RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 MTMR1Q13613 665 aa17.02■□□□□ 0.31
HDHD3-201ENST00000238379 KLHL10Q6JEL2 608 aa17.02■□□□□ 0.31
HDHD3-201ENST00000238379 GIMAP8Q8ND71 665 aaPredicted RBP17.02■□□□□ 0.31
HDHD3-201ENST00000238379 NSUN6Q8TEA1 469 aaKnown RBP17.02■□□□□ 0.31
HDHD3-201ENST00000238379 TEKT3Q9BXF9 490 aa17.02■□□□□ 0.31
HDHD3-201ENST00000238379 UNC45AQ9H3U1 944 aa17.02■□□□□ 0.31
HDHD3-201ENST00000238379 RBPJLQ9UBG7 517 aa17.02■□□□□ 0.31
HDHD3-201ENST00000238379 FBXO40Q9UH90 709 aa17.02■□□□□ 0.31
HDHD3-201ENST00000238379 NFE2L3Q9Y4A8 694 aa17.02■□□□□ 0.31
HDHD3-201ENST00000238379 PVALEFA0A1B0GWK0 134 aa17.01■□□□□ 0.31
HDHD3-201ENST00000238379 PLA2G4BP0C869 781 aa17.01■□□□□ 0.31
HDHD3-201ENST00000238379 ATP1A3P13637 1013 aa17.01■□□□□ 0.31
HDHD3-201ENST00000238379 CCND2P30279 289 aa17.01■□□□□ 0.31
HDHD3-201ENST00000238379 KCTD17Q8N5Z5 321 aa17.01■□□□□ 0.31
HDHD3-201ENST00000238379 DDX12PQ92771 950 aa17.01■□□□□ 0.31
HDHD3-201ENST00000238379 PAGR1Q9BTK6 254 aa17.01■□□□□ 0.31
HDHD3-201ENST00000238379 RGL1Q9NZL6 768 aa17.01■□□□□ 0.31
HDHD3-201ENST00000238379 CHMP2AO43633 222 aa17■□□□□ 0.31
HDHD3-201ENST00000238379 CELF2O95319 508 aaKnown RBP17■□□□□ 0.31
HDHD3-201ENST00000238379 OSBPP22059 807 aa17■□□□□ 0.31
HDHD3-201ENST00000238379 PRCPP42785 496 aa17■□□□□ 0.31
HDHD3-201ENST00000238379 PSMC6P62333 389 aa17■□□□□ 0.31
HDHD3-201ENST00000238379 CYP4A11Q02928 519 aa17■□□□□ 0.31
HDHD3-201ENST00000238379 PDE4DQ08499 809 aa17■□□□□ 0.31
HDHD3-201ENST00000238379 ITGB3BPQ13352 177 aaPredicted RBP17■□□□□ 0.31
HDHD3-201ENST00000238379 HS1BP3Q53T59 392 aa17■□□□□ 0.31
HDHD3-201ENST00000238379 UNC13DQ70J99 1090 aa17■□□□□ 0.31
HDHD3-201ENST00000238379 DYMQ7RTS9 669 aa17■□□□□ 0.31
HDHD3-201ENST00000238379 ADSSL1Q8N142 457 aa17■□□□□ 0.31
HDHD3-201ENST00000238379 C2orf69Q8N8R5 385 aa17■□□□□ 0.31
HDHD3-201ENST00000238379 CCDC47Q96A33 483 aaKnown RBP17■□□□□ 0.31
HDHD3-201ENST00000238379 DNAJC19Q96DA6 116 aa17■□□□□ 0.31
HDHD3-201ENST00000238379 MRFAP1L1Q96HT8 127 aa17■□□□□ 0.31
HDHD3-201ENST00000238379 MS4A4AQ96JQ5 239 aa17■□□□□ 0.31
HDHD3-201ENST00000238379 MOV10L1Q9BXT6 1211 aaKnown RBP17■□□□□ 0.31
HDHD3-201ENST00000238379 TXNRD2Q9NNW7 524 aa17■□□□□ 0.31
HDHD3-201ENST00000238379 TUFT1Q9NNX1 390 aa17■□□□□ 0.31
HDHD3-201ENST00000238379 EXOC1Q9NV70 894 aa17■□□□□ 0.31
HDHD3-201ENST00000238379 SLITRK3O94933 977 aa17■□□□□ 0.31
HDHD3-201ENST00000238379 ZNF18P17022 549 aa17■□□□□ 0.31
HDHD3-201ENST00000238379 SLC12A3P55017 1021 aa17■□□□□ 0.31
HDHD3-201ENST00000238379 SPATA1Q5VX52 437 aa17■□□□□ 0.31
HDHD3-201ENST00000238379 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17■□□□□ 0.31
HDHD3-201ENST00000238379 ANKRD35Q8N283 1001 aa17■□□□□ 0.31
HDHD3-201ENST00000238379 INPP4AQ96PE3 977 aaPredicted RBP17■□□□□ 0.31
HDHD3-201ENST00000238379 DNM3Q9UQ16 869 aa17■□□□□ 0.31
HDHD3-201ENST00000238379 SSBP05455 408 aaKnown RBP eCLIP16.99■□□□□ 0.31
HDHD3-201ENST00000238379 CDC25BP30305 580 aa16.99■□□□□ 0.31
HDHD3-201ENST00000238379 STX17P56962 302 aa16.99■□□□□ 0.31
HDHD3-201ENST00000238379 STK4Q13043 487 aa16.99■□□□□ 0.31
HDHD3-201ENST00000238379 EPHA7Q15375 998 aa16.99■□□□□ 0.31
HDHD3-201ENST00000238379 DYDC2Q96IM9 177 aa16.99■□□□□ 0.31
HDHD3-201ENST00000238379 GTPBP4Q9BZE4 634 aaKnown RBP16.99■□□□□ 0.31
HDHD3-201ENST00000238379 TBC1D22BQ9NU19 505 aa16.99■□□□□ 0.31
HDHD3-201ENST00000238379 PKD2L1Q9P0L9 805 aa16.99■□□□□ 0.31
HDHD3-201ENST00000238379 RWDD2AQ9UIY3 292 aa16.99■□□□□ 0.31
HDHD3-201ENST00000238379 MAPK8IP1Q9UQF2 711 aa16.99■□□□□ 0.31
HDHD3-201ENST00000238379 PFASO15067 1338 aa16.99■□□□□ 0.31
HDHD3-201ENST00000238379 SYNRGQ9UMZ2 1314 aa16.99■□□□□ 0.31
HDHD3-201ENST00000238379 TESPA1A2RU30 521 aaPredicted RBP16.98■□□□□ 0.31
HDHD3-201ENST00000238379 ATP9AO75110 1047 aa16.98■□□□□ 0.31
HDHD3-201ENST00000238379 RGS20O76081 388 aa16.98■□□□□ 0.31
HDHD3-201ENST00000238379 ITGBL1O95965 494 aaPredicted RBP16.98■□□□□ 0.31
HDHD3-201ENST00000238379 CETPP11597 493 aa16.98■□□□□ 0.31
HDHD3-201ENST00000238379 CYP11B2P19099 503 aa16.98■□□□□ 0.31
HDHD3-201ENST00000238379 MUTP22033 750 aa16.98■□□□□ 0.31
HDHD3-201ENST00000238379 FANCCQ00597 558 aa16.98■□□□□ 0.31
HDHD3-201ENST00000238379 CNTN2Q02246 1040 aa16.98■□□□□ 0.31
HDHD3-201ENST00000238379 EHHADHQ08426 723 aa16.98■□□□□ 0.31
HDHD3-201ENST00000238379 CTTNQ14247 550 aaKnown RBP16.98■□□□□ 0.31
HDHD3-201ENST00000238379 Q3C1V9 767 aa16.98■□□□□ 0.31
HDHD3-201ENST00000238379 CST9Q5W186 159 aa16.98■□□□□ 0.31
HDHD3-201ENST00000238379 NCAPG2Q86XI2 1143 aa16.98■□□□□ 0.31
HDHD3-201ENST00000238379 SYT2Q8N9I0 419 aaPredicted RBP16.98■□□□□ 0.31
HDHD3-201ENST00000238379 DNERQ8NFT8 737 aa16.98■□□□□ 0.31
HDHD3-201ENST00000238379 GPRASP2Q96D09 838 aa16.98■□□□□ 0.31
HDHD3-201ENST00000238379 R3HDMLQ9H3Y0 253 aa16.98■□□□□ 0.31
HDHD3-201ENST00000238379 SAMSN1Q9NSI8 373 aaKnown RBP16.98■□□□□ 0.31
HDHD3-201ENST00000238379 BMP2KQ9NSY1 1161 aaPredicted RBP16.98■□□□□ 0.31
HDHD3-201ENST00000238379 CTNND2Q9UQB3 1225 aa16.98■□□□□ 0.31
HDHD3-201ENST00000238379 LCTP09848 1927 aa16.98■□□□□ 0.31
HDHD3-201ENST00000238379 ASTN1O14525 1302 aa16.98■□□□□ 0.31
HDHD3-201ENST00000238379 DDX39AO00148 427 aaKnown RBP16.98■□□□□ 0.31
HDHD3-201ENST00000238379 MAFGO15525 162 aa16.98■□□□□ 0.31
HDHD3-201ENST00000238379 SLC25A27O95847 323 aa16.98■□□□□ 0.31
HDHD3-201ENST00000238379 PTMAP06454 111 aaKnown RBP16.98■□□□□ 0.31
HDHD3-201ENST00000238379 FCER1AP12319 257 aa16.98■□□□□ 0.31
HDHD3-201ENST00000238379 ERCC3P19447 782 aa16.98■□□□□ 0.31
HDHD3-201ENST00000238379 GTF2A2P52657 109 aa16.98■□□□□ 0.31
HDHD3-201ENST00000238379 PAK1Q13153 545 aa16.98■□□□□ 0.31
HDHD3-201ENST00000238379 ARSHQ5FYA8 562 aa16.98■□□□□ 0.31
HDHD3-201ENST00000238379 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.98■□□□□ 0.31
HDHD3-201ENST00000238379 GPBP1Q86WP2 473 aa16.98■□□□□ 0.31
HDHD3-201ENST00000238379 TPH2Q8IWU9 490 aa16.98■□□□□ 0.31
HDHD3-201ENST00000238379 ZNF526Q8TF50 670 aaPredicted RBP16.98■□□□□ 0.31
HDHD3-201ENST00000238379 NELFBQ8WX92 580 aa16.98■□□□□ 0.31
HDHD3-201ENST00000238379 IWS1Q96ST2 819 aa16.98■□□□□ 0.31
HDHD3-201ENST00000238379 IFNKQ9P0W0 207 aa16.98■□□□□ 0.31
HDHD3-201ENST00000238379 IDEP14735 1019 aa16.97■□□□□ 0.31
HDHD3-201ENST00000238379 COBLL1Q53SF7 1204 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms