RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 GRAPLQ8TC17 118 aaPredicted RBP12.64□□□□□ -0.39
SOX9-201ENST00000245479 MTRQ99707 1265 aa12.64□□□□□ -0.39
SOX9-201ENST00000245479 CD248Q9HCU0 757 aa12.64□□□□□ -0.39
SOX9-201ENST00000245479 DDX25Q9UHL0 483 aaKnown RBP12.64□□□□□ -0.39
SOX9-201ENST00000245479 STIM2Q9P246 746 aa12.64□□□□□ -0.39
SOX9-201ENST00000245479 POLLQ9UGP5 575 aa12.64□□□□□ -0.39
SOX9-201ENST00000245479 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.64□□□□□ -0.39
SOX9-201ENST00000245479 SLC37A4O43826 429 aa12.64□□□□□ -0.39
SOX9-201ENST00000245479 SEPT2Q15019 361 aa12.64□□□□□ -0.39
SOX9-201ENST00000245479 SLC9C1Q4G0N8 1177 aa12.64□□□□□ -0.39
SOX9-201ENST00000245479 RCSD1Q6JBY9 416 aa12.64□□□□□ -0.39
SOX9-201ENST00000245479 EP400NLQ6ZTU2 488 aa12.64□□□□□ -0.39
SOX9-201ENST00000245479 ZFPM1Q8IX07 1006 aa12.64□□□□□ -0.39
SOX9-201ENST00000245479 MSANTD4Q8NCY6 345 aa12.64□□□□□ -0.39
SOX9-201ENST00000245479 CTNNBL1Q8WYA6 563 aaPredicted RBP12.64□□□□□ -0.39
SOX9-201ENST00000245479 ADAMTS1Q9UHI8 967 aa12.64□□□□□ -0.39
SOX9-201ENST00000245479 SERPINB13Q9UIV8 391 aa12.64□□□□□ -0.39
SOX9-201ENST00000245479 POTEFA5A3E0 1075 aa12.63□□□□□ -0.39
SOX9-201ENST00000245479 POTEIP0CG38 1075 aa12.63□□□□□ -0.39
SOX9-201ENST00000245479 GJC1P36383 396 aa12.63□□□□□ -0.39
SOX9-201ENST00000245479 EIF4A3P38919 411 aaKnown RBP12.63□□□□□ -0.39
SOX9-201ENST00000245479 GFPT1Q06210 699 aaPredicted RBP12.63□□□□□ -0.39
SOX9-201ENST00000245479 RPS6KA1Q15418 735 aa12.63□□□□□ -0.39
SOX9-201ENST00000245479 POTEGQ6S5H5 508 aa12.63□□□□□ -0.39
SOX9-201ENST00000245479 POTEEQ6S8J3 1075 aa12.63□□□□□ -0.39
SOX9-201ENST00000245479 DDX12PQ92771 950 aa12.63□□□□□ -0.39
SOX9-201ENST00000245479 QTRT2Q9H974 415 aaKnown RBP12.63□□□□□ -0.39
SOX9-201ENST00000245479 TSKSQ9UJT2 592 aa12.63□□□□□ -0.39
SOX9-201ENST00000245479 PRPF6O94906 941 aaKnown RBP12.63□□□□□ -0.39
SOX9-201ENST00000245479 CYP2J2P51589 502 aa12.63□□□□□ -0.39
SOX9-201ENST00000245479 EHHADHQ08426 723 aa12.63□□□□□ -0.39
SOX9-201ENST00000245479 ZKSCAN8Q15776 578 aaPredicted RBP12.63□□□□□ -0.39
SOX9-201ENST00000245479 LSM14BQ9BX40 385 aaKnown RBP12.63□□□□□ -0.39
SOX9-201ENST00000245479 LACRTQ9GZZ8 138 aa12.63□□□□□ -0.39
SOX9-201ENST00000245479 STMN4Q9H169 189 aaPredicted RBP12.63□□□□□ -0.39
SOX9-201ENST00000245479 NHEJ1Q9H9Q4 299 aaPredicted RBP12.63□□□□□ -0.39
SOX9-201ENST00000245479 KCNK3O14649 394 aa12.63□□□□□ -0.39
SOX9-201ENST00000245479 MAP2K7O14733 419 aa12.63□□□□□ -0.39
SOX9-201ENST00000245479 GCNT3O95395 438 aa12.63□□□□□ -0.39
SOX9-201ENST00000245479 MMP10P09238 476 aa12.63□□□□□ -0.39
SOX9-201ENST00000245479 MDM2Q00987 491 aaPredicted RBP12.63□□□□□ -0.39
SOX9-201ENST00000245479 DAAM2Q86T65 1068 aa12.63□□□□□ -0.39
SOX9-201ENST00000245479 LARP4BQ92615 738 aaKnown RBP12.63□□□□□ -0.39
SOX9-201ENST00000245479 P2RX5Q93086 422 aa12.63□□□□□ -0.39
SOX9-201ENST00000245479 A0A1W2PRG0 241 aa12.62□□□□□ -0.39
SOX9-201ENST00000245479 FANCGO15287 622 aa12.62□□□□□ -0.39
SOX9-201ENST00000245479 SF3B3Q15393 1217 aaKnown RBP12.62□□□□□ -0.39
SOX9-201ENST00000245479 CLEC4GQ6UXB4 293 aa12.62□□□□□ -0.39
SOX9-201ENST00000245479 KRT25Q7Z3Z0 450 aa12.62□□□□□ -0.39
SOX9-201ENST00000245479 HOOK3Q86VS8 718 aa12.62□□□□□ -0.39
SOX9-201ENST00000245479 MB21D1Q8N884 522 aa12.62□□□□□ -0.39
SOX9-201ENST00000245479 FAM133AQ8N9E0 248 aa12.62□□□□□ -0.39
SOX9-201ENST00000245479 MS4A14Q96JA4 679 aa12.62□□□□□ -0.39
SOX9-201ENST00000245479 MAD2L2Q9UI95 211 aa12.62□□□□□ -0.39
SOX9-201ENST00000245479 LONP1P36776 959 aaKnown RBP12.62□□□□□ -0.39
SOX9-201ENST00000245479 IFNAR2P48551 515 aa12.62□□□□□ -0.39
SOX9-201ENST00000245479 MTMR3Q13615 1198 aa12.62□□□□□ -0.39
SOX9-201ENST00000245479 CCDC197Q8NCU1 140 aa12.62□□□□□ -0.39
SOX9-201ENST00000245479 CDCA7Q9BWT1 371 aaPredicted RBP12.62□□□□□ -0.39
SOX9-201ENST00000245479 IKZF4Q9H2S9 585 aa12.62□□□□□ -0.39
SOX9-201ENST00000245479 KCND1Q9NSA2 647 aa12.62□□□□□ -0.39
SOX9-201ENST00000245479 UTP11Q9Y3A2 253 aaKnown RBP12.62□□□□□ -0.39
SOX9-201ENST00000245479 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.62□□□□□ -0.39
SOX9-201ENST00000245479 TNS2Q63HR2 1409 aa12.62□□□□□ -0.39
SOX9-201ENST00000245479 A0A1B0GTH6 734 aa12.62□□□□□ -0.39
SOX9-201ENST00000245479 MYO1EQ12965 1108 aa12.62□□□□□ -0.39
SOX9-201ENST00000245479 NFRKBQ6P4R8 1299 aa12.62□□□□□ -0.39
SOX9-201ENST00000245479 CCNI2Q6ZMN8 369 aaPredicted RBP12.62□□□□□ -0.39
SOX9-201ENST00000245479 INTS8Q75QN2 995 aaKnown RBP12.62□□□□□ -0.39
SOX9-201ENST00000245479 MGARPQ8TDB4 240 aa12.62□□□□□ -0.39
SOX9-201ENST00000245479 LMBR1Q8WVP7 490 aa12.62□□□□□ -0.39
SOX9-201ENST00000245479 DPH5Q9H2P9 285 aa12.62□□□□□ -0.39
SOX9-201ENST00000245479 PANK4Q9NVE7 773 aa12.62□□□□□ -0.39
SOX9-201ENST00000245479 RASAL2Q9UJF2 1139 aa12.62□□□□□ -0.39
SOX9-201ENST00000245479 STK36Q9NRP7 1315 aa12.62□□□□□ -0.39
SOX9-201ENST00000245479 CTNND1O60716 968 aaKnown RBP12.61□□□□□ -0.39
SOX9-201ENST00000245479 TBCAO75347 108 aaKnown RBP12.61□□□□□ -0.39
SOX9-201ENST00000245479 MRPL12P52815 198 aaKnown RBP12.61□□□□□ -0.39
SOX9-201ENST00000245479 CTTNQ14247 550 aaKnown RBP12.61□□□□□ -0.39
SOX9-201ENST00000245479 CERKLQ49MI3 558 aaPredicted RBP12.61□□□□□ -0.39
SOX9-201ENST00000245479 SLFN13Q68D06 897 aa12.61□□□□□ -0.39
SOX9-201ENST00000245479 TBC1D1Q86TI0 1168 aaPredicted RBP12.61□□□□□ -0.39
SOX9-201ENST00000245479 SUGP1Q8IWZ8 645 aaKnown RBP12.61□□□□□ -0.39
SOX9-201ENST00000245479 SPDL1Q96EA4 605 aa12.61□□□□□ -0.39
SOX9-201ENST00000245479 TRIM7Q9C029 511 aa12.61□□□□□ -0.39
SOX9-201ENST00000245479 DONSONQ9NYP3 566 aa12.61□□□□□ -0.39
SOX9-201ENST00000245479 RGL1Q9NZL6 768 aa12.61□□□□□ -0.39
SOX9-201ENST00000245479 ZBTB12Q9Y330 459 aaPredicted RBP12.61□□□□□ -0.39
SOX9-201ENST00000245479 HIP1RO75146 1068 aa12.61□□□□□ -0.39
SOX9-201ENST00000245479 ACTN1P12814 892 aa12.61□□□□□ -0.39
SOX9-201ENST00000245479 WDR78Q5VTH9 848 aa12.61□□□□□ -0.39
SOX9-201ENST00000245479 NLRP14Q86W24 1093 aa12.61□□□□□ -0.39
SOX9-201ENST00000245479 VSIG1Q86XK7 387 aa12.61□□□□□ -0.39
SOX9-201ENST00000245479 PARP9Q8IXQ6 854 aa12.61□□□□□ -0.39
SOX9-201ENST00000245479 MTRF1LQ9UGC7 380 aaKnown RBP12.61□□□□□ -0.39
SOX9-201ENST00000245479 NOVA2Q9UNW9 492 aaKnown RBP12.61□□□□□ -0.39
SOX9-201ENST00000245479 LRRN2O75325 713 aa12.61□□□□□ -0.39
SOX9-201ENST00000245479 KRT14P02533 472 aa12.61□□□□□ -0.39
SOX9-201ENST00000245479 HARSP12081 509 aaKnown RBP12.61□□□□□ -0.39
SOX9-201ENST00000245479 SETDB1Q15047 1291 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms