RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 DESP17661 470 aa17.65■□□□□ 0.42
SREBF1-201ENST00000261646 EZH2Q15910 746 aaKnown RBP17.65■□□□□ 0.42
SREBF1-201ENST00000261646 ANKARQ7Z5J8 1434 aa17.65■□□□□ 0.42
SREBF1-201ENST00000261646 PROCA1Q8NCQ7 364 aaPredicted RBP17.65■□□□□ 0.42
SREBF1-201ENST00000261646 PASKQ96RG2 1323 aa17.65■□□□□ 0.42
SREBF1-201ENST00000261646 GFPT2O94808 682 aa17.65■□□□□ 0.42
SREBF1-201ENST00000261646 CCHCR1Q8TD31 782 aa17.65■□□□□ 0.42
SREBF1-201ENST00000261646 GGT7Q9UJ14 662 aa17.65■□□□□ 0.42
SREBF1-201ENST00000261646 CPDO75976 1380 aa17.65■□□□□ 0.42
SREBF1-201ENST00000261646 A0A0U1RQJ8 604 aa17.65■□□□□ 0.42
SREBF1-201ENST00000261646 PPP1R3GB7ZBB8 358 aa17.65■□□□□ 0.42
SREBF1-201ENST00000261646 DAPK3O43293 454 aa17.65■□□□□ 0.42
SREBF1-201ENST00000261646 BAG2O95816 211 aa17.65■□□□□ 0.42
SREBF1-201ENST00000261646 IFNB1P01574 187 aa17.65■□□□□ 0.42
SREBF1-201ENST00000261646 ATP2A2P16615 1042 aaKnown RBP17.65■□□□□ 0.42
SREBF1-201ENST00000261646 PLCG2P16885 1265 aa17.65■□□□□ 0.42
SREBF1-201ENST00000261646 ZNF18P17022 549 aa17.65■□□□□ 0.42
SREBF1-201ENST00000261646 PDE6CP51160 858 aa17.65■□□□□ 0.42
SREBF1-201ENST00000261646 ATP2C1P98194 919 aaPredicted RBP17.65■□□□□ 0.42
SREBF1-201ENST00000261646 FAM98CQ17RN3 349 aaKnown RBP17.65■□□□□ 0.42
SREBF1-201ENST00000261646 FAM83BQ5T0W9 1011 aa17.65■□□□□ 0.42
SREBF1-201ENST00000261646 ENAHQ8N8S7 591 aaPredicted RBP17.65■□□□□ 0.42
SREBF1-201ENST00000261646 EYA3Q99504 573 aa17.65■□□□□ 0.42
SREBF1-201ENST00000261646 DNAJC17Q9NVM6 304 aaKnown RBP17.65■□□□□ 0.42
SREBF1-201ENST00000261646 TMEM131LA2VDJ0 1609 aa17.65■□□□□ 0.42
SREBF1-201ENST00000261646 NPHP4O75161 1426 aaPredicted RBP17.64■□□□□ 0.41
SREBF1-201ENST00000261646 GNPTABQ3T906 1256 aa17.64■□□□□ 0.41
SREBF1-201ENST00000261646 CAPRIN2Q6IMN6 1127 aaKnown RBP17.64■□□□□ 0.41
SREBF1-201ENST00000261646 ZNF449Q6P9G9 518 aa17.64■□□□□ 0.41
SREBF1-201ENST00000261646 NAP1L4Q99733 375 aaKnown RBP17.64■□□□□ 0.41
SREBF1-201ENST00000261646 CARD10Q9BWT7 1032 aa17.64■□□□□ 0.41
SREBF1-201ENST00000261646 FCER1AP12319 257 aa17.64■□□□□ 0.41
SREBF1-201ENST00000261646 SUSD4Q5VX71 490 aa17.64■□□□□ 0.41
SREBF1-201ENST00000261646 ANKRD40Q6AI12 368 aa17.64■□□□□ 0.41
SREBF1-201ENST00000261646 CYFIP2Q96F07 1278 aa17.64■□□□□ 0.41
SREBF1-201ENST00000261646 PKD2L1Q9P0L9 805 aa17.64■□□□□ 0.41
SREBF1-201ENST00000261646 AMACRQ9UHK6 382 aa17.64■□□□□ 0.41
SREBF1-201ENST00000261646 STAMBPO95630 424 aa17.64■□□□□ 0.41
SREBF1-201ENST00000261646 LRRC63Q05C16 580 aa17.64■□□□□ 0.41
SREBF1-201ENST00000261646 PHLDB3Q6NSJ2 640 aa17.64■□□□□ 0.41
SREBF1-201ENST00000261646 SCYL3Q8IZE3 742 aa17.64■□□□□ 0.41
SREBF1-201ENST00000261646 ADSSL1Q8N142 457 aa17.64■□□□□ 0.41
SREBF1-201ENST00000261646 HPS3Q969F9 1004 aa17.64■□□□□ 0.41
SREBF1-201ENST00000261646 KANSL2Q9H9L4 492 aa17.64■□□□□ 0.41
SREBF1-201ENST00000261646 ACSL3O95573 720 aa17.63■□□□□ 0.41
SREBF1-201ENST00000261646 FAM107AO95990 144 aa17.63■□□□□ 0.41
SREBF1-201ENST00000261646 SRGNP10124 158 aa17.63■□□□□ 0.41
SREBF1-201ENST00000261646 TSC22D3Q99576 134 aa17.63■□□□□ 0.41
SREBF1-201ENST00000261646 SYNCQ9H7C4 482 aa17.63■□□□□ 0.41
SREBF1-201ENST00000261646 PPP1R1BQ9UD71 204 aaPredicted RBP17.63■□□□□ 0.41
SREBF1-201ENST00000261646 FRMPD2Q68DX3 1309 aaPredicted RBP17.63■□□□□ 0.41
SREBF1-201ENST00000261646 POC1B-GALNT4F8VUJ3 575 aa17.63■□□□□ 0.41
SREBF1-201ENST00000261646 CRKLP46109 303 aaKnown RBP17.63■□□□□ 0.41
SREBF1-201ENST00000261646 KLK7P49862 253 aa17.63■□□□□ 0.41
SREBF1-201ENST00000261646 RPS8P62241 208 aaKnown RBP17.63■□□□□ 0.41
SREBF1-201ENST00000261646 IL9RQ01113 521 aa17.63■□□□□ 0.41
SREBF1-201ENST00000261646 PTGISQ16647 500 aa17.63■□□□□ 0.41
SREBF1-201ENST00000261646 C6orf118Q5T5N4 469 aa17.63■□□□□ 0.41
SREBF1-201ENST00000261646 LRRC8CQ8TDW0 803 aa17.63■□□□□ 0.41
SREBF1-201ENST00000261646 METTL14Q9HCE5 456 aaKnown RBP17.63■□□□□ 0.41
SREBF1-201ENST00000261646 TBX2Q13207 712 aaPredicted RBP17.63■□□□□ 0.41
SREBF1-201ENST00000261646 CYP4F22Q6NT55 531 aa17.63■□□□□ 0.41
SREBF1-201ENST00000261646 ZNF804AQ7Z570 1209 aa17.63■□□□□ 0.41
SREBF1-201ENST00000261646 SPATA24Q86W54 205 aa17.63■□□□□ 0.41
SREBF1-201ENST00000261646 KIFAP3Q92845 792 aa17.63■□□□□ 0.41
SREBF1-201ENST00000261646 VIRMAQ69YN4 1812 aaKnown RBP17.63■□□□□ 0.41
SREBF1-201ENST00000261646 ENO4A6NNW6 628 aa17.62■□□□□ 0.41
SREBF1-201ENST00000261646 GSG1L2A8MUP6 293 aa17.62■□□□□ 0.41
SREBF1-201ENST00000261646 PCP11498 1178 aaKnown RBP17.62■□□□□ 0.41
SREBF1-201ENST00000261646 DRP2Q13474 957 aa17.62■□□□□ 0.41
SREBF1-201ENST00000261646 MMGT1Q8N4V1 131 aa17.62■□□□□ 0.41
SREBF1-201ENST00000261646 ANKRD2Q9GZV1 360 aa17.62■□□□□ 0.41
SREBF1-201ENST00000261646 PXDNLA1KZ92 1463 aa17.62■□□□□ 0.41
SREBF1-201ENST00000261646 PREX1Q8TCU6 1659 aa17.62■□□□□ 0.41
SREBF1-201ENST00000261646 CYP4A11Q02928 519 aa17.62■□□□□ 0.41
SREBF1-201ENST00000261646 SNX1Q13596 522 aa17.62■□□□□ 0.41
SREBF1-201ENST00000261646 SLMAPQ14BN4 828 aa17.62■□□□□ 0.41
SREBF1-201ENST00000261646 MYCBPAPQ8TBZ2 947 aa17.62■□□□□ 0.41
SREBF1-201ENST00000261646 SEC16BQ96JE7 1060 aa17.62■□□□□ 0.41
SREBF1-201ENST00000261646 MAP3K14Q99558 947 aa17.62■□□□□ 0.41
SREBF1-201ENST00000261646 SH2D4AQ9H788 454 aa17.62■□□□□ 0.41
SREBF1-201ENST00000261646 TMOD2Q9NZR1 351 aa17.62■□□□□ 0.41
SREBF1-201ENST00000261646 STK17AQ9UEE5 414 aa17.62■□□□□ 0.41
SREBF1-201ENST00000261646 RTCBQ9Y3I0 505 aaKnown RBP17.62■□□□□ 0.41
SREBF1-201ENST00000261646 KDM3AQ9Y4C1 1321 aa17.62■□□□□ 0.41
SREBF1-201ENST00000261646 TCHHQ07283 1943 aa17.62■□□□□ 0.41
SREBF1-201ENST00000261646 LRRN2O75325 713 aa17.62■□□□□ 0.41
SREBF1-201ENST00000261646 PDHA1P08559 390 aa17.62■□□□□ 0.41
SREBF1-201ENST00000261646 LRRC14Q15048 493 aa17.62■□□□□ 0.41
SREBF1-201ENST00000261646 TXNRD1Q16881 649 aa17.62■□□□□ 0.41
SREBF1-201ENST00000261646 TEX2Q8IWB9 1127 aa17.62■□□□□ 0.41
SREBF1-201ENST00000261646 KIRREL3Q8IZU9 778 aa17.62■□□□□ 0.41
SREBF1-201ENST00000261646 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.62■□□□□ 0.415e-8■■□□□ 12.5
SREBF1-201ENST00000261646 CFAP61Q8NHU2 1237 aa17.62■□□□□ 0.41
SREBF1-201ENST00000261646 SGSM3Q96HU1 749 aa17.62■□□□□ 0.41
SREBF1-201ENST00000261646 LOC102724428A0A0B4J2F2 783 aa17.61■□□□□ 0.41
SREBF1-201ENST00000261646 SART1O43290 800 aaKnown RBP17.61■□□□□ 0.41
SREBF1-201ENST00000261646 AFPP02771 609 aaKnown RBP17.61■□□□□ 0.41
SREBF1-201ENST00000261646 FERP16591 822 aa17.61■□□□□ 0.41
SREBF1-201ENST00000261646 SIK1P57059 783 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms