RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 PRPF40AO75400 957 aaKnown RBP23.4■■□□□ 1.34
RTCA-201ENST00000260563 KCNA2P16389 499 aa23.4■■□□□ 1.34
RTCA-201ENST00000260563 MCM7P33993 719 aa23.4■■□□□ 1.34
RTCA-201ENST00000260563 NEDD9Q14511 834 aa23.4■■□□□ 1.34
RTCA-201ENST00000260563 GJC2Q5T442 439 aaPredicted RBP23.4■■□□□ 1.34
RTCA-201ENST00000260563 POTEDQ86YR6 584 aa23.4■■□□□ 1.34
RTCA-201ENST00000260563 GIMAP8Q8ND71 665 aaPredicted RBP23.4■■□□□ 1.34
RTCA-201ENST00000260563 COPS5Q92905 334 aa23.4■■□□□ 1.34
RTCA-201ENST00000260563 DEFB118Q96PH6 123 aa23.4■■□□□ 1.34
RTCA-201ENST00000260563 SENP7Q9BQF6 1050 aa23.4■■□□□ 1.34
RTCA-201ENST00000260563 ZNF577Q9BSK1 485 aa23.4■■□□□ 1.34
RTCA-201ENST00000260563 XPNPEP3Q9NQH7 507 aa23.4■■□□□ 1.34
RTCA-201ENST00000260563 WDR81Q562E7 1941 aa23.4■■□□□ 1.34
RTCA-201ENST00000260563 SYNRGQ9UMZ2 1314 aa23.4■■□□□ 1.34
RTCA-201ENST00000260563 NEMFO60524 1076 aa23.39■■□□□ 1.34
RTCA-201ENST00000260563 GGPS1O95749 300 aa23.39■■□□□ 1.34
RTCA-201ENST00000260563 GH1P01241 217 aa23.39■■□□□ 1.34
RTCA-201ENST00000260563 SP2Q02086 613 aa23.39■■□□□ 1.34
RTCA-201ENST00000260563 SLC39A14Q15043 492 aa23.39■■□□□ 1.34
RTCA-201ENST00000260563 PTPAQ15257 358 aa23.39■■□□□ 1.34
RTCA-201ENST00000260563 ZNF174Q15697 407 aa23.39■■□□□ 1.34
RTCA-201ENST00000260563 OR6J1Q8NGC5 347 aa23.39■■□□□ 1.34
RTCA-201ENST00000260563 KCNG4Q8TDN1 519 aa23.39■■□□□ 1.34
RTCA-201ENST00000260563 TMEM106CQ9BVX2 250 aa23.39■■□□□ 1.34
RTCA-201ENST00000260563 Q9Y3F1 56 aa23.39■■□□□ 1.34
RTCA-201ENST00000260563 IPO5O00410 1097 aaKnown RBP23.38■■□□□ 1.33
RTCA-201ENST00000260563 MSH4O15457 936 aa23.38■■□□□ 1.33
RTCA-201ENST00000260563 ATP9AO75110 1047 aa23.38■■□□□ 1.33
RTCA-201ENST00000260563 BMP15O95972 392 aa23.38■■□□□ 1.33
RTCA-201ENST00000260563 PTGS1P23219 599 aa23.38■■□□□ 1.33
RTCA-201ENST00000260563 SDF4Q9BRK5 362 aa23.38■■□□□ 1.33
RTCA-201ENST00000260563 SPC25Q9HBM1 224 aa23.38■■□□□ 1.33
RTCA-201ENST00000260563 LMBRD1Q9NUN5 540 aa23.38■■□□□ 1.33
RTCA-201ENST00000260563 NFASCO94856 1347 aa23.38■■□□□ 1.33
RTCA-201ENST00000260563 SPTLC2O15270 562 aa23.38■■□□□ 1.33
RTCA-201ENST00000260563 SORBS3O60504 671 aa23.38■■□□□ 1.33
RTCA-201ENST00000260563 GJB1P08034 283 aa23.38■■□□□ 1.33
RTCA-201ENST00000260563 PTMSP20962 102 aa23.38■■□□□ 1.33
RTCA-201ENST00000260563 CELF3Q5SZQ8 465 aaKnown RBP23.38■■□□□ 1.33
RTCA-201ENST00000260563 LHX8Q68G74 356 aa23.38■■□□□ 1.33
RTCA-201ENST00000260563 CYFIP1Q7L576 1253 aa23.38■■□□□ 1.33
RTCA-201ENST00000260563 DHX37Q8IY37 1157 aaKnown RBP23.38■■□□□ 1.33
RTCA-201ENST00000260563 TNS4Q8IZW8 715 aa23.38■■□□□ 1.33
RTCA-201ENST00000260563 AP5M1Q9H0R1 490 aa23.38■■□□□ 1.33
RTCA-201ENST00000260563 MLXIPQ9HAP2 919 aa23.38■■□□□ 1.33
RTCA-201ENST00000260563 DYNC1LI2O43237 492 aaPredicted RBP23.37■■□□□ 1.33
RTCA-201ENST00000260563 PPP6R2O75170 966 aa23.37■■□□□ 1.33
RTCA-201ENST00000260563 FARP2O94887 1054 aaPredicted RBP23.37■■□□□ 1.33
RTCA-201ENST00000260563 ARHGAP1Q07960 439 aa23.37■■□□□ 1.33
RTCA-201ENST00000260563 ITGB3BPQ13352 177 aaPredicted RBP23.37■■□□□ 1.33
RTCA-201ENST00000260563 CALCRLQ16602 461 aa23.37■■□□□ 1.33
RTCA-201ENST00000260563 METTL7BQ6UX53 244 aa23.37■■□□□ 1.33
RTCA-201ENST00000260563 ETNPPLQ8TBG4 499 aa23.37■■□□□ 1.33
RTCA-201ENST00000260563 U2AF1L4Q8WU68 220 aaKnown RBP23.37■■□□□ 1.33
RTCA-201ENST00000260563 EMID1Q96A84 441 aaPredicted RBP23.37■■□□□ 1.33
RTCA-201ENST00000260563 UIMC1Q96RL1 719 aa23.37■■□□□ 1.33
RTCA-201ENST00000260563 KCNMB3Q9NPA1 279 aa23.37■■□□□ 1.33
RTCA-201ENST00000260563 TBX3O15119 743 aa23.36■■□□□ 1.33
RTCA-201ENST00000260563 MARCH6O60337 910 aa23.36■■□□□ 1.33
RTCA-201ENST00000260563 PGK1P00558 417 aa23.36■■□□□ 1.33
RTCA-201ENST00000260563 C6orf222P0C671 652 aaPredicted RBP23.36■■□□□ 1.33
RTCA-201ENST00000260563 GJA9P57773 515 aa23.36■■□□□ 1.33
RTCA-201ENST00000260563 LAMC2Q13753 1193 aa23.36■■□□□ 1.33
RTCA-201ENST00000260563 SLC5A5Q92911 643 aa23.36■■□□□ 1.33
RTCA-201ENST00000260563 ABHD8Q96I13 439 aa23.36■■□□□ 1.33
RTCA-201ENST00000260563 UPF3AQ9H1J1 476 aaKnown RBP23.36■■□□□ 1.33
RTCA-201ENST00000260563 JPH1Q9HDC5 661 aaPredicted RBP23.36■■□□□ 1.33
RTCA-201ENST00000260563 TBC1D22BQ9NU19 505 aa23.36■■□□□ 1.33
RTCA-201ENST00000260563 TCEAL9Q9UHQ7 104 aa23.36■■□□□ 1.33
RTCA-201ENST00000260563 MORC2Q9Y6X9 1032 aaPredicted RBP23.36■■□□□ 1.33
RTCA-201ENST00000260563 KIAA0100Q14667 2235 aaKnown RBP23.36■■□□□ 1.33
RTCA-201ENST00000260563 DDX39AO00148 427 aaKnown RBP23.35■■□□□ 1.33
RTCA-201ENST00000260563 ADAMTS4O75173 837 aa23.35■■□□□ 1.33
RTCA-201ENST00000260563 LRCH2Q5VUJ6 765 aa23.35■■□□□ 1.33
RTCA-201ENST00000260563 FAM20AQ96MK3 541 aa23.35■■□□□ 1.33
RTCA-201ENST00000260563 SPATA33Q96N06 139 aa23.35■■□□□ 1.33
RTCA-201ENST00000260563 NOP56O00567 594 aaKnown RBP23.34■■□□□ 1.33
RTCA-201ENST00000260563 GAS7O60861 476 aa23.34■■□□□ 1.33
RTCA-201ENST00000260563 SGPL1O95470 568 aa23.34■■□□□ 1.33
RTCA-201ENST00000260563 MARCKSP29966 332 aaPredicted RBP23.34■■□□□ 1.33
RTCA-201ENST00000260563 ME1P48163 572 aa23.34■■□□□ 1.33
RTCA-201ENST00000260563 GJA8P48165 433 aa23.34■■□□□ 1.33
RTCA-201ENST00000260563 CPT1AP50416 773 aa23.34■■□□□ 1.33
RTCA-201ENST00000260563 ATP2C1P98194 919 aaPredicted RBP23.34■■□□□ 1.33
RTCA-201ENST00000260563 PTGDRQ13258 359 aa23.34■■□□□ 1.33
RTCA-201ENST00000260563 BRDTQ58F21 947 aaPredicted RBP23.34■■□□□ 1.33
RTCA-201ENST00000260563 RNF180Q86T96 592 aa23.34■■□□□ 1.33
RTCA-201ENST00000260563 SLFN12Q8IYM2 578 aa23.34■■□□□ 1.33
RTCA-201ENST00000260563 RIT2Q99578 217 aa23.34■■□□□ 1.33
RTCA-201ENST00000260563 TEKT3Q9BXF9 490 aa23.34■■□□□ 1.33
RTCA-201ENST00000260563 SLC9A2Q9UBY0 812 aa23.34■■□□□ 1.33
RTCA-201ENST00000260563 OGDHLQ9ULD0 1010 aa23.34■■□□□ 1.33
RTCA-201ENST00000260563 MYH9P35579 1960 aaKnown RBP23.34■■□□□ 1.33
RTCA-201ENST00000260563 GADD45BO75293 160 aaPredicted RBP23.33■■□□□ 1.33
RTCA-201ENST00000260563 MYCNP04198 464 aaPredicted RBP23.33■■□□□ 1.33
RTCA-201ENST00000260563 SP4Q02446 784 aa23.33■■□□□ 1.33
RTCA-201ENST00000260563 FSCN1Q16658 493 aaKnown RBP23.33■■□□□ 1.33
RTCA-201ENST00000260563 PPTC7Q8NI37 304 aa23.33■■□□□ 1.33
RTCA-201ENST00000260563 GJA10Q969M2 543 aa23.33■■□□□ 1.33
RTCA-201ENST00000260563 CRISPLD2Q9H0B8 497 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms