RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 XPNPEP3Q9NQH7 507 aa18.82■□□□□ 0.6
CHCHD3-201ENST00000262570 TBC1D22BQ9NU19 505 aa18.82■□□□□ 0.6
CHCHD3-201ENST00000262570 CIZ1Q9ULV3 898 aaPredicted RBP18.82■□□□□ 0.6
CHCHD3-201ENST00000262570 NFASCO94856 1347 aa18.82■□□□□ 0.6
CHCHD3-201ENST00000262570 ADAMTS4O75173 837 aa18.81■□□□□ 0.6
CHCHD3-201ENST00000262570 SGPL1O95470 568 aa18.81■□□□□ 0.6
CHCHD3-201ENST00000262570 PGK1P00558 417 aa18.81■□□□□ 0.6
CHCHD3-201ENST00000262570 NKX3-2P78367 333 aa18.81■□□□□ 0.6
CHCHD3-201ENST00000262570 C4orf32Q8N8J7 132 aa18.81■□□□□ 0.6
CHCHD3-201ENST00000262570 U2AF1L4Q8WU68 220 aaKnown RBP18.81■□□□□ 0.6
CHCHD3-201ENST00000262570 GJA10Q969M2 543 aa18.81■□□□□ 0.6
CHCHD3-201ENST00000262570 MTMR9Q96QG7 549 aa18.81■□□□□ 0.6
CHCHD3-201ENST00000262570 RIT2Q99578 217 aa18.81■□□□□ 0.6
CHCHD3-201ENST00000262570 TMEM60Q9H2L4 133 aa18.81■□□□□ 0.6
CHCHD3-201ENST00000262570 MLXIPQ9HAP2 919 aa18.81■□□□□ 0.6
CHCHD3-201ENST00000262570 SYNRGQ9UMZ2 1314 aa18.81■□□□□ 0.6
CHCHD3-201ENST00000262570 CTAGE5O15320 804 aa18.81■□□□□ 0.6
CHCHD3-201ENST00000262570 CALCRLQ16602 461 aa18.81■□□□□ 0.6
CHCHD3-201ENST00000262570 OR6J1Q8NGC5 347 aa18.81■□□□□ 0.6
CHCHD3-201ENST00000262570 SDF4Q9BRK5 362 aa18.81■□□□□ 0.6
CHCHD3-201ENST00000262570 TMEM106CQ9BVX2 250 aa18.81■□□□□ 0.6
CHCHD3-201ENST00000262570 CRISPLD2Q9H0B8 497 aa18.81■□□□□ 0.6
CHCHD3-201ENST00000262570 AP5M1Q9H0R1 490 aa18.81■□□□□ 0.6
CHCHD3-201ENST00000262570 SPC25Q9HBM1 224 aa18.81■□□□□ 0.6
CHCHD3-201ENST00000262570 OGDHLQ9ULD0 1010 aa18.81■□□□□ 0.6
CHCHD3-201ENST00000262570 SORBS3O60504 671 aa18.8■□□□□ 0.6
CHCHD3-201ENST00000262570 PSMD10O75832 226 aa18.8■□□□□ 0.6
CHCHD3-201ENST00000262570 C6orf222P0C671 652 aaPredicted RBP18.8■□□□□ 0.6
CHCHD3-201ENST00000262570 GJA8P48165 433 aa18.8■□□□□ 0.6
CHCHD3-201ENST00000262570 IRX5P78411 483 aaPredicted RBP18.8■□□□□ 0.6
CHCHD3-201ENST00000262570 PTGDRQ13258 359 aa18.8■□□□□ 0.6
CHCHD3-201ENST00000262570 HSDL1Q3SXM5 330 aa18.8■□□□□ 0.6
CHCHD3-201ENST00000262570 LRCH2Q5VUJ6 765 aa18.8■□□□□ 0.6
CHCHD3-201ENST00000262570 SLFN12Q8IYM2 578 aa18.8■□□□□ 0.6
CHCHD3-201ENST00000262570 ABHD8Q96I13 439 aa18.8■□□□□ 0.6
CHCHD3-201ENST00000262570 SPATA33Q96N06 139 aa18.8■□□□□ 0.6
CHCHD3-201ENST00000262570 JPH1Q9HDC5 661 aaPredicted RBP18.8■□□□□ 0.6
CHCHD3-201ENST00000262570 SLC9A2Q9UBY0 812 aa18.8■□□□□ 0.6
CHCHD3-201ENST00000262570 A6NJR5 290 aa18.79■□□□□ 0.6
CHCHD3-201ENST00000262570 BAG4O95429 457 aaKnown RBP18.79■□□□□ 0.6
CHCHD3-201ENST00000262570 SF3A1Q15459 793 aaKnown RBP18.79■□□□□ 0.6
CHCHD3-201ENST00000262570 KLHDC9Q8NEP7 349 aa18.79■□□□□ 0.6
CHCHD3-201ENST00000262570 PPTC7Q8NI37 304 aa18.79■□□□□ 0.6
CHCHD3-201ENST00000262570 AFG1LQ8WV93 481 aa18.79■□□□□ 0.6
CHCHD3-201ENST00000262570 USP28Q96RU2 1077 aa18.79■□□□□ 0.6
CHCHD3-201ENST00000262570 FTOQ9C0B1 505 aaKnown RBP eCLIP18.79■□□□□ 0.6
CHCHD3-201ENST00000262570 CLIC4Q9Y696 253 aa18.79■□□□□ 0.6
CHCHD3-201ENST00000262570 KIAA0100Q14667 2235 aaKnown RBP18.78■□□□□ 0.6
CHCHD3-201ENST00000262570 MYADML2A6NDP7 307 aa18.78■□□□□ 0.6
CHCHD3-201ENST00000262570 LAD1O00515 517 aa18.78■□□□□ 0.6
CHCHD3-201ENST00000262570 MARCH6O60337 910 aa18.78■□□□□ 0.6
CHCHD3-201ENST00000262570 GAS7O60861 476 aa18.78■□□□□ 0.6
CHCHD3-201ENST00000262570 OR52Z1P0C646 297 aa18.78■□□□□ 0.6
CHCHD3-201ENST00000262570 CST5P28325 142 aaPredicted RBP18.78■□□□□ 0.6
CHCHD3-201ENST00000262570 CPT1AP50416 773 aa18.78■□□□□ 0.6
CHCHD3-201ENST00000262570 LRRC41Q15345 812 aa18.78■□□□□ 0.6
CHCHD3-201ENST00000262570 FSCN1Q16658 493 aaKnown RBP18.78■□□□□ 0.6
CHCHD3-201ENST00000262570 B3GNT9Q6UX72 402 aa18.78■□□□□ 0.6
CHCHD3-201ENST00000262570 TNS4Q8IZW8 715 aa18.78■□□□□ 0.6
CHCHD3-201ENST00000262570 TEKT3Q9BXF9 490 aa18.78■□□□□ 0.6
CHCHD3-201ENST00000262570 TELO2Q9Y4R8 837 aa18.78■□□□□ 0.6
CHCHD3-201ENST00000262570 DDX39AO00148 427 aaKnown RBP18.77■□□□□ 0.6
CHCHD3-201ENST00000262570 BMP15O95972 392 aa18.77■□□□□ 0.6
CHCHD3-201ENST00000262570 CCNE2O96020 404 aa18.77■□□□□ 0.6
CHCHD3-201ENST00000262570 TXKP42681 527 aa18.77■□□□□ 0.6
CHCHD3-201ENST00000262570 ATP2C1P98194 919 aaPredicted RBP18.77■□□□□ 0.6
CHCHD3-201ENST00000262570 BEX3Q00994 111 aa18.77■□□□□ 0.6
CHCHD3-201ENST00000262570 FOXD4L6Q3SYB3 417 aaPredicted RBP18.77■□□□□ 0.6
CHCHD3-201ENST00000262570 GNASQ5JWF2 1037 aa18.77■□□□□ 0.6
CHCHD3-201ENST00000262570 CCSAPQ6IQ19 270 aaPredicted RBP18.77■□□□□ 0.6
CHCHD3-201ENST00000262570 FOXD4L3Q6VB84 417 aaPredicted RBP18.77■□□□□ 0.6
CHCHD3-201ENST00000262570 RNF180Q86T96 592 aa18.77■□□□□ 0.6
CHCHD3-201ENST00000262570 ARRDC4Q8NCT1 418 aa18.77■□□□□ 0.6
CHCHD3-201ENST00000262570 ZNF396Q96N95 335 aaPredicted RBP18.77■□□□□ 0.6
CHCHD3-201ENST00000262570 GPR20Q99678 358 aa18.77■□□□□ 0.6
CHCHD3-201ENST00000262570 POLR3EQ9NVU0 708 aa18.77■□□□□ 0.6
CHCHD3-201ENST00000262570 CHMP5Q9NZZ3 219 aa18.77■□□□□ 0.6
CHCHD3-201ENST00000262570 VAV3Q9UKW4 847 aa18.77■□□□□ 0.6
CHCHD3-201ENST00000262570 PCDHA12Q9UN75 941 aa18.77■□□□□ 0.6
CHCHD3-201ENST00000262570 CEP131Q9UPN4 1083 aa18.77■□□□□ 0.6
CHCHD3-201ENST00000262570 ATP6V1DQ9Y5K8 247 aa18.77■□□□□ 0.6
CHCHD3-201ENST00000262570 NOP56O00567 594 aaKnown RBP18.76■□□□□ 0.59
CHCHD3-201ENST00000262570 PPFIA4O75335 1185 aa18.76■□□□□ 0.59
CHCHD3-201ENST00000262570 TFRCP02786 760 aaKnown RBP18.76■□□□□ 0.59
CHCHD3-201ENST00000262570 MMP3P08254 477 aa18.76■□□□□ 0.59
CHCHD3-201ENST00000262570 HOXD8P13378 290 aaPredicted RBP18.76■□□□□ 0.59
CHCHD3-201ENST00000262570 CAPN2P17655 700 aa18.76■□□□□ 0.59
CHCHD3-201ENST00000262570 PRPHP41219 470 aa18.76■□□□□ 0.59
CHCHD3-201ENST00000262570 KRT76Q01546 638 aa18.76■□□□□ 0.59
CHCHD3-201ENST00000262570 SP4Q02446 784 aa18.76■□□□□ 0.59
CHCHD3-201ENST00000262570 PTPAQ15257 358 aa18.76■□□□□ 0.59
CHCHD3-201ENST00000262570 BRDTQ58F21 947 aaPredicted RBP18.76■□□□□ 0.59
CHCHD3-201ENST00000262570 ATL3Q6DD88 541 aa18.76■□□□□ 0.59
CHCHD3-201ENST00000262570 ZNF746Q6NUN9 644 aaPredicted RBP18.76■□□□□ 0.59
CHCHD3-201ENST00000262570 SEPT1Q8WYJ6 367 aa18.76■□□□□ 0.59
CHCHD3-201ENST00000262570 TTC12Q9H892 705 aaPredicted RBP18.76■□□□□ 0.59
CHCHD3-201ENST00000262570 GSTTP1A0A1W2PQM5 241 aa18.76■□□□□ 0.59
CHCHD3-201ENST00000262570 ATG7O95352 703 aa18.76■□□□□ 0.59
CHCHD3-201ENST00000262570 NASPP49321 788 aaPredicted RBP18.76■□□□□ 0.59
CHCHD3-201ENST00000262570 ACTR2P61160 394 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms