RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 TRIM13O60858 407 aa16.96■□□□□ 0.31
UBR3-201ENST00000272793 SNX29Q8TEQ0 813 aa16.96■□□□□ 0.31
UBR3-201ENST00000272793 SPATA2Q9UM82 520 aa16.96■□□□□ 0.31
UBR3-201ENST00000272793 MOCS3O95396 460 aa16.96■□□□□ 0.31
UBR3-201ENST00000272793 TADA2BQ86TJ2 420 aa16.96■□□□□ 0.31
UBR3-201ENST00000272793 SBNO1A3KN83 1393 aa16.96■□□□□ 0.31
UBR3-201ENST00000272793 ARF4P18085 180 aaPredicted RBP16.96■□□□□ 0.31
UBR3-201ENST00000272793 RUNDC3BQ96NL0 473 aa16.96■□□□□ 0.31
UBR3-201ENST00000272793 GTSE1Q9NYZ3 720 aa16.96■□□□□ 0.31
UBR3-201ENST00000272793 CAMSAP2Q08AD1 1489 aa16.96■□□□□ 0.31
UBR3-201ENST00000272793 RFX8Q6ZV50 586 aa16.96■□□□□ 0.31
UBR3-201ENST00000272793 PSMC6P62333 389 aa16.96■□□□□ 0.31
UBR3-201ENST00000272793 CNGA3Q16281 694 aa16.96■□□□□ 0.31
UBR3-201ENST00000272793 FRMD6Q96NE9 622 aa16.96■□□□□ 0.31
UBR3-201ENST00000272793 NLRP3Q96P20 1036 aa16.96■□□□□ 0.31
UBR3-201ENST00000272793 FTOQ9C0B1 505 aaKnown RBP eCLIP16.96■□□□□ 0.31
UBR3-201ENST00000272793 PPARGC1AQ9UBK2 798 aaKnown RBP16.96■□□□□ 0.31
UBR3-201ENST00000272793 ABCC11Q96J66 1382 aa16.96■□□□□ 0.31
UBR3-201ENST00000272793 ARHGEF16Q5VV41 709 aa16.96■□□□□ 0.3
UBR3-201ENST00000272793 OTUD7BQ6GQQ9 843 aa16.96■□□□□ 0.3
UBR3-201ENST00000272793 KIAA1841Q6NSI8 718 aa16.96■□□□□ 0.3
UBR3-201ENST00000272793 DARS2Q6PI48 645 aaKnown RBP16.96■□□□□ 0.3
UBR3-201ENST00000272793 OMA1Q96E52 524 aa16.96■□□□□ 0.3
UBR3-201ENST00000272793 BICC1Q9H694 974 aaKnown RBP16.96■□□□□ 0.3
UBR3-201ENST00000272793 SARS2Q9NP81 518 aaKnown RBP16.96■□□□□ 0.3
UBR3-201ENST00000272793 NSMCE4AQ9NXX6 385 aa16.96■□□□□ 0.3
UBR3-201ENST00000272793 H2AFY2Q9P0M6 372 aaPredicted RBP16.96■□□□□ 0.3
UBR3-201ENST00000272793 ZNF215Q9UL58 517 aaPredicted RBP16.96■□□□□ 0.3
UBR3-201ENST00000272793 HORMAD1Q86X24 394 aa16.95■□□□□ 0.3
UBR3-201ENST00000272793 THAP11Q96EK4 314 aa16.95■□□□□ 0.3
UBR3-201ENST00000272793 VMP1Q96GC9 406 aa16.95■□□□□ 0.3
UBR3-201ENST00000272793 MT-ND3P03897 115 aa16.95■□□□□ 0.3
UBR3-201ENST00000272793 TAC1P20366 129 aa16.95■□□□□ 0.3
UBR3-201ENST00000272793 SNX25Q9H3E2 840 aa16.95■□□□□ 0.3
UBR3-201ENST00000272793 SEL1LQ9UBV2 794 aa16.95■□□□□ 0.3
UBR3-201ENST00000272793 ZNF555Q8NEP9 628 aa16.95■□□□□ 0.3
UBR3-201ENST00000272793 RFWD2Q8NHY2 731 aa16.95■□□□□ 0.3
UBR3-201ENST00000272793 PDCD6IPQ8WUM4 868 aaKnown RBP16.95■□□□□ 0.3
UBR3-201ENST00000272793 TUBGCP2Q9BSJ2 902 aa16.95■□□□□ 0.3
UBR3-201ENST00000272793 UTP6Q9NYH9 597 aaKnown RBP16.95■□□□□ 0.3
UBR3-201ENST00000272793 CYTH3O43739 400 aa16.95■□□□□ 0.3
UBR3-201ENST00000272793 GPR1P46091 355 aa16.95■□□□□ 0.3
UBR3-201ENST00000272793 LRRC49Q8IUZ0 686 aa16.95■□□□□ 0.3
UBR3-201ENST00000272793 hCG_1642624A0A1W2PR95 340 aa16.95■□□□□ 0.3
UBR3-201ENST00000272793 MCCD1P59942 119 aaPredicted RBP16.95■□□□□ 0.3
UBR3-201ENST00000272793 MESDQ14696 234 aa16.95■□□□□ 0.3
UBR3-201ENST00000272793 ALS2CLQ60I27 953 aa16.95■□□□□ 0.3
UBR3-201ENST00000272793 NFRKBQ6P4R8 1299 aa16.95■□□□□ 0.3
UBR3-201ENST00000272793 LMBR1LQ6UX01 489 aa16.95■□□□□ 0.3
UBR3-201ENST00000272793 INPP5DQ92835 1189 aa16.95■□□□□ 0.3
UBR3-201ENST00000272793 SPRTNQ9H040 489 aaPredicted RBP16.95■□□□□ 0.3
UBR3-201ENST00000272793 TMA7Q9Y2S6 64 aaKnown RBP16.95■□□□□ 0.3
UBR3-201ENST00000272793 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.95■□□□□ 0.3
UBR3-201ENST00000272793 GRM8O00222 908 aa16.95■□□□□ 0.3
UBR3-201ENST00000272793 ATP12AP54707 1039 aa16.95■□□□□ 0.3
UBR3-201ENST00000272793 LLGL1Q15334 1064 aa16.95■□□□□ 0.3
UBR3-201ENST00000272793 CCDC84Q86UT8 332 aaPredicted RBP16.95■□□□□ 0.3
UBR3-201ENST00000272793 HDAC1Q13547 482 aaPredicted RBP16.94■□□□□ 0.3
UBR3-201ENST00000272793 CDH24Q86UP0 819 aa16.94■□□□□ 0.3
UBR3-201ENST00000272793 CCDC61Q9Y6R9 512 aa16.94■□□□□ 0.3
UBR3-201ENST00000272793 NRG3P56975 720 aa16.94■□□□□ 0.3
UBR3-201ENST00000272793 CASS4Q9NQ75 786 aa16.94■□□□□ 0.3
UBR3-201ENST00000272793 HSPA4LO95757 839 aa16.94■□□□□ 0.3
UBR3-201ENST00000272793 DMTNQ08495 405 aa16.94■□□□□ 0.3
UBR3-201ENST00000272793 KCNV2Q8TDN2 545 aa16.94■□□□□ 0.3
UBR3-201ENST00000272793 PI4K2BG5E9Z4 385 aa16.94■□□□□ 0.3
UBR3-201ENST00000272793 FBLN1P23142 703 aa16.94■□□□□ 0.3
UBR3-201ENST00000272793 SERPINB1P30740 379 aa16.94■□□□□ 0.3
UBR3-201ENST00000272793 PSMD7P51665 324 aa16.94■□□□□ 0.3
UBR3-201ENST00000272793 PPM1KQ8N3J5 372 aa16.94■□□□□ 0.3
UBR3-201ENST00000272793 WDR64B1ANS9 1081 aa16.94■□□□□ 0.3
UBR3-201ENST00000272793 ANKRD65E5RJM6 399 aa16.94■□□□□ 0.3
UBR3-201ENST00000272793 S100A9P06702 114 aaKnown RBP16.94■□□□□ 0.3
UBR3-201ENST00000272793 CYP19A1P11511 503 aaPredicted RBP16.94■□□□□ 0.3
UBR3-201ENST00000272793 C4BPBP20851 252 aa16.94■□□□□ 0.3
UBR3-201ENST00000272793 ACAD11Q709F0 780 aa16.94■□□□□ 0.3
UBR3-201ENST00000272793 DIS3LQ8TF46 1054 aaKnown RBP16.94■□□□□ 0.3
UBR3-201ENST00000272793 ZNF556Q9HAH1 456 aa16.94■□□□□ 0.3
UBR3-201ENST00000272793 CHGBP05060 677 aa16.93■□□□□ 0.3
UBR3-201ENST00000272793 SLCO1A2P46721 670 aa16.93■□□□□ 0.3
UBR3-201ENST00000272793 RNF219Q5W0B1 726 aaPredicted RBP16.93■□□□□ 0.3
UBR3-201ENST00000272793 STXBP2Q15833 593 aa16.93■□□□□ 0.3
UBR3-201ENST00000272793 ZBED2Q9BTP6 218 aa16.93■□□□□ 0.3
UBR3-201ENST00000272793 ZC3H7BQ9UGR2 993 aaKnown RBP16.93■□□□□ 0.3
UBR3-201ENST00000272793 CITO14578 2027 aa16.93■□□□□ 0.3
UBR3-201ENST00000272793 MRPL39Q9NYK5 338 aaKnown RBP16.93■□□□□ 0.3
UBR3-201ENST00000272793 JRKLQ9Y4A0 524 aa16.93■□□□□ 0.3
UBR3-201ENST00000272793 TK2O00142 265 aa16.93■□□□□ 0.3
UBR3-201ENST00000272793 NEMP1O14524 444 aa16.93■□□□□ 0.3
UBR3-201ENST00000272793 PRKCQQ04759 706 aa16.93■□□□□ 0.3
UBR3-201ENST00000272793 SLC25A24Q6NUK1 477 aa16.93■□□□□ 0.3
UBR3-201ENST00000272793 XAGE3Q8WTP9 111 aa16.93■□□□□ 0.3
UBR3-201ENST00000272793 LRRC9Q6ZRR7 1453 aa16.93■□□□□ 0.3
UBR3-201ENST00000272793 SLC16A1P53985 500 aa16.93■□□□□ 0.3
UBR3-201ENST00000272793 ZNF568Q3ZCX4 644 aa16.93■□□□□ 0.3
UBR3-201ENST00000272793 NLRX1Q86UT6 975 aa16.93■□□□□ 0.3
UBR3-201ENST00000272793 DHX38Q92620 1227 aaKnown RBP16.93■□□□□ 0.3
UBR3-201ENST00000272793 KIFC1Q9BW19 673 aa16.93■□□□□ 0.3
UBR3-201ENST00000272793 PSMA3P25788 255 aa16.93■□□□□ 0.3
UBR3-201ENST00000272793 DEFA1P59665 94 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms