RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 CNKSR2Q8WXI2 1034 aa10.33□□□□□ -0.76
SSR3-201ENST00000265044 BAG1Q99933 345 aaPredicted RBP10.33□□□□□ -0.76
SSR3-201ENST00000265044 PYCARDQ9ULZ3 195 aa10.33□□□□□ -0.76
SSR3-201ENST00000265044 LUC7L2Q9Y383 392 aaKnown RBP10.33□□□□□ -0.76
SSR3-201ENST00000265044 A0A1B0GUL6 1792 aa10.33□□□□□ -0.76
SSR3-201ENST00000265044 TBX3O15119 743 aa10.33□□□□□ -0.76
SSR3-201ENST00000265044 ZSCAN12O43309 604 aa10.33□□□□□ -0.76
SSR3-201ENST00000265044 NR3C2P08235 984 aa10.33□□□□□ -0.76
SSR3-201ENST00000265044 ARP10275 920 aa10.33□□□□□ -0.76
SSR3-201ENST00000265044 HIRAP54198 1017 aaPredicted RBP10.33□□□□□ -0.76
SSR3-201ENST00000265044 CCDC144BQ3MJ40 725 aa10.33□□□□□ -0.76
SSR3-201ENST00000265044 MUM1L1Q5H9M0 696 aa10.33□□□□□ -0.76
SSR3-201ENST00000265044 UTP14CQ5TAP6 766 aaKnown RBP10.33□□□□□ -0.76
SSR3-201ENST00000265044 PNMA8AQ86V59 439 aaPredicted RBP10.33□□□□□ -0.76
SSR3-201ENST00000265044 CATSPER3Q86XQ3 398 aa10.33□□□□□ -0.76
SSR3-201ENST00000265044 C2orf69Q8N8R5 385 aa10.33□□□□□ -0.76
SSR3-201ENST00000265044 TEPSINQ96N21 525 aa10.33□□□□□ -0.76
SSR3-201ENST00000265044 MTMR9Q96QG7 549 aa10.33□□□□□ -0.76
SSR3-201ENST00000265044 KCNH7Q9NS40 1196 aa10.33□□□□□ -0.76
SSR3-201ENST00000265044 PCDHB13Q9Y5F0 798 aa10.33□□□□□ -0.76
SSR3-201ENST00000265044 SCN9AQ15858 1988 aa10.33□□□□□ -0.76
SSR3-201ENST00000265044 CD44P16070 742 aaKnown RBP10.33□□□□□ -0.76
SSR3-201ENST00000265044 RPL13P26373 211 aaKnown RBP10.33□□□□□ -0.76
SSR3-201ENST00000265044 KRT9P35527 623 aa10.33□□□□□ -0.76
SSR3-201ENST00000265044 NOVP48745 357 aa10.33□□□□□ -0.76
SSR3-201ENST00000265044 COPB1P53618 953 aaKnown RBP10.33□□□□□ -0.76
SSR3-201ENST00000265044 MDM2Q00987 491 aaPredicted RBP10.33□□□□□ -0.76
SSR3-201ENST00000265044 ERO1BQ86YB8 467 aa10.33□□□□□ -0.76
SSR3-201ENST00000265044 HAS1Q92839 578 aa10.33□□□□□ -0.76
SSR3-201ENST00000265044 GLG1Q92896 1179 aa10.33□□□□□ -0.76
SSR3-201ENST00000265044 MXRA8Q9BRK3 442 aa10.33□□□□□ -0.76
SSR3-201ENST00000265044 ADD3Q9UEY8 706 aaKnown RBP10.33□□□□□ -0.76
SSR3-201ENST00000265044 SRCAPQ6ZRS2 3230 aa10.33□□□□□ -0.76
SSR3-201ENST00000265044 M0R2N6 131 aa10.32□□□□□ -0.76
SSR3-201ENST00000265044 IRF6O14896 467 aa10.32□□□□□ -0.76
SSR3-201ENST00000265044 E2F4Q16254 413 aa10.32□□□□□ -0.76
SSR3-201ENST00000265044 FAM102BQ5T8I3 360 aa10.32□□□□□ -0.76
SSR3-201ENST00000265044 ELOA2Q8IYF1 753 aaPredicted RBP10.32□□□□□ -0.76
SSR3-201ENST00000265044 CNOT6LQ96LI5 555 aaKnown RBP10.32□□□□□ -0.76
SSR3-201ENST00000265044 SCLT1Q96NL6 688 aa10.32□□□□□ -0.76
SSR3-201ENST00000265044 LXNQ9BS40 222 aa10.32□□□□□ -0.76
SSR3-201ENST00000265044 TUBGCP2Q9BSJ2 902 aa10.32□□□□□ -0.76
SSR3-201ENST00000265044 SLC38A10Q9HBR0 1119 aa10.32□□□□□ -0.76
SSR3-201ENST00000265044 KBTBD4Q9NVX7 518 aa10.32□□□□□ -0.76
SSR3-201ENST00000265044 LARSQ9P2J5 1176 aaKnown RBP10.32□□□□□ -0.76
SSR3-201ENST00000265044 PVALEFA0A1B0GWK0 134 aa10.32□□□□□ -0.76
SSR3-201ENST00000265044 MED24O75448 989 aa10.32□□□□□ -0.76
SSR3-201ENST00000265044 BMP6P22004 513 aa10.32□□□□□ -0.76
SSR3-201ENST00000265044 ARID5AQ03989 594 aa10.32□□□□□ -0.76
SSR3-201ENST00000265044 ADAM9Q13443 819 aa10.32□□□□□ -0.76
SSR3-201ENST00000265044 KIAA1328Q86T90 577 aa10.32□□□□□ -0.76
SSR3-201ENST00000265044 SYTL5Q8TDW5 730 aaPredicted RBP10.32□□□□□ -0.76
SSR3-201ENST00000265044 MTMR8Q96EF0 704 aa10.32□□□□□ -0.76
SSR3-201ENST00000265044 CDCA5Q96FF9 252 aa10.32□□□□□ -0.76
SSR3-201ENST00000265044 ARID3AQ99856 593 aa10.32□□□□□ -0.76
SSR3-201ENST00000265044 ZSWIM4Q9H7M6 989 aa10.32□□□□□ -0.76
SSR3-201ENST00000265044 PHF20L1A8MW92 1017 aa10.32□□□□□ -0.76
SSR3-201ENST00000265044 YBX3P16989 372 aaKnown RBP eCLIP10.32□□□□□ -0.765e-9■□□□□ 10.9
SSR3-201ENST00000265044 COASYQ13057 564 aa10.32□□□□□ -0.76
SSR3-201ENST00000265044 KCNB1Q14721 858 aa10.32□□□□□ -0.76
SSR3-201ENST00000265044 KRT31Q15323 416 aa10.32□□□□□ -0.76
SSR3-201ENST00000265044 CT47A1Q5JQC4 288 aaPredicted RBP10.32□□□□□ -0.76
SSR3-201ENST00000265044 CNGA4Q8IV77 575 aa10.32□□□□□ -0.76
SSR3-201ENST00000265044 CLMNQ96JQ2 1002 aa10.32□□□□□ -0.76
SSR3-201ENST00000265044 PURBQ96QR8 312 aaKnown RBP10.32□□□□□ -0.76
SSR3-201ENST00000265044 C7orf25Q9BPX7 421 aa10.32□□□□□ -0.76
SSR3-201ENST00000265044 FBXO40Q9UH90 709 aa10.32□□□□□ -0.76
SSR3-201ENST00000265044 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.32□□□□□ -0.76
SSR3-201ENST00000265044 DKC1O60832 514 aaKnown RBP eCLIP10.31□□□□□ -0.76
SSR3-201ENST00000265044 PRPF6O94906 941 aaKnown RBP10.31□□□□□ -0.76
SSR3-201ENST00000265044 RHOBTB3O94955 611 aa10.31□□□□□ -0.76
SSR3-201ENST00000265044 RPA1P27694 616 aa10.31□□□□□ -0.76
SSR3-201ENST00000265044 DSG3P32926 999 aa10.31□□□□□ -0.76
SSR3-201ENST00000265044 SARSP49591 514 aaKnown RBP10.31□□□□□ -0.76
SSR3-201ENST00000265044 SMTNP53814 917 aa10.31□□□□□ -0.76
SSR3-201ENST00000265044 STXBP2Q15833 593 aa10.31□□□□□ -0.76
SSR3-201ENST00000265044 OTUD6AQ7L8S5 288 aa10.31□□□□□ -0.76
SSR3-201ENST00000265044 CDHR1Q96JP9 859 aa10.31□□□□□ -0.76
SSR3-201ENST00000265044 WDR18Q9BV38 432 aa10.31□□□□□ -0.76
SSR3-201ENST00000265044 AZI2Q9H6S1 392 aa10.31□□□□□ -0.76
SSR3-201ENST00000265044 FAM207AQ9NSI2 230 aaPredicted RBP10.31□□□□□ -0.76
SSR3-201ENST00000265044 TBC1D22BQ9NU19 505 aa10.31□□□□□ -0.76
SSR3-201ENST00000265044 PPP1R3GB7ZBB8 358 aa10.31□□□□□ -0.76
SSR3-201ENST00000265044 TEX33O43247 280 aa10.31□□□□□ -0.76
SSR3-201ENST00000265044 CDC25BP30305 580 aa10.31□□□□□ -0.76
SSR3-201ENST00000265044 NAALADL2Q58DX5 795 aa10.31□□□□□ -0.76
SSR3-201ENST00000265044 MOXD1Q6UVY6 613 aa10.31□□□□□ -0.76
SSR3-201ENST00000265044 USP50Q70EL3 339 aaPredicted RBP10.31□□□□□ -0.76
SSR3-201ENST00000265044 FASTKD5Q7L8L6 764 aaKnown RBP10.31□□□□□ -0.76
SSR3-201ENST00000265044 KCNK18Q7Z418 384 aa10.31□□□□□ -0.76
SSR3-201ENST00000265044 SFR1Q86XK3 245 aa10.31□□□□□ -0.76
SSR3-201ENST00000265044 CEP170P1Q96L14 293 aa10.31□□□□□ -0.76
SSR3-201ENST00000265044 SPAG5Q96R06 1193 aa10.31□□□□□ -0.76
SSR3-201ENST00000265044 CRACR2AQ9BSW2 395 aa10.31□□□□□ -0.76
SSR3-201ENST00000265044 TCHPQ9BT92 498 aa10.31□□□□□ -0.76
SSR3-201ENST00000265044 COL11A2P13942 1736 aaPredicted RBP10.31□□□□□ -0.76
SSR3-201ENST00000265044 K7ENM7 598 aa10.31□□□□□ -0.76
SSR3-201ENST00000265044 CLIC2O15247 247 aa10.31□□□□□ -0.76
SSR3-201ENST00000265044 CALUO43852 315 aaPredicted RBP10.31□□□□□ -0.76
SSR3-201ENST00000265044 USP2O75604 605 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms