RNA–Protein interactions for RNA: ENST00000242059.9

SCRN1-201, Transcript of secernin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCRN1, Length 5,257 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-201ENST00000242059 VPS33BQ9H267 617 aa10.46□□□□□ -0.73
SCRN1-201ENST00000242059 hCG_1642624A0A1W2PR95 340 aa10.46□□□□□ -0.73
SCRN1-201ENST00000242059 KPNA6O60684 536 aa10.46□□□□□ -0.73
SCRN1-201ENST00000242059 HOXC6P09630 235 aa10.46□□□□□ -0.73
SCRN1-201ENST00000242059 LRMPQ12912 555 aa10.46□□□□□ -0.73
SCRN1-201ENST00000242059 NR1H3Q13133 447 aa10.46□□□□□ -0.73
SCRN1-201ENST00000242059 PPP2R5EQ16537 467 aa10.46□□□□□ -0.73
SCRN1-201ENST00000242059 GRK7Q8WTQ7 553 aa10.46□□□□□ -0.73
SCRN1-201ENST00000242059 BCL2L12Q9HB09 334 aa10.46□□□□□ -0.73
SCRN1-201ENST00000242059 PRDM4Q9UKN5 801 aa10.46□□□□□ -0.73
SCRN1-201ENST00000242059 KDM6AO15550 1401 aaPredicted RBP10.46□□□□□ -0.73
SCRN1-201ENST00000242059 PSMC2P35998 433 aaKnown RBP10.46□□□□□ -0.74
SCRN1-201ENST00000242059 DRP2Q13474 957 aa10.46□□□□□ -0.74
SCRN1-201ENST00000242059 SLC10A5Q5PT55 438 aa10.46□□□□□ -0.74
SCRN1-201ENST00000242059 TTC23LQ6PF05 361 aa10.46□□□□□ -0.74
SCRN1-201ENST00000242059 CYP26C1Q6V0L0 522 aa10.46□□□□□ -0.74
SCRN1-201ENST00000242059 SCN4BQ8IWT1 228 aa10.46□□□□□ -0.74
SCRN1-201ENST00000242059 MSTO1Q9BUK6 570 aa10.46□□□□□ -0.74
SCRN1-201ENST00000242059 RIC8AQ9NPQ8 531 aa10.46□□□□□ -0.74
SCRN1-201ENST00000242059 SSH2Q76I76 1423 aa10.46□□□□□ -0.74
SCRN1-201ENST00000242059 SYNJ2BP-COX16A0A087WUM0 186 aa10.46□□□□□ -0.74
SCRN1-201ENST00000242059 DYNC1LI2O43237 492 aaPredicted RBP10.46□□□□□ -0.74
SCRN1-201ENST00000242059 PPP2R5CQ13362 524 aa10.46□□□□□ -0.74
SCRN1-201ENST00000242059 ERO1BQ86YB8 467 aa10.46□□□□□ -0.74
SCRN1-201ENST00000242059 TBC1D16Q8TBP0 767 aa10.46□□□□□ -0.74
SCRN1-201ENST00000242059 NELFBQ8WX92 580 aa10.46□□□□□ -0.74
SCRN1-201ENST00000242059 TRPV6Q9H1D0 765 aa10.46□□□□□ -0.74
SCRN1-201ENST00000242059 COX16Q9P0S2 106 aa10.46□□□□□ -0.74
SCRN1-201ENST00000242059 ASIC3Q9UHC3 531 aa10.46□□□□□ -0.74
SCRN1-201ENST00000242059 GUCA1BQ9UMX6 200 aa10.46□□□□□ -0.74
SCRN1-201ENST00000242059 MAGEB2O15479 319 aa10.45□□□□□ -0.74
SCRN1-201ENST00000242059 SNX17Q15036 470 aa10.45□□□□□ -0.74
SCRN1-201ENST00000242059 GLB1LQ6UWU2 654 aa10.45□□□□□ -0.74
SCRN1-201ENST00000242059 BZW1Q7L1Q6 419 aaKnown RBP10.45□□□□□ -0.74
SCRN1-201ENST00000242059 CHST13Q8NET6 341 aa10.45□□□□□ -0.74
SCRN1-201ENST00000242059 NKX2-3Q8TAU0 364 aa10.45□□□□□ -0.74
SCRN1-201ENST00000242059 ANGPTL3Q9Y5C1 460 aa10.45□□□□□ -0.74
SCRN1-201ENST00000242059 SNX14Q9Y5W7 946 aa10.45□□□□□ -0.74
SCRN1-201ENST00000242059 CTNND1O60716 968 aaKnown RBP10.45□□□□□ -0.74
SCRN1-201ENST00000242059 CACNB3P54284 484 aa10.45□□□□□ -0.74
SCRN1-201ENST00000242059 OR6B3Q8NGW1 331 aa10.45□□□□□ -0.74
SCRN1-201ENST00000242059 P3H4Q92791 437 aa10.45□□□□□ -0.74
SCRN1-201ENST00000242059 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.45□□□□□ -0.74
SCRN1-201ENST00000242059 MSRAQ9UJ68 235 aa10.45□□□□□ -0.74
SCRN1-201ENST00000242059 DOLKQ9UPQ8 538 aa10.45□□□□□ -0.74
SCRN1-201ENST00000242059 CCDC85CA6NKD9 419 aa10.45□□□□□ -0.74
SCRN1-201ENST00000242059 PTGDRQ13258 359 aa10.45□□□□□ -0.74
SCRN1-201ENST00000242059 HHIPL2Q6UWX4 724 aa10.45□□□□□ -0.74
SCRN1-201ENST00000242059 ACAP3Q96P50 834 aa10.45□□□□□ -0.74
SCRN1-201ENST00000242059 GPR101Q96P66 508 aaPredicted RBP10.45□□□□□ -0.74
SCRN1-201ENST00000242059 CLSTN2Q9H4D0 955 aa10.45□□□□□ -0.74
SCRN1-201ENST00000242059 MYO1AQ9UBC5 1043 aa10.45□□□□□ -0.74
SCRN1-201ENST00000242059 ZNF70Q9UC06 446 aaPredicted RBP10.45□□□□□ -0.74
SCRN1-201ENST00000242059 NDUFB9Q9Y6M9 179 aa10.45□□□□□ -0.74
SCRN1-201ENST00000242059 RRN3P2A6NIE6 340 aa10.45□□□□□ -0.74
SCRN1-201ENST00000242059 ZBTB5O15062 677 aa10.45□□□□□ -0.74
SCRN1-201ENST00000242059 ADAM9Q13443 819 aa10.45□□□□□ -0.74
SCRN1-201ENST00000242059 ZNF667Q5HYK9 610 aa10.45□□□□□ -0.74
SCRN1-201ENST00000242059 VPS16Q9H269 839 aa10.45□□□□□ -0.74
SCRN1-201ENST00000242059 TMX1Q9H3N1 280 aa10.45□□□□□ -0.74
SCRN1-201ENST00000242059 PARVGQ9HBI0 331 aa10.45□□□□□ -0.74
SCRN1-201ENST00000242059 SEPT10Q9P0V9 454 aa10.45□□□□□ -0.74
SCRN1-201ENST00000242059 PCDHB8Q9UN66 801 aa10.45□□□□□ -0.74
SCRN1-201ENST00000242059 UTP11Q9Y3A2 253 aaKnown RBP10.45□□□□□ -0.74
SCRN1-201ENST00000242059 GARSP41250 739 aaKnown RBP10.44□□□□□ -0.74
SCRN1-201ENST00000242059 RNASE9P60153 205 aaKnown RBP10.44□□□□□ -0.74
SCRN1-201ENST00000242059 EIF2B5Q13144 721 aaKnown RBP10.44□□□□□ -0.74
SCRN1-201ENST00000242059 HLFQ16534 295 aa10.44□□□□□ -0.74
SCRN1-201ENST00000242059 BSPRYQ5W0U4 402 aa10.44□□□□□ -0.74
SCRN1-201ENST00000242059 PPP4R1Q8TF05 950 aa10.44□□□□□ -0.74
SCRN1-201ENST00000242059 COG7P83436 770 aa10.44□□□□□ -0.74
SCRN1-201ENST00000242059 GNASQ5JWF2 1037 aa10.44□□□□□ -0.74
SCRN1-201ENST00000242059 PLEKHH3Q7Z736 793 aa10.44□□□□□ -0.74
SCRN1-201ENST00000242059 USP26Q9BXU7 913 aa10.44□□□□□ -0.74
SCRN1-201ENST00000242059 DNAJC25Q9H1X3 360 aa10.44□□□□□ -0.74
SCRN1-201ENST00000242059 SMARCAD1Q9H4L7 1026 aa10.44□□□□□ -0.74
SCRN1-201ENST00000242059 PREX2Q70Z35 1606 aa10.44□□□□□ -0.74
SCRN1-201ENST00000242059 TADA2AO75478 443 aa10.44□□□□□ -0.74
SCRN1-201ENST00000242059 MAGEA1P43355 309 aa10.44□□□□□ -0.74
SCRN1-201ENST00000242059 ARHGAP4P98171 946 aa10.44□□□□□ -0.74
SCRN1-201ENST00000242059 TUBB2AQ13885 445 aa10.44□□□□□ -0.74
SCRN1-201ENST00000242059 DEFB115Q30KQ5 88 aa10.44□□□□□ -0.74
SCRN1-201ENST00000242059 IGSF22Q8N9C0 903 aa10.44□□□□□ -0.74
SCRN1-201ENST00000242059 SH3TC2Q8TF17 1288 aa10.44□□□□□ -0.74
SCRN1-201ENST00000242059 CELF1Q92879 486 aaKnown RBP10.44□□□□□ -0.74
SCRN1-201ENST00000242059 TUBB2BQ9BVA1 445 aa10.44□□□□□ -0.74
SCRN1-201ENST00000242059 PCDHB7Q9Y5E2 793 aa10.44□□□□□ -0.74
SCRN1-201ENST00000242059 SLC4A7Q9Y6M7 1214 aa10.44□□□□□ -0.74
SCRN1-201ENST00000242059 KDM5AP29375 1690 aaKnown RBP10.44□□□□□ -0.74
SCRN1-201ENST00000242059 HDLBPQ00341 1268 aaKnown RBP10.44□□□□□ -0.74
SCRN1-201ENST00000242059 RPS6KA2Q15349 733 aa10.44□□□□□ -0.74
SCRN1-201ENST00000242059 PROSER3Q2NL68 480 aa10.44□□□□□ -0.74
SCRN1-201ENST00000242059 RAB44Q7Z6P3 723 aaPredicted RBP10.44□□□□□ -0.74
SCRN1-201ENST00000242059 RAB42Q8N4Z0 105 aa10.44□□□□□ -0.74
SCRN1-201ENST00000242059 ATRIPQ8WXE1 791 aa10.44□□□□□ -0.74
SCRN1-201ENST00000242059 LARP4BQ92615 738 aaKnown RBP10.44□□□□□ -0.74
SCRN1-201ENST00000242059 CDKL2Q92772 493 aa10.44□□□□□ -0.74
SCRN1-201ENST00000242059 AXIN2Q9Y2T1 843 aa10.44□□□□□ -0.74
SCRN1-201ENST00000242059 ADGBQ8N7X0 1667 aa10.44□□□□□ -0.74
SCRN1-201ENST00000242059 PSMD14O00487 310 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms