RNA–Protein interactions for RNA: ENST00000256362.4

VRTN-201, Transcript of vertebrae development associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRTN, Length 3,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-201ENST00000256362 TMEM47Q9BQJ4 181 aa12.79□□□□□ -0.36
VRTN-201ENST00000256362 ARHGAP20Q9P2F6 1191 aa12.79□□□□□ -0.36
VRTN-201ENST00000256362 DDX20Q9UHI6 824 aaKnown RBP12.79□□□□□ -0.36
VRTN-201ENST00000256362 MAD2L2Q9UI95 211 aa12.79□□□□□ -0.36
VRTN-201ENST00000256362 ATP8A1Q9Y2Q0 1164 aa12.79□□□□□ -0.36
VRTN-201ENST00000256362 ZNF804BA4D1E1 1349 aa12.79□□□□□ -0.36
VRTN-201ENST00000256362 TARSL2A2RTX5 802 aaKnown RBP12.79□□□□□ -0.36
VRTN-201ENST00000256362 PALMO75781 387 aa12.79□□□□□ -0.36
VRTN-201ENST00000256362 OR52Z1P0C646 297 aa12.79□□□□□ -0.36
VRTN-201ENST00000256362 ZKSCAN8Q15776 578 aaPredicted RBP12.79□□□□□ -0.36
VRTN-201ENST00000256362 SOGA3Q5TF21 947 aa12.79□□□□□ -0.36
VRTN-201ENST00000256362 ARL6IP4Q66PJ3 421 aaKnown RBP12.79□□□□□ -0.36
VRTN-201ENST00000256362 HAUS3Q68CZ6 603 aa12.79□□□□□ -0.36
VRTN-201ENST00000256362 EMBQ6PCB8 327 aa12.79□□□□□ -0.36
VRTN-201ENST00000256362 KIAA0895Q8NCT3 520 aa12.79□□□□□ -0.36
VRTN-201ENST00000256362 PIGSQ96S52 555 aa12.79□□□□□ -0.36
VRTN-201ENST00000256362 SEMA6BQ9H3T3 888 aa12.79□□□□□ -0.36
VRTN-201ENST00000256362 THAP9Q9H5L6 903 aa12.79□□□□□ -0.36
VRTN-201ENST00000256362 BSDC1Q9NW68 430 aaPredicted RBP12.79□□□□□ -0.36
VRTN-201ENST00000256362 SALL4Q9UJQ4 1053 aa12.79□□□□□ -0.36
VRTN-201ENST00000256362 ZNF233A6NK53 670 aa12.78□□□□□ -0.36
VRTN-201ENST00000256362 KIF1CO43896 1103 aaKnown RBP12.78□□□□□ -0.36
VRTN-201ENST00000256362 TNNI2P48788 182 aa12.78□□□□□ -0.36
VRTN-201ENST00000256362 ZBED6P86452 979 aa12.78□□□□□ -0.36
VRTN-201ENST00000256362 FMNL3Q8IVF7 1028 aa12.78□□□□□ -0.36
VRTN-201ENST00000256362 KIF2BQ8N4N8 673 aa12.78□□□□□ -0.36
VRTN-201ENST00000256362 CCDC63Q8NA47 563 aa12.78□□□□□ -0.36
VRTN-201ENST00000256362 PAIP2Q9BPZ3 127 aaKnown RBP12.78□□□□□ -0.36
VRTN-201ENST00000256362 ELAC2Q9BQ52 826 aaKnown RBP12.78□□□□□ -0.36
VRTN-201ENST00000256362 DDX47Q9H0S4 455 aaKnown RBP12.78□□□□□ -0.36
VRTN-201ENST00000256362 ZNF652Q9Y2D9 606 aa12.78□□□□□ -0.36
VRTN-201ENST00000256362 F8W031 263 aaPredicted RBP12.78□□□□□ -0.36
VRTN-201ENST00000256362 STXBP3O00186 592 aa12.78□□□□□ -0.36
VRTN-201ENST00000256362 CCNE1P24864 410 aa12.78□□□□□ -0.36
VRTN-201ENST00000256362 SATB1Q01826 763 aa12.78□□□□□ -0.36
VRTN-201ENST00000256362 KIAA0753Q2KHM9 967 aa12.78□□□□□ -0.36
VRTN-201ENST00000256362 TCERG1LQ5VWI1 586 aa12.78□□□□□ -0.36
VRTN-201ENST00000256362 ALS2CLQ60I27 953 aa12.78□□□□□ -0.36
VRTN-201ENST00000256362 CREG2Q8IUH2 290 aa12.78□□□□□ -0.36
VRTN-201ENST00000256362 ATP6V1G3Q96LB4 118 aa12.78□□□□□ -0.36
VRTN-201ENST00000256362 ARPP21Q9UBL0 812 aaPredicted RBP12.78□□□□□ -0.36
VRTN-201ENST00000256362 GMNCA6NCL1 334 aa12.78□□□□□ -0.36
VRTN-201ENST00000256362 RHOBTB3O94955 611 aa12.78□□□□□ -0.36
VRTN-201ENST00000256362 TDP2O95551 362 aa12.78□□□□□ -0.36
VRTN-201ENST00000256362 SLURP2P0DP57 97 aa12.78□□□□□ -0.36
VRTN-201ENST00000256362 FECHP22830 423 aa12.78□□□□□ -0.36
VRTN-201ENST00000256362 PICALMQ13492 652 aa12.78□□□□□ -0.36
VRTN-201ENST00000256362 QPCTQ16769 361 aa12.78□□□□□ -0.36
VRTN-201ENST00000256362 MIIPQ5JXC2 388 aa12.78□□□□□ -0.36
VRTN-201ENST00000256362 PAPD7Q5XG87 772 aaKnown RBP12.78□□□□□ -0.36
VRTN-201ENST00000256362 LRRC47Q8N1G4 583 aaKnown RBP12.78□□□□□ -0.36
VRTN-201ENST00000256362 NSMCE1Q8WV22 266 aa12.78□□□□□ -0.36
VRTN-201ENST00000256362 NUDT12Q9BQG2 462 aa12.78□□□□□ -0.36
VRTN-201ENST00000256362 MTA3Q9BTC8 594 aa12.78□□□□□ -0.36
VRTN-201ENST00000256362 GPCPD1Q9NPB8 672 aa12.78□□□□□ -0.36
VRTN-201ENST00000256362 KBTBD4Q9NVX7 518 aa12.78□□□□□ -0.36
VRTN-201ENST00000256362 ORC4O43929 436 aa12.77□□□□□ -0.36
VRTN-201ENST00000256362 LDHBP07195 334 aaKnown RBP12.77□□□□□ -0.36
VRTN-201ENST00000256362 TSGA10Q9BZW7 698 aa12.77□□□□□ -0.36
VRTN-201ENST00000256362 VCPKMTQ9H867 229 aa12.77□□□□□ -0.36
VRTN-201ENST00000256362 CPSF2Q9P2I0 782 aaKnown RBP12.77□□□□□ -0.36
VRTN-201ENST00000256362 DUOX1Q9NRD9 1551 aa12.77□□□□□ -0.37
VRTN-201ENST00000256362 GCFC2P16383 781 aaKnown RBP12.77□□□□□ -0.37
VRTN-201ENST00000256362 GSCP56915 257 aaPredicted RBP12.77□□□□□ -0.37
VRTN-201ENST00000256362 DHX9Q08211 1270 aaKnown RBP12.77□□□□□ -0.37
VRTN-201ENST00000256362 NONOQ15233 471 aaKnown RBP eCLIP12.77□□□□□ -0.37
VRTN-201ENST00000256362 SPRED3Q2MJR0 410 aa12.77□□□□□ -0.37
VRTN-201ENST00000256362 GNPTABQ3T906 1256 aa12.77□□□□□ -0.37
VRTN-201ENST00000256362 CCDC38Q502W7 563 aa12.77□□□□□ -0.37
VRTN-201ENST00000256362 CALML4Q96GE6 196 aa12.77□□□□□ -0.37
VRTN-201ENST00000256362 PYM1Q9BRP8 204 aaKnown RBP12.77□□□□□ -0.37
VRTN-201ENST00000256362 NDST4Q9H3R1 872 aa12.77□□□□□ -0.37
VRTN-201ENST00000256362 ATP8A2Q9NTI2 1148 aa12.77□□□□□ -0.37
VRTN-201ENST00000256362 SEC63Q9UGP8 760 aaKnown RBP12.77□□□□□ -0.37
VRTN-201ENST00000256362 ADAMTS1Q9UHI8 967 aa12.77□□□□□ -0.37
VRTN-201ENST00000256362 ABCA3Q99758 1704 aa12.77□□□□□ -0.37
VRTN-201ENST00000256362 MYMKA6NI61 221 aa12.76□□□□□ -0.37
VRTN-201ENST00000256362 LGR5O75473 907 aa12.76□□□□□ -0.37
VRTN-201ENST00000256362 CLSTN1O94985 981 aa12.76□□□□□ -0.37
VRTN-201ENST00000256362 POLR2FP61218 127 aaKnown RBP12.76□□□□□ -0.37
VRTN-201ENST00000256362 TNNC1P63316 161 aa12.76□□□□□ -0.37
VRTN-201ENST00000256362 UBE2SQ16763 222 aa12.76□□□□□ -0.37
VRTN-201ENST00000256362 DAAM2Q86T65 1068 aa12.76□□□□□ -0.37
VRTN-201ENST00000256362 ANKRD42Q8N9B4 389 aa12.76□□□□□ -0.37
VRTN-201ENST00000256362 GOLGA6L10A0A0M3HER8 536 aa12.76□□□□□ -0.37
VRTN-201ENST00000256362 A0A1W2PQC6 194 aa12.76□□□□□ -0.37
VRTN-201ENST00000256362 DIAPH2O60879 1101 aa12.76□□□□□ -0.37
VRTN-201ENST00000256362 KRT13P13646 458 aa12.76□□□□□ -0.37
VRTN-201ENST00000256362 COPB2P35606 906 aa12.76□□□□□ -0.37
VRTN-201ENST00000256362 OTUD6AQ7L8S5 288 aa12.76□□□□□ -0.37
VRTN-201ENST00000256362 FNBP4Q8N3X1 1017 aaPredicted RBP12.76□□□□□ -0.37
VRTN-201ENST00000256362 CASKIN2Q8WXE0 1202 aa12.76□□□□□ -0.37
VRTN-201ENST00000256362 TBC1D5Q92609 795 aa12.76□□□□□ -0.37
VRTN-201ENST00000256362 SEC16BQ96JE7 1060 aa12.76□□□□□ -0.37
VRTN-201ENST00000256362 BARHL2Q9NY43 387 aa12.76□□□□□ -0.37
VRTN-201ENST00000256362 BICDL2A1A5D9 508 aa12.76□□□□□ -0.37
VRTN-201ENST00000256362 LRRC14Q15048 493 aa12.76□□□□□ -0.37
VRTN-201ENST00000256362 ANKS4BQ8N8V4 417 aa12.76□□□□□ -0.37
VRTN-201ENST00000256362 PPP1R12CQ9BZL4 782 aa12.76□□□□□ -0.37
VRTN-201ENST00000256362 TMEM110-MUSTN1A8MSY1 372 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms