27
CHEK1-201ENST00000278916 COL6A1P12109 1028 aa13.39□□□□□ -0.27
CHEK1-201ENST00000278916 FOXD4L5Q5VV16 416 aaPredicted RBP13.39□□□□□ -0.27
CHEK1-201ENST00000278916 MCTP2Q6DN12 878 aa13.39□□□□□ -0.27
CHEK1-201ENST00000278916 KCNV1Q6PIU1 500 aa13.39□□□□□ -0.27
CHEK1-201ENST00000278916 TRIM50Q86XT4 487 aa13.39□□□□□ -0.27
CHEK1-201ENST00000278916 ANKLE1Q8NAG6 615 aa13.39□□□□□ -0.27
CHEK1-201ENST00000278916 FOXD4L4Q8WXT5 416 aaPredicted RBP13.39□□□□□ -0.27
CHEK1-201ENST00000278916 ZNF577Q9BSK1 485 aa13.39□□□□□ -0.27
CHEK1-201ENST00000278916 KIF3AQ9Y496 699 aa13.39□□□□□ -0.27
CHEK1-201ENST00000278916 A6NJR5 290 aa13.39□□□□□ -0.27
CHEK1-201ENST00000278916 IPO5O00410 1097 aaKnown RBP13.39□□□□□ -0.27
CHEK1-201ENST00000278916 NOP56O00567 594 aaKnown RBP13.39□□□□□ -0.27
CHEK1-201ENST00000278916 MSH4O15457 936 aa13.39□□□□□ -0.27
CHEK1-201ENST00000278916 CST5P28325 142 aaPredicted RBP13.39□□□□□ -0.27
CHEK1-201ENST00000278916 CIITAP33076 1130 aa13.39□□□□□ -0.27
CHEK1-201ENST00000278916 CPT1AP50416 773 aa13.39□□□□□ -0.27
CHEK1-201ENST00000278916 USP11P51784 963 aa13.39□□□□□ -0.27
CHEK1-201ENST00000278916 LAMC2Q13753 1193 aa13.39□□□□□ -0.27
CHEK1-201ENST00000278916 NEDD9Q14511 834 aa13.39□□□□□ -0.27
CHEK1-201ENST00000278916 LRRC26Q2I0M4 334 aa13.39□□□□□ -0.27
CHEK1-201ENST00000278916 NOSTRINQ8IVI9 506 aa13.39□□□□□ -0.27
CHEK1-201ENST00000278916 DDX25Q9UHL0 483 aaKnown RBP13.39□□□□□ -0.27
CHEK1-201ENST00000278916 PHF24Q9UPV7 400 aa13.39□□□□□ -0.27
CHEK1-201ENST00000278916 Q9Y3F1 56 aa13.39□□□□□ -0.27
CHEK1-201ENST00000278916 RANBP2P49792 3224 aaKnown RBP13.38□□□□□ -0.27
CHEK1-201ENST00000278916 CHMP2AO43633 222 aa13.38□□□□□ -0.27
CHEK1-201ENST00000278916 SYT1P21579 422 aa13.38□□□□□ -0.27
CHEK1-201ENST00000278916 DDIT3P35638 169 aa13.38□□□□□ -0.27
CHEK1-201ENST00000278916 PURAQ00577 322 aaKnown RBP13.38□□□□□ -0.27
CHEK1-201ENST00000278916 UTP14CQ5TAP6 766 aaKnown RBP13.38□□□□□ -0.27
CHEK1-201ENST00000278916 METTL7BQ6UX53 244 aa13.38□□□□□ -0.27
CHEK1-201ENST00000278916 PCSK9Q8NBP7 692 aaKnown RBP13.38□□□□□ -0.27
CHEK1-201ENST00000278916 PPTC7Q8NI37 304 aa13.38□□□□□ -0.27
CHEK1-201ENST00000278916 INTS4Q96HW7 963 aaKnown RBP13.38□□□□□ -0.27
CHEK1-201ENST00000278916 CDHR1Q96JP9 859 aa13.38□□□□□ -0.27
CHEK1-201ENST00000278916 GPR20Q99678 358 aa13.38□□□□□ -0.27
CHEK1-201ENST00000278916 SENP7Q9BQF6 1050 aa13.38□□□□□ -0.27
CHEK1-201ENST00000278916 FOXP1Q9H334 677 aaPredicted RBP13.38□□□□□ -0.27
CHEK1-201ENST00000278916 JPH1Q9HDC5 661 aaPredicted RBP13.38□□□□□ -0.27
CHEK1-201ENST00000278916 STARD7Q9NQZ5 370 aa13.38□□□□□ -0.27
CHEK1-201ENST00000278916 ALPK3Q96L96 1907 aa13.37□□□□□ -0.27
CHEK1-201ENST00000278916 DHX15O43143 795 aaKnown RBP13.37□□□□□ -0.27
CHEK1-201ENST00000278916 CCNE2O96020 404 aa13.37□□□□□ -0.27
CHEK1-201ENST00000278916 MCM7P33993 719 aa13.37□□□□□ -0.27
CHEK1-201ENST00000278916 SETQ01105 290 aaPredicted RBP13.37□□□□□ -0.27
CHEK1-201ENST00000278916 EMID1Q96A84 441 aaPredicted RBP13.37□□□□□ -0.27
CHEK1-201ENST00000278916 GLT1D1Q96MS3 346 aa13.37□□□□□ -0.27
CHEK1-201ENST00000278916 SDF4Q9BRK5 362 aa13.37□□□□□ -0.27
CHEK1-201ENST00000278916 SLC9A2Q9UBY0 812 aa13.37□□□□□ -0.27
CHEK1-201ENST00000278916 GRIN2DO15399 1336 aa13.36□□□□□ -0.27
CHEK1-201ENST00000278916 MOXD2PA6NHM9 499 aa13.36□□□□□ -0.27
CHEK1-201ENST00000278916 U2AF2P26368 475 aaKnown RBP eCLIP13.36□□□□□ -0.271e-9■■□□□ 14.5
CHEK1-201ENST00000278916 NKX3-2P78367 333 aa13.36□□□□□ -0.27
CHEK1-201ENST00000278916 PKP1Q13835 747 aa13.36□□□□□ -0.27
CHEK1-201ENST00000278916 ZNF174Q15697 407 aa13.36□□□□□ -0.27
CHEK1-201ENST00000278916 DGKDQ16760 1214 aa13.36□□□□□ -0.27
CHEK1-201ENST00000278916 BRDTQ58F21 947 aaPredicted RBP13.36□□□□□ -0.27
CHEK1-201ENST00000278916 NIPA1Q7RTP0 329 aa13.36□□□□□ -0.27
CHEK1-201ENST00000278916 TRMT1LQ7Z2T5 733 aaKnown RBP13.36□□□□□ -0.27
CHEK1-201ENST00000278916 KAT2BQ92831 832 aa13.36□□□□□ -0.27
CHEK1-201ENST00000278916 TSEN34Q9BSV6 310 aaKnown RBP13.36□□□□□ -0.27
CHEK1-201ENST00000278916 ATP11BQ9Y2G3 1177 aa13.36□□□□□ -0.27
CHEK1-201ENST00000278916 CYP3A7-CYP3A51PA0A087WV96 503 aa13.36□□□□□ -0.27
CHEK1-201ENST00000278916 GSTTP1A0A1W2PQM5 241 aa13.36□□□□□ -0.27
CHEK1-201ENST00000278916 ZEB2O60315 1214 aa13.36□□□□□ -0.27
CHEK1-201ENST00000278916 PQBP1O60828 265 aaKnown RBP13.36□□□□□ -0.27
CHEK1-201ENST00000278916 LGALS2P05162 132 aa13.36□□□□□ -0.27
CHEK1-201ENST00000278916 CYP3A7P24462 503 aa13.36□□□□□ -0.27
CHEK1-201ENST00000278916 MARK3P27448 753 aa13.36□□□□□ -0.27
CHEK1-201ENST00000278916 TCF7P36402 384 aaPredicted RBP13.36□□□□□ -0.27
CHEK1-201ENST00000278916 TOB1P50616 345 aaPredicted RBP13.36□□□□□ -0.27
CHEK1-201ENST00000278916 ACTR2P61160 394 aa13.36□□□□□ -0.27
CHEK1-201ENST00000278916 TRIM60Q495X7 471 aa13.36□□□□□ -0.27
CHEK1-201ENST00000278916 Q4G0T1 1027 aa13.36□□□□□ -0.27
CHEK1-201ENST00000278916 LRCH2Q5VUJ6 765 aa13.36□□□□□ -0.27
CHEK1-201ENST00000278916 FAM173BQ6P4H8 233 aa13.36□□□□□ -0.27
CHEK1-201ENST00000278916 SLC39A5Q6ZMH5 540 aa13.36□□□□□ -0.27
CHEK1-201ENST00000278916 ETNPPLQ8TBG4 499 aa13.36□□□□□ -0.27
CHEK1-201ENST00000278916 DPF3Q92784 378 aa13.36□□□□□ -0.27
CHEK1-201ENST00000278916 MBOAT7Q96N66 472 aa13.36□□□□□ -0.27
CHEK1-201ENST00000278916 TMEM60Q9H2L4 133 aa13.36□□□□□ -0.27
CHEK1-201ENST00000278916 MAFGO15525 162 aa13.35□□□□□ -0.27
CHEK1-201ENST00000278916 RTP1P59025 263 aa13.35□□□□□ -0.27
CHEK1-201ENST00000278916 FAM47CQ5HY64 1035 aa13.35□□□□□ -0.27
CHEK1-201ENST00000278916 C7orf61Q8IZ16 206 aa13.35□□□□□ -0.27
CHEK1-201ENST00000278916 HAS1Q92839 578 aa13.35□□□□□ -0.27
CHEK1-201ENST00000278916 SLC5A5Q92911 643 aa13.35□□□□□ -0.27
CHEK1-201ENST00000278916 MTG1Q9BT17 334 aaPredicted RBP13.35□□□□□ -0.27
CHEK1-201ENST00000278916 POLR3EQ9NVU0 708 aa13.35□□□□□ -0.27
CHEK1-201ENST00000278916 PCDHB6Q9Y5E3 794 aa13.35□□□□□ -0.27
CHEK1-201ENST00000278916 MARCH6O60337 910 aa13.34□□□□□ -0.27
CHEK1-201ENST00000278916 NEMFO60524 1076 aa13.34□□□□□ -0.27
CHEK1-201ENST00000278916 GAS7O60861 476 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms