RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 BARHL2Q9NY43 387 aa16.83■□□□□ 0.28
TIMP3-201ENST00000266085 R3HDM1Q15032 1099 aaKnown RBP16.82■□□□□ 0.28
TIMP3-201ENST00000266085 CCDC89Q8N998 374 aa16.82■□□□□ 0.28
TIMP3-201ENST00000266085 PIGOQ8TEQ8 1089 aa16.82■□□□□ 0.28
TIMP3-201ENST00000266085 MIS12Q9H081 205 aa16.82■□□□□ 0.28
TIMP3-201ENST00000266085 ZBTB12Q9Y330 459 aaPredicted RBP16.82■□□□□ 0.28
TIMP3-201ENST00000266085 ATP1A3P13637 1013 aa16.82■□□□□ 0.28
TIMP3-201ENST00000266085 CASP1P29466 404 aa16.82■□□□□ 0.28
TIMP3-201ENST00000266085 KRT71Q3SY84 523 aa16.82■□□□□ 0.28
TIMP3-201ENST00000266085 PRPF38AQ8NAV1 312 aaKnown RBP16.82■□□□□ 0.28
TIMP3-201ENST00000266085 PARP2Q9UGN5 583 aa16.82■□□□□ 0.28
TIMP3-201ENST00000266085 FEM1BQ9UK73 627 aa16.82■□□□□ 0.28
TIMP3-201ENST00000266085 GDAQ9Y2T3 454 aa16.82■□□□□ 0.28
TIMP3-201ENST00000266085 MEGF6O75095 1541 aa16.82■□□□□ 0.28
TIMP3-201ENST00000266085 NCOA3Q9Y6Q9 1424 aa16.82■□□□□ 0.28
TIMP3-201ENST00000266085 MFAP3P55082 362 aa16.82■□□□□ 0.28
TIMP3-201ENST00000266085 Q3C1V9 767 aa16.82■□□□□ 0.28
TIMP3-201ENST00000266085 SNRNP48Q6IEG0 339 aaKnown RBP16.82■□□□□ 0.28
TIMP3-201ENST00000266085 ADGRF4Q8IZF3 695 aa16.82■□□□□ 0.28
TIMP3-201ENST00000266085 OSBPL5Q9H0X9 879 aaPredicted RBP16.82■□□□□ 0.28
TIMP3-201ENST00000266085 PSAPP07602 524 aa16.82■□□□□ 0.28
TIMP3-201ENST00000266085 TMEM131LA2VDJ0 1609 aa16.82■□□□□ 0.28
TIMP3-201ENST00000266085 MST1RQ04912 1400 aa16.81■□□□□ 0.28
TIMP3-201ENST00000266085 ATF7P17544 494 aaPredicted RBP16.81■□□□□ 0.28
TIMP3-201ENST00000266085 RASSF7Q02833 373 aa16.81■□□□□ 0.28
TIMP3-201ENST00000266085 HADHQ16836 314 aaKnown RBP16.81■□□□□ 0.28
TIMP3-201ENST00000266085 SPOUT1Q5T280 376 aaKnown RBP16.81■□□□□ 0.28
TIMP3-201ENST00000266085 RNF146Q9NTX7 359 aa16.81■□□□□ 0.28
TIMP3-201ENST00000266085 PNMA3Q9UL41 463 aa16.81■□□□□ 0.28
TIMP3-201ENST00000266085 ZDHHC9Q9Y397 364 aa16.81■□□□□ 0.28
TIMP3-201ENST00000266085 SFI1A8K8P3 1242 aa16.81■□□□□ 0.28
TIMP3-201ENST00000266085 LMNB1P20700 586 aa16.81■□□□□ 0.28
TIMP3-201ENST00000266085 LRRC63Q05C16 580 aa16.81■□□□□ 0.28
TIMP3-201ENST00000266085 MXD3Q9BW11 206 aa16.81■□□□□ 0.28
TIMP3-201ENST00000266085 FLT1P17948 1338 aa16.81■□□□□ 0.28
TIMP3-201ENST00000266085 EHHADHQ08426 723 aa16.81■□□□□ 0.28
TIMP3-201ENST00000266085 APOBEC3FQ8IUX4 373 aaKnown RBP16.81■□□□□ 0.28
TIMP3-201ENST00000266085 SRBD1Q8N5C6 995 aaKnown RBP16.81■□□□□ 0.28
TIMP3-201ENST00000266085 GABPB2Q8TAK5 448 aaPredicted RBP16.81■□□□□ 0.28
TIMP3-201ENST00000266085 TSC1Q92574 1164 aa16.81■□□□□ 0.28
TIMP3-201ENST00000266085 THAP9Q9H5L6 903 aa16.81■□□□□ 0.28
TIMP3-201ENST00000266085 GUCY1A2P33402 732 aa16.81■□□□□ 0.28
TIMP3-201ENST00000266085 PIK3CAP42336 1068 aa16.81■□□□□ 0.28
TIMP3-201ENST00000266085 ZBED6P86452 979 aa16.81■□□□□ 0.28
TIMP3-201ENST00000266085 CFAP157Q5JU67 520 aa16.81■□□□□ 0.28
TIMP3-201ENST00000266085 TAOK1Q7L7X3 1001 aa16.81■□□□□ 0.28
TIMP3-201ENST00000266085 PPP1R13BQ96KQ4 1090 aa16.81■□□□□ 0.28
TIMP3-201ENST00000266085 RAB20Q9NX57 234 aa16.81■□□□□ 0.28
TIMP3-201ENST00000266085 ABT1Q9ULW3 272 aaKnown RBP16.81■□□□□ 0.28
TIMP3-201ENST00000266085 DCCP43146 1447 aa16.8■□□□□ 0.28
TIMP3-201ENST00000266085 MAPK8IP2Q13387 824 aaPredicted RBP16.8■□□□□ 0.28
TIMP3-201ENST00000266085 MTMR1Q13613 665 aa16.8■□□□□ 0.28
TIMP3-201ENST00000266085 CUL4BQ13620 913 aa16.8■□□□□ 0.28
TIMP3-201ENST00000266085 VSTM4Q8IW00 320 aa16.8■□□□□ 0.28
TIMP3-201ENST00000266085 IL25Q9H293 177 aa16.8■□□□□ 0.28
TIMP3-201ENST00000266085 CDC23Q9UJX2 597 aa16.8■□□□□ 0.28
TIMP3-201ENST00000266085 PALM3A6NDB9 673 aaPredicted RBP16.8■□□□□ 0.28
TIMP3-201ENST00000266085 LRRN2O75325 713 aa16.8■□□□□ 0.28
TIMP3-201ENST00000266085 CLEC10AQ8IUN9 316 aa16.8■□□□□ 0.28
TIMP3-201ENST00000266085 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.8■□□□□ 0.28
TIMP3-201ENST00000266085 RIOK1Q9BRS2 568 aaKnown RBP16.8■□□□□ 0.28
TIMP3-201ENST00000266085 SPON1Q9HCB6 807 aa16.8■□□□□ 0.28
TIMP3-201ENST00000266085 MYO1FO00160 1098 aa16.8■□□□□ 0.28
TIMP3-201ENST00000266085 CALRP27797 417 aaKnown RBP16.8■□□□□ 0.28
TIMP3-201ENST00000266085 SBK1Q52WX2 424 aa16.8■□□□□ 0.28
TIMP3-201ENST00000266085 IGDCC4Q8TDY8 1250 aa16.8■□□□□ 0.28
TIMP3-201ENST00000266085 MTMR4Q9NYA4 1195 aa16.8■□□□□ 0.28
TIMP3-201ENST00000266085 FBXO40Q9UH90 709 aa16.8■□□□□ 0.28
TIMP3-201ENST00000266085 RNF8O76064 485 aa16.79■□□□□ 0.28
TIMP3-201ENST00000266085 SLC35F6Q8N357 371 aa16.79■□□□□ 0.28
TIMP3-201ENST00000266085 MICALL1Q8N3F8 863 aa16.79■□□□□ 0.28
TIMP3-201ENST00000266085 LGSNQ5TDP6 509 aa16.79■□□□□ 0.28
TIMP3-201ENST00000266085 SCYL2Q6P3W7 929 aa16.79■□□□□ 0.28
TIMP3-201ENST00000266085 NDST4Q9H3R1 872 aa16.79■□□□□ 0.28
TIMP3-201ENST00000266085 KRT15P19012 456 aa16.79■□□□□ 0.28
TIMP3-201ENST00000266085 MARK3P27448 753 aa16.79■□□□□ 0.28
TIMP3-201ENST00000266085 ITIH3Q06033 890 aa16.79■□□□□ 0.28
TIMP3-201ENST00000266085 DENND2CQ68D51 928 aa16.79■□□□□ 0.28
TIMP3-201ENST00000266085 PPM1EQ8WY54 764 aa16.79■□□□□ 0.28
TIMP3-201ENST00000266085 FAM20AQ96MK3 541 aa16.79■□□□□ 0.28
TIMP3-201ENST00000266085 SERPINA10Q9UK55 444 aa16.79■□□□□ 0.28
TIMP3-201ENST00000266085 NUB1Q9Y5A7 615 aa16.79■□□□□ 0.28
TIMP3-201ENST00000266085 TAF6LQ9Y6J9 622 aa16.79■□□□□ 0.28
TIMP3-201ENST00000266085 VWDEQ8N2E2 1590 aa16.79■□□□□ 0.28
TIMP3-201ENST00000266085 ABCD1P33897 745 aa16.79■□□□□ 0.28
TIMP3-201ENST00000266085 DDIT3P35638 169 aa16.79■□□□□ 0.28
TIMP3-201ENST00000266085 TTBK2Q6IQ55 1244 aa16.79■□□□□ 0.28
TIMP3-201ENST00000266085 PPP1R18Q6NYC8 613 aa16.79■□□□□ 0.28
TIMP3-201ENST00000266085 CASC4Q6P4E1 433 aa16.79■□□□□ 0.28
TIMP3-201ENST00000266085 EXOC8Q8IYI6 725 aa16.79■□□□□ 0.28
TIMP3-201ENST00000266085 EPB41L4AQ9HCS5 686 aaPredicted RBP16.79■□□□□ 0.28
TIMP3-201ENST00000266085 TFAMQ00059 246 aaKnown RBP16.78■□□□□ 0.28
TIMP3-201ENST00000266085 INTS8Q75QN2 995 aaKnown RBP16.78■□□□□ 0.28
TIMP3-201ENST00000266085 FMR1NBQ8N0W7 255 aaPredicted RBP16.78■□□□□ 0.28
TIMP3-201ENST00000266085 C2orf69Q8N8R5 385 aa16.78■□□□□ 0.28
TIMP3-201ENST00000266085 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.78■□□□□ 0.28
TIMP3-201ENST00000266085 K7ERI5 159 aa16.78■□□□□ 0.28
TIMP3-201ENST00000266085 CAPN9O14815 690 aa16.78■□□□□ 0.28
TIMP3-201ENST00000266085 STAM2O75886 525 aa16.78■□□□□ 0.28
TIMP3-201ENST00000266085 MXI1P50539 228 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms