RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 SND1Q7KZF4 910 aaKnown RBP eCLIP18.09■□□□□ 0.492e-7■■■■■ 28.3
TM9SF1-201ENST00000261789 ZNF713Q8N859 430 aaPredicted RBP18.09■□□□□ 0.49
TM9SF1-201ENST00000261789 TBC1D22AQ8WUA7 517 aa18.09■□□□□ 0.49
TM9SF1-201ENST00000261789 TLR10Q9BXR5 811 aa18.09■□□□□ 0.49
TM9SF1-201ENST00000261789 USP40Q9NVE5 1235 aa18.09■□□□□ 0.49
TM9SF1-201ENST00000261789 SHMT1P34896 483 aa18.08■□□□□ 0.49
TM9SF1-201ENST00000261789 FAM83BQ5T0W9 1011 aa18.08■□□□□ 0.49
TM9SF1-201ENST00000261789 LRRC31Q6UY01 552 aa18.08■□□□□ 0.49
TM9SF1-201ENST00000261789 ALS2CR12Q96Q35 445 aa18.08■□□□□ 0.49
TM9SF1-201ENST00000261789 LSM14BQ9BX40 385 aaKnown RBP18.08■□□□□ 0.49
TM9SF1-201ENST00000261789 PSMD2Q13200 908 aa18.08■□□□□ 0.48
TM9SF1-201ENST00000261789 DOK7Q18PE1 504 aa18.08■□□□□ 0.48
TM9SF1-201ENST00000261789 HERC4Q5GLZ8 1057 aaPredicted RBP18.08■□□□□ 0.48
TM9SF1-201ENST00000261789 CCDC181Q5TID7 509 aa18.08■□□□□ 0.48
TM9SF1-201ENST00000261789 KLHDC7AQ5VTJ3 777 aa18.08■□□□□ 0.48
TM9SF1-201ENST00000261789 ZFPM1Q8IX07 1006 aa18.08■□□□□ 0.48
TM9SF1-201ENST00000261789 MMGT1Q8N4V1 131 aa18.08■□□□□ 0.48
TM9SF1-201ENST00000261789 AFAP1L1Q8TED9 768 aa18.08■□□□□ 0.48
TM9SF1-201ENST00000261789 AENQ8WTP8 325 aaKnown RBP18.08■□□□□ 0.48
TM9SF1-201ENST00000261789 IQCDQ96DY2 449 aa18.08■□□□□ 0.48
TM9SF1-201ENST00000261789 SNAP25P60880 206 aa18.07■□□□□ 0.48
TM9SF1-201ENST00000261789 NFIAQ12857 509 aa18.07■□□□□ 0.48
TM9SF1-201ENST00000261789 IQCEQ6IPM2 695 aa18.07■□□□□ 0.48
TM9SF1-201ENST00000261789 POLD4Q9HCU8 107 aa18.07■□□□□ 0.48
TM9SF1-201ENST00000261789 RBM12Q9NTZ6 932 aaKnown RBP18.07■□□□□ 0.48
TM9SF1-201ENST00000261789 PODXL2Q9NZ53 605 aa18.07■□□□□ 0.48
TM9SF1-201ENST00000261789 PACSIN2Q9UNF0 486 aaPredicted RBP18.07■□□□□ 0.48
TM9SF1-201ENST00000261789 HYOU1Q9Y4L1 999 aa18.07■□□□□ 0.48
TM9SF1-201ENST00000261789 PLIN4Q96Q06 1357 aa18.07■□□□□ 0.48
TM9SF1-201ENST00000261789 ABCB11O95342 1321 aa18.07■□□□□ 0.48
TM9SF1-201ENST00000261789 ANKRD65E5RJM6 399 aa18.07■□□□□ 0.48
TM9SF1-201ENST00000261789 ZBTB5O15062 677 aa18.07■□□□□ 0.48
TM9SF1-201ENST00000261789 BBOX1O75936 387 aa18.07■□□□□ 0.48
TM9SF1-201ENST00000261789 MRPL12P52815 198 aaKnown RBP18.07■□□□□ 0.48
TM9SF1-201ENST00000261789 GPBP1Q86WP2 473 aa18.07■□□□□ 0.48
TM9SF1-201ENST00000261789 DNAAF5Q86Y56 855 aa18.07■□□□□ 0.48
TM9SF1-201ENST00000261789 CWC15Q9P013 229 aaKnown RBP18.07■□□□□ 0.48
TM9SF1-201ENST00000261789 FAM184BQ9ULE4 1060 aa18.07■□□□□ 0.48
TM9SF1-201ENST00000261789 FTCDO95954 541 aa18.06■□□□□ 0.48
TM9SF1-201ENST00000261789 PLA2G4BP0C869 781 aa18.06■□□□□ 0.48
TM9SF1-201ENST00000261789 CACNB3P54284 484 aa18.06■□□□□ 0.48
TM9SF1-201ENST00000261789 RNASE9P60153 205 aaKnown RBP18.06■□□□□ 0.48
TM9SF1-201ENST00000261789 C10orf67Q8IYJ2 551 aa18.06■□□□□ 0.48
TM9SF1-201ENST00000261789 SCFD1Q8WVM8 642 aa18.06■□□□□ 0.48
TM9SF1-201ENST00000261789 PCDHA2Q9Y5H9 948 aa18.06■□□□□ 0.48
TM9SF1-201ENST00000261789 GOLGA6BA6NDN3 693 aa18.06■□□□□ 0.48
TM9SF1-201ENST00000261789 TAL1P17542 331 aaPredicted RBP18.06■□□□□ 0.48
TM9SF1-201ENST00000261789 TCP1P17987 556 aaKnown RBP18.06■□□□□ 0.48
TM9SF1-201ENST00000261789 DDR1Q08345 913 aa18.06■□□□□ 0.48
TM9SF1-201ENST00000261789 SFMBT2Q5VUG0 894 aa18.06■□□□□ 0.48
TM9SF1-201ENST00000261789 HAUS3Q68CZ6 603 aa18.06■□□□□ 0.48
TM9SF1-201ENST00000261789 CCDC70Q6NSX1 233 aa18.06■□□□□ 0.48
TM9SF1-201ENST00000261789 GOLGA6L1Q8N7Z2 621 aa18.06■□□□□ 0.48
TM9SF1-201ENST00000261789 TBC1D5Q92609 795 aa18.06■□□□□ 0.48
TM9SF1-201ENST00000261789 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.06■□□□□ 0.48
TM9SF1-201ENST00000261789 PACSIN1Q9BY11 444 aa18.06■□□□□ 0.48
TM9SF1-201ENST00000261789 FEZ2Q9UHY8 353 aaPredicted RBP18.06■□□□□ 0.48
TM9SF1-201ENST00000261789 PCDHAC2Q9Y5I4 1007 aa18.06■□□□□ 0.48
TM9SF1-201ENST00000261789 POTEFA5A3E0 1075 aa18.05■□□□□ 0.48
TM9SF1-201ENST00000261789 ZSCAN5CA6NGD5 496 aaPredicted RBP18.05■□□□□ 0.48
TM9SF1-201ENST00000261789 MYO1CO00159 1063 aa18.05■□□□□ 0.48
TM9SF1-201ENST00000261789 MEIS1O00470 390 aa18.05■□□□□ 0.48
TM9SF1-201ENST00000261789 PJA2O43164 708 aa18.05■□□□□ 0.48
TM9SF1-201ENST00000261789 MED24O75448 989 aa18.05■□□□□ 0.48
TM9SF1-201ENST00000261789 POTEIP0CG38 1075 aa18.05■□□□□ 0.48
TM9SF1-201ENST00000261789 PRLRP16471 622 aa18.05■□□□□ 0.48
TM9SF1-201ENST00000261789 CASP5P51878 434 aa18.05■□□□□ 0.48
TM9SF1-201ENST00000261789 RAPGEF1Q13905 1077 aa18.05■□□□□ 0.48
TM9SF1-201ENST00000261789 SLC9C1Q4G0N8 1177 aa18.05■□□□□ 0.48
TM9SF1-201ENST00000261789 POTEGQ6S5H5 508 aa18.05■□□□□ 0.48
TM9SF1-201ENST00000261789 POTEEQ6S8J3 1075 aa18.05■□□□□ 0.48
TM9SF1-201ENST00000261789 PROM2Q8N271 834 aa18.05■□□□□ 0.48
TM9SF1-201ENST00000261789 FAM133AQ8N9E0 248 aa18.05■□□□□ 0.48
TM9SF1-201ENST00000261789 NOX5Q96PH1 765 aa18.05■□□□□ 0.48
TM9SF1-201ENST00000261789 LRRC27Q9C0I9 530 aa18.05■□□□□ 0.48
TM9SF1-201ENST00000261789 BMP2KQ9NSY1 1161 aaPredicted RBP18.05■□□□□ 0.48
TM9SF1-201ENST00000261789 CEP72Q9P209 647 aa18.05■□□□□ 0.48
TM9SF1-201ENST00000261789 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.05■□□□□ 0.48
TM9SF1-201ENST00000261789 LY75O60449 1722 aa18.05■□□□□ 0.48
TM9SF1-201ENST00000261789 PALMO75781 387 aa18.05■□□□□ 0.48
TM9SF1-201ENST00000261789 KLRC1P26715 233 aa18.05■□□□□ 0.48
TM9SF1-201ENST00000261789 TCP10Q12799 353 aa18.05■□□□□ 0.48
TM9SF1-201ENST00000261789 MAPK8IP2Q13387 824 aaPredicted RBP18.05■□□□□ 0.48
TM9SF1-201ENST00000261789 KCTD19Q17RG1 926 aaPredicted RBP18.05■□□□□ 0.48
TM9SF1-201ENST00000261789 TSEN2Q8NCE0 465 aaKnown RBP18.05■□□□□ 0.48
TM9SF1-201ENST00000261789 BCAS3Q9H6U6 928 aa18.05■□□□□ 0.48
TM9SF1-201ENST00000261789 TMEM51Q9NW97 253 aa18.05■□□□□ 0.48
TM9SF1-201ENST00000261789 ADAMTS1Q9UHI8 967 aa18.05■□□□□ 0.48
TM9SF1-201ENST00000261789 RSPH14Q9UHP6 348 aa18.05■□□□□ 0.48
TM9SF1-201ENST00000261789 TRPC5Q9UL62 973 aaPredicted RBP18.05■□□□□ 0.48
TM9SF1-201ENST00000261789 RRP15Q9Y3B9 282 aaKnown RBP18.05■□□□□ 0.48
TM9SF1-201ENST00000261789 A0A087X0T9 212 aa18.04■□□□□ 0.48
TM9SF1-201ENST00000261789 ESYT3A0FGR9 886 aa18.04■□□□□ 0.48
TM9SF1-201ENST00000261789 FAM228BP0C875 321 aa18.04■□□□□ 0.48
TM9SF1-201ENST00000261789 ACTN1P12814 892 aa18.04■□□□□ 0.48
TM9SF1-201ENST00000261789 CYP11B2P19099 503 aa18.04■□□□□ 0.48
TM9SF1-201ENST00000261789 PSMC6P62333 389 aa18.04■□□□□ 0.48
TM9SF1-201ENST00000261789 ADAM9Q13443 819 aa18.04■□□□□ 0.48
TM9SF1-201ENST00000261789 QRICH1Q2TAL8 776 aa18.04■□□□□ 0.48
TM9SF1-201ENST00000261789 ARSHQ5FYA8 562 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms