RNA–Protein interactions for RNA: ENST00000274065.8

RPS3A-201, Transcript of ribosomal protein S3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS3A, Length 934 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-201ENST00000274065 VPS13AQ96RL7 3174 aa9.9□□□□□ -0.82
RPS3A-201ENST00000274065 MYO7AQ13402 2215 aa9.9□□□□□ -0.82
RPS3A-201ENST00000274065 LCTP09848 1927 aa9.9□□□□□ -0.82
RPS3A-201ENST00000274065 TMEM221A6NGB7 291 aa9.9□□□□□ -0.82
RPS3A-201ENST00000274065 GSG1L2A8MUP6 293 aa9.9□□□□□ -0.82
RPS3A-201ENST00000274065 H3BNC9 293 aa9.9□□□□□ -0.82
RPS3A-201ENST00000274065 M0R296 226 aa9.9□□□□□ -0.82
RPS3A-201ENST00000274065 NFIBO00712 420 aa9.9□□□□□ -0.82
RPS3A-201ENST00000274065 KPNA6O60684 536 aa9.9□□□□□ -0.82
RPS3A-201ENST00000274065 ARIH2O95376 493 aa9.9□□□□□ -0.82
RPS3A-201ENST00000274065 MCCP23508 829 aa9.9□□□□□ -0.82
RPS3A-201ENST00000274065 HTRA4P83105 476 aaPredicted RBP9.9□□□□□ -0.82
RPS3A-201ENST00000274065 RBL2Q08999 1139 aa9.9□□□□□ -0.82
RPS3A-201ENST00000274065 GPM6BQ13491 265 aa9.9□□□□□ -0.82
RPS3A-201ENST00000274065 IKBKEQ14164 716 aa9.9□□□□□ -0.82
RPS3A-201ENST00000274065 BRDTQ58F21 947 aaPredicted RBP9.9□□□□□ -0.82
RPS3A-201ENST00000274065 KCTD1Q719H9 257 aa9.9□□□□□ -0.82
RPS3A-201ENST00000274065 FAM160B2Q86V87 743 aa9.9□□□□□ -0.82
RPS3A-201ENST00000274065 CHURC1Q8WUH1 139 aa9.9□□□□□ -0.82
RPS3A-201ENST00000274065 STRBPQ96SI9 672 aaKnown RBP9.9□□□□□ -0.82
RPS3A-201ENST00000274065 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.9□□□□□ -0.82
RPS3A-201ENST00000274065 NSUN3Q9H649 340 aaKnown RBP9.9□□□□□ -0.82
RPS3A-201ENST00000274065 CCPG1Q9ULG6 757 aa9.9□□□□□ -0.82
RPS3A-201ENST00000274065 PRR12Q9ULL5 1215 aa9.9□□□□□ -0.82
RPS3A-201ENST00000274065 SYNPO2Q9UMS6 1093 aa9.9□□□□□ -0.82
RPS3A-201ENST00000274065 TRIP12Q14669 1992 aaPredicted RBP9.9□□□□□ -0.83
RPS3A-201ENST00000274065 RAD50Q92878 1312 aa9.89□□□□□ -0.83
RPS3A-201ENST00000274065 NKRFO15226 690 aaKnown RBP eCLIP9.89□□□□□ -0.83
RPS3A-201ENST00000274065 MBTPS2O43462 519 aa9.89□□□□□ -0.83
RPS3A-201ENST00000274065 EFCAB14O75071 495 aa9.89□□□□□ -0.83
RPS3A-201ENST00000274065 DXOO77932 396 aaKnown RBP9.89□□□□□ -0.83
RPS3A-201ENST00000274065 PARNO95453 639 aaKnown RBP9.89□□□□□ -0.83
RPS3A-201ENST00000274065 RLBP1P12271 317 aa9.89□□□□□ -0.83
RPS3A-201ENST00000274065 SLC1A4P43007 532 aa9.89□□□□□ -0.83
RPS3A-201ENST00000274065 CTC1Q2NKJ3 1217 aa9.89□□□□□ -0.83
RPS3A-201ENST00000274065 SLC30A10Q6XR72 485 aa9.89□□□□□ -0.83
RPS3A-201ENST00000274065 SESTD1Q86VW0 696 aa9.89□□□□□ -0.83
RPS3A-201ENST00000274065 MYOCDQ8IZQ8 938 aa9.89□□□□□ -0.83
RPS3A-201ENST00000274065 ZNF444Q8N0Y2 327 aaPredicted RBP9.89□□□□□ -0.83
RPS3A-201ENST00000274065 CRIPAKQ8N1N5 446 aa9.89□□□□□ -0.83
RPS3A-201ENST00000274065 CLASRPQ8N2M8 674 aaKnown RBP9.89□□□□□ -0.83
RPS3A-201ENST00000274065 KAT2BQ92831 832 aa9.89□□□□□ -0.83
RPS3A-201ENST00000274065 WNT8BQ93098 351 aa9.89□□□□□ -0.83
RPS3A-201ENST00000274065 GMCL1Q96IK5 515 aa9.89□□□□□ -0.83
RPS3A-201ENST00000274065 EPB41L4AQ9HCS5 686 aaPredicted RBP9.89□□□□□ -0.83
RPS3A-201ENST00000274065 GPCPD1Q9NPB8 672 aa9.89□□□□□ -0.83
RPS3A-201ENST00000274065 ADD3Q9UEY8 706 aaKnown RBP9.89□□□□□ -0.83
RPS3A-201ENST00000274065 PTPDC1A2A3K4 754 aa9.88□□□□□ -0.83
RPS3A-201ENST00000274065 HOXA2O43364 376 aa9.88□□□□□ -0.83
RPS3A-201ENST00000274065 PLA2G6O60733 806 aa9.88□□□□□ -0.83
RPS3A-201ENST00000274065 ICAM1P05362 532 aa9.88□□□□□ -0.83
RPS3A-201ENST00000274065 IFIT2P09913 472 aaKnown RBP9.88□□□□□ -0.83
RPS3A-201ENST00000274065 TXNP10599 105 aaKnown RBP9.88□□□□□ -0.83
RPS3A-201ENST00000274065 ATP5JP18859 108 aa9.88□□□□□ -0.83
RPS3A-201ENST00000274065 CLCN1P35523 988 aa9.88□□□□□ -0.83
RPS3A-201ENST00000274065 VCPP55072 806 aaKnown RBP9.88□□□□□ -0.83
RPS3A-201ENST00000274065 HYAL1Q12794 435 aa9.88□□□□□ -0.83
RPS3A-201ENST00000274065 TRIM71Q2Q1W2 868 aaKnown RBP9.88□□□□□ -0.83
RPS3A-201ENST00000274065 ZNF618Q5T7W0 954 aa9.88□□□□□ -0.83
RPS3A-201ENST00000274065 ZKSCAN2Q63HK3 967 aa9.88□□□□□ -0.83
RPS3A-201ENST00000274065 ITPRIPQ8IWB1 547 aa9.88□□□□□ -0.83
RPS3A-201ENST00000274065 SUGP1Q8IWZ8 645 aaKnown RBP9.88□□□□□ -0.83
RPS3A-201ENST00000274065 TMEM192Q8IY95 271 aa9.88□□□□□ -0.83
RPS3A-201ENST00000274065 FBXL6Q8N531 539 aa9.88□□□□□ -0.83
RPS3A-201ENST00000274065 DBF4BQ8NFT6 615 aa9.88□□□□□ -0.83
RPS3A-201ENST00000274065 NEDD1Q8NHV4 660 aa9.88□□□□□ -0.83
RPS3A-201ENST00000274065 SCFD2Q8WU76 684 aa9.88□□□□□ -0.83
RPS3A-201ENST00000274065 AFG1LQ8WV93 481 aa9.88□□□□□ -0.83
RPS3A-201ENST00000274065 SAMD11Q96NU1 681 aa9.88□□□□□ -0.83
RPS3A-201ENST00000274065 POP1Q99575 1024 aaKnown RBP9.88□□□□□ -0.83
RPS3A-201ENST00000274065 PRRX2Q99811 253 aa9.88□□□□□ -0.83
RPS3A-201ENST00000274065 HAUS7Q99871 368 aa9.88□□□□□ -0.83
RPS3A-201ENST00000274065 USB1Q9BQ65 265 aaKnown RBP9.88□□□□□ -0.83
RPS3A-201ENST00000274065 AAASQ9NRG9 546 aa9.88□□□□□ -0.83
RPS3A-201ENST00000274065 FAM217BQ9NTX9 383 aaPredicted RBP9.88□□□□□ -0.83
RPS3A-201ENST00000274065 RIF1Q5UIP0 2472 aaKnown RBP9.88□□□□□ -0.83
RPS3A-201ENST00000274065 PLIN4Q96Q06 1357 aa9.88□□□□□ -0.83
RPS3A-201ENST00000274065 MYH4Q9Y623 1939 aa9.88□□□□□ -0.83
RPS3A-201ENST00000274065 LOC102724159A0A0B4J2E5 919 aa9.87□□□□□ -0.83
RPS3A-201ENST00000274065 STXBP3O00186 592 aa9.87□□□□□ -0.83
RPS3A-201ENST00000274065 TBX10O75333 385 aa9.87□□□□□ -0.83
RPS3A-201ENST00000274065 LGR5O75473 907 aa9.87□□□□□ -0.83
RPS3A-201ENST00000274065 AVPP01185 164 aa9.87□□□□□ -0.83
RPS3A-201ENST00000274065 MMP3P08254 477 aa9.87□□□□□ -0.83
RPS3A-201ENST00000274065 EDNRBP24530 442 aa9.87□□□□□ -0.83
RPS3A-201ENST00000274065 CALML3P27482 149 aa9.87□□□□□ -0.83
RPS3A-201ENST00000274065 GTF2F1P35269 517 aaKnown RBP eCLIP9.87□□□□□ -0.83
RPS3A-201ENST00000274065 ZNF200P98182 395 aaPredicted RBP9.87□□□□□ -0.83
RPS3A-201ENST00000274065 PDE4BQ07343 736 aa9.87□□□□□ -0.83
RPS3A-201ENST00000274065 PDE4DQ08499 809 aa9.87□□□□□ -0.83
RPS3A-201ENST00000274065 SMAD4Q13485 552 aaKnown RBP9.87□□□□□ -0.83
RPS3A-201ENST00000274065 PWP2Q15269 919 aaKnown RBP9.87□□□□□ -0.83
RPS3A-201ENST00000274065 HSP90AB4PQ58FF6 505 aa9.87□□□□□ -0.83
RPS3A-201ENST00000274065 GIMAP6Q6P9H5 292 aa9.87□□□□□ -0.83
RPS3A-201ENST00000274065 FBXO11Q86XK2 927 aa9.87□□□□□ -0.83
RPS3A-201ENST00000274065 ATOH1Q92858 354 aaPredicted RBP9.87□□□□□ -0.83
RPS3A-201ENST00000274065 KIF1BPQ96EK5 621 aa9.87□□□□□ -0.83
RPS3A-201ENST00000274065 HDAC6Q9UBN7 1215 aa9.87□□□□□ -0.83
RPS3A-201ENST00000274065 GTF2IRD1Q9UHL9 959 aa9.87□□□□□ -0.83
RPS3A-201ENST00000274065 LINC01565O15544 149 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms