RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 BAATQ14032 418 aaPredicted RBP12.92□□□□□ -0.34
SCAF11-201ENST00000266589 PGM5Q15124 567 aa12.92□□□□□ -0.34
SCAF11-201ENST00000266589 CDKAL1Q5VV42 579 aa12.92□□□□□ -0.34
SCAF11-201ENST00000266589 NIPA1Q7RTP0 329 aa12.92□□□□□ -0.34
SCAF11-201ENST00000266589 PRRT2Q7Z6L0 340 aaPredicted RBP12.92□□□□□ -0.34
SCAF11-201ENST00000266589 NAP1L5Q96NT1 182 aaPredicted RBP12.92□□□□□ -0.34
SCAF11-201ENST00000266589 RMDN3Q96TC7 470 aa12.92□□□□□ -0.34
SCAF11-201ENST00000266589 EIF2AK1Q9BQI3 630 aaKnown RBP12.92□□□□□ -0.34
SCAF11-201ENST00000266589 WDR11Q9BZH6 1224 aa12.92□□□□□ -0.34
SCAF11-201ENST00000266589 PXMP2Q9NR77 195 aa12.92□□□□□ -0.34
SCAF11-201ENST00000266589 PSMA7O14818 248 aa12.91□□□□□ -0.34
SCAF11-201ENST00000266589 MRPS9P82933 396 aaKnown RBP12.91□□□□□ -0.34
SCAF11-201ENST00000266589 TKFCQ3LXA3 575 aa12.91□□□□□ -0.34
SCAF11-201ENST00000266589 ARHGEF16Q5VV41 709 aa12.91□□□□□ -0.34
SCAF11-201ENST00000266589 ARMC9Q7Z3E5 817 aa12.91□□□□□ -0.34
SCAF11-201ENST00000266589 TMC6Q7Z403 805 aa12.91□□□□□ -0.34
SCAF11-201ENST00000266589 PROCA1Q8NCQ7 364 aaPredicted RBP12.91□□□□□ -0.34
SCAF11-201ENST00000266589 HPS3Q969F9 1004 aa12.91□□□□□ -0.34
SCAF11-201ENST00000266589 PURBQ96QR8 312 aaKnown RBP12.91□□□□□ -0.34
SCAF11-201ENST00000266589 PDCD2LQ9BRP1 358 aa12.91□□□□□ -0.34
SCAF11-201ENST00000266589 POLR3CQ9BUI4 534 aaPredicted RBP12.91□□□□□ -0.34
SCAF11-201ENST00000266589 ACAD9Q9H845 621 aa12.91□□□□□ -0.34
SCAF11-201ENST00000266589 CLEC11AQ9Y240 323 aa12.91□□□□□ -0.34
SCAF11-201ENST00000266589 UBIAD1Q9Y5Z9 338 aa12.91□□□□□ -0.34
SCAF11-201ENST00000266589 TRIM49BA6NDI0 452 aa12.9□□□□□ -0.34
SCAF11-201ENST00000266589 MYCLP12524 364 aaPredicted RBP12.9□□□□□ -0.34
SCAF11-201ENST00000266589 PSMC6P62333 389 aa12.9□□□□□ -0.34
SCAF11-201ENST00000266589 GPBP1Q86WP2 473 aa12.9□□□□□ -0.34
SCAF11-201ENST00000266589 KIAA0895Q8NCT3 520 aa12.9□□□□□ -0.34
SCAF11-201ENST00000266589 DNAJC19Q96DA6 116 aa12.9□□□□□ -0.34
SCAF11-201ENST00000266589 TEKT3Q9BXF9 490 aa12.9□□□□□ -0.34
SCAF11-201ENST00000266589 UNC45AQ9H3U1 944 aa12.9□□□□□ -0.34
SCAF11-201ENST00000266589 SLC39A2Q9NP94 309 aa12.9□□□□□ -0.34
SCAF11-201ENST00000266589 KCNH7Q9NS40 1196 aa12.9□□□□□ -0.34
SCAF11-201ENST00000266589 BMP2KQ9NSY1 1161 aaPredicted RBP12.9□□□□□ -0.34
SCAF11-201ENST00000266589 RGL1Q9NZL6 768 aa12.9□□□□□ -0.34
SCAF11-201ENST00000266589 PKD2L1Q9P0L9 805 aa12.9□□□□□ -0.34
SCAF11-201ENST00000266589 DNM3Q9UQ16 869 aa12.9□□□□□ -0.34
SCAF11-201ENST00000266589 CXCL11O14625 94 aa12.9□□□□□ -0.34
SCAF11-201ENST00000266589 POTEJP0CG39 1038 aa12.9□□□□□ -0.34
SCAF11-201ENST00000266589 CYP11B2P19099 503 aa12.9□□□□□ -0.34
SCAF11-201ENST00000266589 PPP1R2P41236 205 aa12.9□□□□□ -0.34
SCAF11-201ENST00000266589 SLC12A3P55017 1021 aa12.9□□□□□ -0.34
SCAF11-201ENST00000266589 PPIL2Q13356 520 aa12.9□□□□□ -0.34
SCAF11-201ENST00000266589 MTMR1Q13613 665 aa12.9□□□□□ -0.34
SCAF11-201ENST00000266589 CTTNQ14247 550 aaKnown RBP12.9□□□□□ -0.34
SCAF11-201ENST00000266589 OPTNQ96CV9 577 aa12.9□□□□□ -0.34
SCAF11-201ENST00000266589 DHTKD1Q96HY7 919 aaPredicted RBP12.9□□□□□ -0.34
SCAF11-201ENST00000266589 RIT2Q99578 217 aa12.9□□□□□ -0.34
SCAF11-201ENST00000266589 HSD17B14Q9BPX1 270 aa12.9□□□□□ -0.34
SCAF11-201ENST00000266589 JADE2Q9NQC1 790 aa12.9□□□□□ -0.34
SCAF11-201ENST00000266589 INTS13Q9NVM9 706 aa12.9□□□□□ -0.34
SCAF11-201ENST00000266589 IMPACTQ9P2X3 320 aa12.9□□□□□ -0.34
SCAF11-201ENST00000266589 DDX39AO00148 427 aaKnown RBP12.89□□□□□ -0.35
SCAF11-201ENST00000266589 HOXA7P31268 230 aaPredicted RBP12.89□□□□□ -0.35
SCAF11-201ENST00000266589 PMS1P54277 932 aaKnown RBP12.89□□□□□ -0.35
SCAF11-201ENST00000266589 EHHADHQ08426 723 aa12.89□□□□□ -0.35
SCAF11-201ENST00000266589 LRMPQ12912 555 aa12.89□□□□□ -0.35
SCAF11-201ENST00000266589 COASYQ13057 564 aa12.89□□□□□ -0.35
SCAF11-201ENST00000266589 PABPC4Q13310 644 aaKnown RBP eCLIP12.89□□□□□ -0.35
SCAF11-201ENST00000266589 COBLL1Q53SF7 1204 aa12.89□□□□□ -0.35
SCAF11-201ENST00000266589 LBX2Q6XYB7 198 aa12.89□□□□□ -0.35
SCAF11-201ENST00000266589 CACTINQ8WUQ7 758 aaKnown RBP12.89□□□□□ -0.35
SCAF11-201ENST00000266589 DYDC2Q96IM9 177 aa12.89□□□□□ -0.35
SCAF11-201ENST00000266589 AGO4Q9HCK5 861 aaKnown RBP12.89□□□□□ -0.35
SCAF11-201ENST00000266589 TUFT1Q9NNX1 390 aa12.89□□□□□ -0.35
SCAF11-201ENST00000266589 A1CFQ9NQ94 594 aaKnown RBP12.89□□□□□ -0.35
SCAF11-201ENST00000266589 CYP39A1Q9NYL5 469 aa12.89□□□□□ -0.35
SCAF11-201ENST00000266589 KCNH4Q9UQ05 1017 aa12.89□□□□□ -0.35
SCAF11-201ENST00000266589 LCTP09848 1927 aa12.89□□□□□ -0.35
SCAF11-201ENST00000266589 NPHP3-ACAD11A0A0J9YXS1 232 aa12.89□□□□□ -0.35
SCAF11-201ENST00000266589 KRT18P05783 430 aaKnown RBP12.89□□□□□ -0.35
SCAF11-201ENST00000266589 IRX3P78415 501 aaPredicted RBP12.89□□□□□ -0.35
SCAF11-201ENST00000266589 PSMD2Q13200 908 aa12.89□□□□□ -0.35
SCAF11-201ENST00000266589 ARID5BQ14865 1188 aa12.89□□□□□ -0.35
SCAF11-201ENST00000266589 MAP1SQ66K74 1059 aaPredicted RBP12.89□□□□□ -0.35
SCAF11-201ENST00000266589 B3GNT9Q6UX72 402 aa12.89□□□□□ -0.35
SCAF11-201ENST00000266589 APTXQ7Z2E3 356 aaKnown RBP12.89□□□□□ -0.35
SCAF11-201ENST00000266589 TPH2Q8IWU9 490 aa12.89□□□□□ -0.35
SCAF11-201ENST00000266589 SYT2Q8N9I0 419 aaPredicted RBP12.89□□□□□ -0.35
SCAF11-201ENST00000266589 P2RX5Q93086 422 aa12.89□□□□□ -0.35
SCAF11-201ENST00000266589 TRIM47Q96LD4 638 aa12.89□□□□□ -0.35
SCAF11-201ENST00000266589 ZNF408Q9H9D4 720 aa12.89□□□□□ -0.35
SCAF11-201ENST00000266589 PANK4Q9NVE7 773 aa12.89□□□□□ -0.35
SCAF11-201ENST00000266589 A0A1B0GTH6 734 aa12.88□□□□□ -0.35
SCAF11-201ENST00000266589 TESPA1A2RU30 521 aaPredicted RBP12.88□□□□□ -0.35
SCAF11-201ENST00000266589 ZNF500O60304 480 aaPredicted RBP12.88□□□□□ -0.35
SCAF11-201ENST00000266589 PEX10O60683 326 aa12.88□□□□□ -0.35
SCAF11-201ENST00000266589 SLITRK3O94933 977 aa12.88□□□□□ -0.35
SCAF11-201ENST00000266589 CCNE1P24864 410 aa12.88□□□□□ -0.35
SCAF11-201ENST00000266589 CCND2P30279 289 aa12.88□□□□□ -0.35
SCAF11-201ENST00000266589 CLCN1P35523 988 aa12.88□□□□□ -0.35
SCAF11-201ENST00000266589 GSDMDP57764 484 aa12.88□□□□□ -0.35
SCAF11-201ENST00000266589 CACNB1Q02641 598 aaPredicted RBP12.88□□□□□ -0.35
SCAF11-201ENST00000266589 RAD51AP2Q09MP3 1159 aa12.88□□□□□ -0.35
SCAF11-201ENST00000266589 ITGB3BPQ13352 177 aaPredicted RBP12.88□□□□□ -0.35
SCAF11-201ENST00000266589 PTPN21Q16825 1174 aa12.88□□□□□ -0.35
SCAF11-201ENST00000266589 ARSHQ5FYA8 562 aa12.88□□□□□ -0.35
SCAF11-201ENST00000266589 TTI2Q6NXR4 508 aa12.88□□□□□ -0.35
SCAF11-201ENST00000266589 VSTM4Q8IW00 320 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms