RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 PSMC4P43686 418 aa12.29□□□□□ -0.44
USP6NL-201ENST00000277575 LRRC63Q05C16 580 aa12.29□□□□□ -0.44
USP6NL-201ENST00000277575 GRM4Q14833 912 aa12.29□□□□□ -0.44
USP6NL-201ENST00000277575 ARHGEF6Q15052 776 aa12.29□□□□□ -0.44
USP6NL-201ENST00000277575 TRIM50Q86XT4 487 aa12.29□□□□□ -0.44
USP6NL-201ENST00000277575 CERKQ8TCT0 537 aa12.29□□□□□ -0.44
USP6NL-201ENST00000277575 HOXC10Q9NYD6 342 aa12.29□□□□□ -0.44
USP6NL-201ENST00000277575 PODXL2Q9NZ53 605 aa12.29□□□□□ -0.44
USP6NL-201ENST00000277575 ODF2LQ9ULJ1 636 aa12.29□□□□□ -0.44
USP6NL-201ENST00000277575 CD2APQ9Y5K6 639 aa12.29□□□□□ -0.44
USP6NL-201ENST00000277575 CALRP27797 417 aaKnown RBP12.29□□□□□ -0.44
USP6NL-201ENST00000277575 CHRNA5P30532 468 aa12.29□□□□□ -0.44
USP6NL-201ENST00000277575 ADCY8P40145 1251 aa12.29□□□□□ -0.44
USP6NL-201ENST00000277575 ZBED6P86452 979 aa12.29□□□□□ -0.44
USP6NL-201ENST00000277575 NAA35Q5VZE5 725 aa12.29□□□□□ -0.44
USP6NL-201ENST00000277575 SLC35F6Q8N357 371 aa12.29□□□□□ -0.44
USP6NL-201ENST00000277575 CRAMP1Q96RY5 1269 aa12.29□□□□□ -0.44
USP6NL-201ENST00000277575 NDST4Q9H3R1 872 aa12.29□□□□□ -0.44
USP6NL-201ENST00000277575 PNMA3Q9UL41 463 aa12.29□□□□□ -0.44
USP6NL-201ENST00000277575 GDAQ9Y2T3 454 aa12.29□□□□□ -0.44
USP6NL-201ENST00000277575 CPS1P31327 1500 aa12.29□□□□□ -0.44
USP6NL-201ENST00000277575 EFCAB8A8MWE9 144 aa12.29□□□□□ -0.44
USP6NL-201ENST00000277575 K7ERI5 159 aa12.29□□□□□ -0.44
USP6NL-201ENST00000277575 LPXNO60711 386 aa12.29□□□□□ -0.44
USP6NL-201ENST00000277575 HOXA7P31268 230 aaPredicted RBP12.29□□□□□ -0.44
USP6NL-201ENST00000277575 HSPA1LP34931 641 aa12.29□□□□□ -0.44
USP6NL-201ENST00000277575 ARHGAP4P98171 946 aa12.29□□□□□ -0.44
USP6NL-201ENST00000277575 IFRD2Q12894 506 aaPredicted RBP12.29□□□□□ -0.44
USP6NL-201ENST00000277575 C12orf60Q5U649 245 aa12.29□□□□□ -0.44
USP6NL-201ENST00000277575 HHATQ5VTY9 493 aa12.29□□□□□ -0.44
USP6NL-201ENST00000277575 ZNF579Q8NAF0 562 aaKnown RBP12.29□□□□□ -0.44
USP6NL-201ENST00000277575 PIGOQ8TEQ8 1089 aa12.29□□□□□ -0.44
USP6NL-201ENST00000277575 ANKRD36BP1Q96IX9 119 aa12.29□□□□□ -0.44
USP6NL-201ENST00000277575 THAP9Q9H5L6 903 aa12.29□□□□□ -0.44
USP6NL-201ENST00000277575 SPATA31A6Q5VVP1 1343 aa12.28□□□□□ -0.44
USP6NL-201ENST00000277575 QRICH1Q2TAL8 776 aa12.28□□□□□ -0.44
USP6NL-201ENST00000277575 DPH5Q9H2P9 285 aa12.28□□□□□ -0.44
USP6NL-201ENST00000277575 RAVER2Q9HCJ3 691 aaKnown RBP12.28□□□□□ -0.44
USP6NL-201ENST00000277575 GCNT4Q9P109 453 aa12.28□□□□□ -0.44
USP6NL-201ENST00000277575 SUGT1Q9Y2Z0 365 aa12.28□□□□□ -0.44
USP6NL-201ENST00000277575 CLTCQ00610 1675 aaKnown RBP12.28□□□□□ -0.44
USP6NL-201ENST00000277575 UBN2Q6ZU65 1347 aa12.28□□□□□ -0.44
USP6NL-201ENST00000277575 ABCD1P33897 745 aa12.28□□□□□ -0.44
USP6NL-201ENST00000277575 STOX1Q6ZVD7 989 aa12.28□□□□□ -0.44
USP6NL-201ENST00000277575 FBXO40Q9UH90 709 aa12.28□□□□□ -0.44
USP6NL-201ENST00000277575 CDC23Q9UJX2 597 aa12.28□□□□□ -0.44
USP6NL-201ENST00000277575 SFI1A8K8P3 1242 aa12.28□□□□□ -0.44
USP6NL-201ENST00000277575 ENC1O14682 589 aa12.28□□□□□ -0.44
USP6NL-201ENST00000277575 AKR1B1P15121 316 aa12.28□□□□□ -0.44
USP6NL-201ENST00000277575 DDIT3P35638 169 aa12.28□□□□□ -0.44
USP6NL-201ENST00000277575 SMC1BQ8NDV3 1235 aa12.28□□□□□ -0.44
USP6NL-201ENST00000277575 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.28□□□□□ -0.44
USP6NL-201ENST00000277575 NXF1Q9UBU9 619 aaKnown RBP12.28□□□□□ -0.44
USP6NL-201ENST00000277575 ZNF148Q9UQR1 794 aa12.28□□□□□ -0.44
USP6NL-201ENST00000277575 CTNNA1P35221 906 aaKnown RBP12.27□□□□□ -0.44
USP6NL-201ENST00000277575 PEX3P56589 373 aa12.27□□□□□ -0.44
USP6NL-201ENST00000277575 MTMR1Q13613 665 aa12.27□□□□□ -0.44
USP6NL-201ENST00000277575 VSTM4Q8IW00 320 aa12.27□□□□□ -0.44
USP6NL-201ENST00000277575 ABI1Q8IZP0 508 aa12.27□□□□□ -0.44
USP6NL-201ENST00000277575 FAM149B1Q96BN6 582 aa12.27□□□□□ -0.44
USP6NL-201ENST00000277575 PPP1R13BQ96KQ4 1090 aa12.27□□□□□ -0.44
USP6NL-201ENST00000277575 RABEP2Q9H5N1 569 aa12.27□□□□□ -0.44
USP6NL-201ENST00000277575 HAUS2Q9NVX0 235 aa12.27□□□□□ -0.44
USP6NL-201ENST00000277575 FEM1BQ9UK73 627 aa12.27□□□□□ -0.44
USP6NL-201ENST00000277575 SRGAP2CP0DJJ0 459 aa12.27□□□□□ -0.45
USP6NL-201ENST00000277575 ITPK1Q13572 414 aa12.27□□□□□ -0.45
USP6NL-201ENST00000277575 CUL4BQ13620 913 aa12.27□□□□□ -0.45
USP6NL-201ENST00000277575 FYB2Q5VWT5 728 aa12.27□□□□□ -0.45
USP6NL-201ENST00000277575 SNRNP48Q6IEG0 339 aaKnown RBP12.27□□□□□ -0.45
USP6NL-201ENST00000277575 FAM133AQ8N9E0 248 aa12.27□□□□□ -0.45
USP6NL-201ENST00000277575 PRPF38AQ8NAV1 312 aaKnown RBP12.27□□□□□ -0.45
USP6NL-201ENST00000277575 GRK7Q8WTQ7 553 aa12.27□□□□□ -0.45
USP6NL-201ENST00000277575 ZNF653Q96CK0 615 aa12.27□□□□□ -0.45
USP6NL-201ENST00000277575 FAM20AQ96MK3 541 aa12.27□□□□□ -0.45
USP6NL-201ENST00000277575 BARHL2Q9NY43 387 aa12.27□□□□□ -0.45
USP6NL-201ENST00000277575 GFPT2O94808 682 aa12.27□□□□□ -0.45
USP6NL-201ENST00000277575 CASP1P29466 404 aa12.27□□□□□ -0.45
USP6NL-201ENST00000277575 OSTNP61366 133 aa12.27□□□□□ -0.45
USP6NL-201ENST00000277575 GABPAQ06546 454 aa12.27□□□□□ -0.45
USP6NL-201ENST00000277575 UNC13DQ70J99 1090 aa12.27□□□□□ -0.45
USP6NL-201ENST00000277575 B4GALNT4Q76KP1 1039 aa12.27□□□□□ -0.45
USP6NL-201ENST00000277575 LINC00116Q8NCU8 138 aa12.27□□□□□ -0.45
USP6NL-201ENST00000277575 HAUS1Q96CS2 278 aa12.27□□□□□ -0.45
USP6NL-201ENST00000277575 RNF146Q9NTX7 359 aa12.27□□□□□ -0.45
USP6NL-201ENST00000277575 HERC5Q9UII4 1024 aaKnown RBP12.27□□□□□ -0.45
USP6NL-201ENST00000277575 MYO3AQ8NEV4 1616 aa12.27□□□□□ -0.45
USP6NL-201ENST00000277575 NEXMIFQ5QGS0 1516 aa12.27□□□□□ -0.45
USP6NL-201ENST00000277575 GIPC1O14908 333 aa12.27□□□□□ -0.45
USP6NL-201ENST00000277575 RGS16O15492 202 aaPredicted RBP12.27□□□□□ -0.45
USP6NL-201ENST00000277575 THAP12O43422 761 aa12.27□□□□□ -0.45
USP6NL-201ENST00000277575 SARNPP82979 210 aaKnown RBP12.27□□□□□ -0.45
USP6NL-201ENST00000277575 BFSP1Q12934 665 aa12.27□□□□□ -0.45
USP6NL-201ENST00000277575 ALCAMQ13740 583 aa12.27□□□□□ -0.45
USP6NL-201ENST00000277575 PPP4R3CPQ6ZMV5 832 aa12.27□□□□□ -0.45
USP6NL-201ENST00000277575 PALM2Q8IXS6 379 aa12.27□□□□□ -0.45
USP6NL-201ENST00000277575 CCDC110Q8TBZ0 833 aa12.27□□□□□ -0.45
USP6NL-201ENST00000277575 NLRP7Q8WX94 980 aa12.27□□□□□ -0.45
USP6NL-201ENST00000277575 CCT6BQ92526 530 aa12.27□□□□□ -0.45
USP6NL-201ENST00000277575 FAM81BQ96LP2 452 aa12.27□□□□□ -0.45
USP6NL-201ENST00000277575 AGLP35573 1532 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms