RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 PTPAQ15257 358 aa16.17■□□□□ 0.18
SSBP1-201ENST00000265304 TMEM63BQ5T3F8 832 aa16.17■□□□□ 0.18
SSBP1-201ENST00000265304 METTL7BQ6UX53 244 aa16.17■□□□□ 0.18
SSBP1-201ENST00000265304 KLHDC9Q8NEP7 349 aa16.17■□□□□ 0.18
SSBP1-201ENST00000265304 UNC93B1Q9H1C4 597 aa16.17■□□□□ 0.18
SSBP1-201ENST00000265304 POLR3EQ9NVU0 708 aa16.17■□□□□ 0.18
SSBP1-201ENST00000265304 CHMP5Q9NZZ3 219 aa16.17■□□□□ 0.18
SSBP1-201ENST00000265304 ZHX1Q9UKY1 873 aaPredicted RBP16.17■□□□□ 0.18
SSBP1-201ENST00000265304 MRVI1Q9Y6F6 885 aa16.17■□□□□ 0.18
SSBP1-201ENST00000265304 NEMFO60524 1076 aa16.16■□□□□ 0.18
SSBP1-201ENST00000265304 ADAMTS4O75173 837 aa16.16■□□□□ 0.18
SSBP1-201ENST00000265304 FARP2O94887 1054 aaPredicted RBP16.16■□□□□ 0.18
SSBP1-201ENST00000265304 GH1P01241 217 aa16.16■□□□□ 0.18
SSBP1-201ENST00000265304 ATP2C1P98194 919 aaPredicted RBP16.16■□□□□ 0.18
SSBP1-201ENST00000265304 SPIRE1Q08AE8 756 aa16.16■□□□□ 0.18
SSBP1-201ENST00000265304 MTFR1Q15390 333 aa16.16■□□□□ 0.18
SSBP1-201ENST00000265304 LY6KQ17RY6 165 aa16.16■□□□□ 0.18
SSBP1-201ENST00000265304 ARL6IP4Q66PJ3 421 aaKnown RBP16.16■□□□□ 0.18
SSBP1-201ENST00000265304 CCSAPQ6IQ19 270 aaPredicted RBP16.16■□□□□ 0.18
SSBP1-201ENST00000265304 SLFN12Q8IYM2 578 aa16.16■□□□□ 0.18
SSBP1-201ENST00000265304 TMEM60Q9H2L4 133 aa16.16■□□□□ 0.18
SSBP1-201ENST00000265304 OGDHLQ9ULD0 1010 aa16.16■□□□□ 0.18
SSBP1-201ENST00000265304 ATP6V1DQ9Y5K8 247 aa16.16■□□□□ 0.18
SSBP1-201ENST00000265304 BRCA2P51587 3418 aa16.16■□□□□ 0.18
SSBP1-201ENST00000265304 KAT6AQ92794 2004 aa16.16■□□□□ 0.18
SSBP1-201ENST00000265304 RARBP10826 455 aa16.15■□□□□ 0.18
SSBP1-201ENST00000265304 PTGDRQ13258 359 aa16.15■□□□□ 0.18
SSBP1-201ENST00000265304 PPP2R5CQ13362 524 aa16.15■□□□□ 0.18
SSBP1-201ENST00000265304 SLC39A14Q15043 492 aa16.15■□□□□ 0.18
SSBP1-201ENST00000265304 ZNF174Q15697 407 aa16.15■□□□□ 0.18
SSBP1-201ENST00000265304 COL13A1Q5TAT6 717 aaPredicted RBP16.15■□□□□ 0.18
SSBP1-201ENST00000265304 FAM173BQ6P4H8 233 aa16.15■□□□□ 0.18
SSBP1-201ENST00000265304 ZNF577Q9BSK1 485 aa16.15■□□□□ 0.18
SSBP1-201ENST00000265304 BCAS3Q9H6U6 928 aa16.15■□□□□ 0.18
SSBP1-201ENST00000265304 IGKV6D-21A0A0A0MT36 114 aa16.14■□□□□ 0.17
SSBP1-201ENST00000265304 PPFIA4O75335 1185 aa16.14■□□□□ 0.17
SSBP1-201ENST00000265304 GGPS1O95749 300 aa16.14■□□□□ 0.17
SSBP1-201ENST00000265304 MCM7P33993 719 aa16.14■□□□□ 0.17
SSBP1-201ENST00000265304 PDIA5Q14554 519 aa16.14■□□□□ 0.17
SSBP1-201ENST00000265304 NBR1Q14596 966 aa16.14■□□□□ 0.17
SSBP1-201ENST00000265304 ANO1Q5XXA6 986 aa16.14■□□□□ 0.17
SSBP1-201ENST00000265304 ZNF746Q6NUN9 644 aaPredicted RBP16.14■□□□□ 0.17
SSBP1-201ENST00000265304 CLEC17AQ6ZS10 378 aa16.14■□□□□ 0.17
SSBP1-201ENST00000265304 RDM1Q8NG50 284 aa16.14■□□□□ 0.17
SSBP1-201ENST00000265304 PPTC7Q8NI37 304 aa16.14■□□□□ 0.17
SSBP1-201ENST00000265304 ZNF396Q96N95 335 aaPredicted RBP16.14■□□□□ 0.17
SSBP1-201ENST00000265304 USP28Q96RU2 1077 aa16.14■□□□□ 0.17
SSBP1-201ENST00000265304 RCOR1Q9UKL0 485 aa16.14■□□□□ 0.17
SSBP1-201ENST00000265304 VAV3Q9UKW4 847 aa16.14■□□□□ 0.17
SSBP1-201ENST00000265304 BAG4O95429 457 aaKnown RBP16.13■□□□□ 0.17
SSBP1-201ENST00000265304 SGPL1O95470 568 aa16.13■□□□□ 0.17
SSBP1-201ENST00000265304 YEATS4O95619 227 aa16.13■□□□□ 0.17
SSBP1-201ENST00000265304 GJA8P48165 433 aa16.13■□□□□ 0.17
SSBP1-201ENST00000265304 FXR2P51116 673 aaKnown RBP eCLIP16.13■□□□□ 0.17
SSBP1-201ENST00000265304 KRT76Q01546 638 aa16.13■□□□□ 0.17
SSBP1-201ENST00000265304 SF3A1Q15459 793 aaKnown RBP16.13■□□□□ 0.17
SSBP1-201ENST00000265304 CALCRLQ16602 461 aa16.13■□□□□ 0.17
SSBP1-201ENST00000265304 DHX37Q8IY37 1157 aaKnown RBP16.13■□□□□ 0.17
SSBP1-201ENST00000265304 IGSF22Q8N9C0 903 aa16.13■□□□□ 0.17
SSBP1-201ENST00000265304 LINC00301Q8NCQ3 95 aa16.13■□□□□ 0.17
SSBP1-201ENST00000265304 COPS5Q92905 334 aa16.13■□□□□ 0.17
SSBP1-201ENST00000265304 SDF4Q9BRK5 362 aa16.13■□□□□ 0.17
SSBP1-201ENST00000265304 TSEN34Q9BSV6 310 aaKnown RBP16.13■□□□□ 0.17
SSBP1-201ENST00000265304 RNF208Q9H0X6 261 aa16.13■□□□□ 0.17
SSBP1-201ENST00000265304 JPH1Q9HDC5 661 aaPredicted RBP16.13■□□□□ 0.17
SSBP1-201ENST00000265304 PCDHA12Q9UN75 941 aa16.13■□□□□ 0.17
SSBP1-201ENST00000265304 CEP131Q9UPN4 1083 aa16.13■□□□□ 0.17
SSBP1-201ENST00000265304 SYNRGQ9UMZ2 1314 aa16.13■□□□□ 0.17
SSBP1-201ENST00000265304 GSTTP1A0A1W2PQM5 241 aa16.12■□□□□ 0.17
SSBP1-201ENST00000265304 KPNA6O60684 536 aa16.12■□□□□ 0.17
SSBP1-201ENST00000265304 LGR5O75473 907 aa16.12■□□□□ 0.17
SSBP1-201ENST00000265304 CCNE2O96020 404 aa16.12■□□□□ 0.17
SSBP1-201ENST00000265304 OR52Z1P0C646 297 aa16.12■□□□□ 0.17
SSBP1-201ENST00000265304 CNGA1P29973 690 aa16.12■□□□□ 0.17
SSBP1-201ENST00000265304 HSDL1Q3SXM5 330 aa16.12■□□□□ 0.17
SSBP1-201ENST00000265304 GJC2Q5T442 439 aaPredicted RBP16.12■□□□□ 0.17
SSBP1-201ENST00000265304 LRCH2Q5VUJ6 765 aa16.12■□□□□ 0.17
SSBP1-201ENST00000265304 ABHD15Q6UXT9 468 aa16.12■□□□□ 0.17
SSBP1-201ENST00000265304 CYFIP1Q7L576 1253 aa16.12■□□□□ 0.17
SSBP1-201ENST00000265304 TLK2Q86UE8 772 aa16.12■□□□□ 0.17
SSBP1-201ENST00000265304 SMAP1Q8IYB5 467 aaPredicted RBP16.12■□□□□ 0.17
SSBP1-201ENST00000265304 ANKLE1Q8NAG6 615 aa16.12■□□□□ 0.17
SSBP1-201ENST00000265304 ARRDC4Q8NCT1 418 aa16.12■□□□□ 0.17
SSBP1-201ENST00000265304 GPR20Q99678 358 aa16.12■□□□□ 0.17
SSBP1-201ENST00000265304 XPNPEP3Q9NQH7 507 aa16.12■□□□□ 0.17
SSBP1-201ENST00000265304 SLC9A2Q9UBY0 812 aa16.12■□□□□ 0.17
SSBP1-201ENST00000265304 CFAP45Q9UL16 551 aa16.12■□□□□ 0.17
SSBP1-201ENST00000265304 CLIC4Q9Y696 253 aa16.12■□□□□ 0.17
SSBP1-201ENST00000265304 DYNC1LI2O43237 492 aaPredicted RBP16.11■□□□□ 0.17
SSBP1-201ENST00000265304 GAS7O60861 476 aa16.11■□□□□ 0.17
SSBP1-201ENST00000265304 PPP6R2O75170 966 aa16.11■□□□□ 0.17
SSBP1-201ENST00000265304 ATP2B1P20020 1258 aa16.11■□□□□ 0.17
SSBP1-201ENST00000265304 SFNP31947 248 aa16.11■□□□□ 0.17
SSBP1-201ENST00000265304 MNX1P50219 401 aaPredicted RBP16.11■□□□□ 0.17
SSBP1-201ENST00000265304 IL17AQ16552 155 aa16.11■□□□□ 0.17
SSBP1-201ENST00000265304 U2AF1L4Q8WU68 220 aaKnown RBP16.11■□□□□ 0.17
SSBP1-201ENST00000265304 SEPT1Q8WYJ6 367 aa16.11■□□□□ 0.17
SSBP1-201ENST00000265304 DEFB118Q96PH6 123 aa16.11■□□□□ 0.17
SSBP1-201ENST00000265304 TEKT3Q9BXF9 490 aa16.11■□□□□ 0.17
SSBP1-201ENST00000265304 AP5M1Q9H0R1 490 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms