RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 NOL7Q9UMY1 257 aaKnown RBP26.79■■□□□ 1.88
HOMER3-201ENST00000221222 NFASCO94856 1347 aa26.79■■□□□ 1.88
HOMER3-201ENST00000221222 SLC37A4O43826 429 aa26.78■■□□□ 1.88
HOMER3-201ENST00000221222 FXR1P51114 621 aaKnown RBP eCLIP26.78■■□□□ 1.88
HOMER3-201ENST00000221222 LRRC41Q15345 812 aa26.78■■□□□ 1.88
HOMER3-201ENST00000221222 METTL7BQ6UX53 244 aa26.78■■□□□ 1.88
HOMER3-201ENST00000221222 RNF180Q86T96 592 aa26.78■■□□□ 1.88
HOMER3-201ENST00000221222 IPO5O00410 1097 aaKnown RBP26.77■■□□□ 1.88
HOMER3-201ENST00000221222 WNT7AO00755 349 aa26.77■■□□□ 1.88
HOMER3-201ENST00000221222 C6orf222P0C671 652 aaPredicted RBP26.77■■□□□ 1.88
HOMER3-201ENST00000221222 ITGB3BPQ13352 177 aaPredicted RBP26.77■■□□□ 1.88
HOMER3-201ENST00000221222 ORC2Q13416 577 aaPredicted RBP26.77■■□□□ 1.88
HOMER3-201ENST00000221222 ANKLE1Q8NAG6 615 aa26.77■■□□□ 1.88
HOMER3-201ENST00000221222 BCAS3Q9H6U6 928 aa26.77■■□□□ 1.88
HOMER3-201ENST00000221222 RBM19Q9Y4C8 960 aaKnown RBP26.77■■□□□ 1.88
HOMER3-201ENST00000221222 ALPK3Q96L96 1907 aa26.77■■□□□ 1.88
HOMER3-201ENST00000221222 MYADML2A6NDP7 307 aa26.76■■□□□ 1.87
HOMER3-201ENST00000221222 A6NJR5 290 aa26.76■■□□□ 1.87
HOMER3-201ENST00000221222 MSH4O15457 936 aa26.76■■□□□ 1.87
HOMER3-201ENST00000221222 TOB1P50616 345 aaPredicted RBP26.76■■□□□ 1.87
HOMER3-201ENST00000221222 RESTQ13127 1097 aa26.76■■□□□ 1.87
HOMER3-201ENST00000221222 FSCN1Q16658 493 aaKnown RBP26.76■■□□□ 1.87
HOMER3-201ENST00000221222 RILPL1Q5EBL4 403 aa26.76■■□□□ 1.87
HOMER3-201ENST00000221222 CCSAPQ6IQ19 270 aaPredicted RBP26.76■■□□□ 1.87
HOMER3-201ENST00000221222 CYFIP1Q7L576 1253 aa26.76■■□□□ 1.87
HOMER3-201ENST00000221222 FERMT3Q86UX7 667 aa26.76■■□□□ 1.87
HOMER3-201ENST00000221222 ETNPPLQ8TBG4 499 aa26.76■■□□□ 1.87
HOMER3-201ENST00000221222 ZNF577Q9BSK1 485 aa26.76■■□□□ 1.87
HOMER3-201ENST00000221222 MLXIPQ9HAP2 919 aa26.76■■□□□ 1.87
HOMER3-201ENST00000221222 KCNMB3Q9NPA1 279 aa26.76■■□□□ 1.87
HOMER3-201ENST00000221222 PKD2L1Q9P0L9 805 aa26.76■■□□□ 1.87
HOMER3-201ENST00000221222 PCDH10Q9P2E7 1040 aa26.76■■□□□ 1.87
HOMER3-201ENST00000221222 NR2E3Q9Y5X4 410 aa26.76■■□□□ 1.87
HOMER3-201ENST00000221222 DNM1LO00429 736 aa26.75■■□□□ 1.87
HOMER3-201ENST00000221222 DHX15O43143 795 aaKnown RBP26.75■■□□□ 1.87
HOMER3-201ENST00000221222 CPT1AP50416 773 aa26.75■■□□□ 1.87
HOMER3-201ENST00000221222 IRX5P78411 483 aaPredicted RBP26.75■■□□□ 1.87
HOMER3-201ENST00000221222 TTC38Q5R3I4 469 aa26.75■■□□□ 1.87
HOMER3-201ENST00000221222 PPTC7Q8NI37 304 aa26.75■■□□□ 1.87
HOMER3-201ENST00000221222 SLC5A5Q92911 643 aa26.75■■□□□ 1.87
HOMER3-201ENST00000221222 TBC1D22BQ9NU19 505 aa26.75■■□□□ 1.87
HOMER3-201ENST00000221222 TBX3O15119 743 aa26.74■■□□□ 1.87
HOMER3-201ENST00000221222 EVI5O60447 810 aa26.74■■□□□ 1.87
HOMER3-201ENST00000221222 ATP2B1P20020 1258 aa26.74■■□□□ 1.87
HOMER3-201ENST00000221222 MNX1P50219 401 aaPredicted RBP26.74■■□□□ 1.87
HOMER3-201ENST00000221222 GNASQ5JWF2 1037 aa26.74■■□□□ 1.87
HOMER3-201ENST00000221222 AFG1LQ8WV93 481 aa26.74■■□□□ 1.87
HOMER3-201ENST00000221222 SDF4Q9BRK5 362 aa26.74■■□□□ 1.87
HOMER3-201ENST00000221222 TSEN34Q9BSV6 310 aaKnown RBP26.74■■□□□ 1.87
HOMER3-201ENST00000221222 ZSCAN16Q9H4T2 348 aaPredicted RBP26.74■■□□□ 1.87
HOMER3-201ENST00000221222 NEMFO60524 1076 aa26.73■■□□□ 1.87
HOMER3-201ENST00000221222 HOXD8P13378 290 aaPredicted RBP26.73■■□□□ 1.87
HOMER3-201ENST00000221222 BEX3Q00994 111 aa26.73■■□□□ 1.87
HOMER3-201ENST00000221222 HSDL1Q3SXM5 330 aa26.73■■□□□ 1.87
HOMER3-201ENST00000221222 BRDTQ58F21 947 aaPredicted RBP26.73■■□□□ 1.87
HOMER3-201ENST00000221222 NECAB2Q7Z6G3 386 aa26.73■■□□□ 1.87
HOMER3-201ENST00000221222 POTEDQ86YR6 584 aa26.73■■□□□ 1.87
HOMER3-201ENST00000221222 PCSK9Q8NBP7 692 aaKnown RBP26.73■■□□□ 1.87
HOMER3-201ENST00000221222 SPATA33Q96N06 139 aa26.73■■□□□ 1.87
HOMER3-201ENST00000221222 RIT2Q99578 217 aa26.73■■□□□ 1.87
HOMER3-201ENST00000221222 JPH1Q9HDC5 661 aaPredicted RBP26.73■■□□□ 1.87
HOMER3-201ENST00000221222 MYH15Q9Y2K3 1946 aa26.73■■□□□ 1.87
HOMER3-201ENST00000221222 KBTBD13C9JR72 458 aa26.72■■□□□ 1.87
HOMER3-201ENST00000221222 SORBS3O60504 671 aa26.72■■□□□ 1.87
HOMER3-201ENST00000221222 MMP3P08254 477 aa26.72■■□□□ 1.87
HOMER3-201ENST00000221222 ZSCAN22P10073 491 aaPredicted RBP26.72■■□□□ 1.87
HOMER3-201ENST00000221222 FAM20AQ96MK3 541 aa26.72■■□□□ 1.87
HOMER3-201ENST00000221222 SLC9A2Q9UBY0 812 aa26.72■■□□□ 1.87
HOMER3-201ENST00000221222 MOXD2PA6NHM9 499 aa26.71■■□□□ 1.87
HOMER3-201ENST00000221222 MYCNP04198 464 aaPredicted RBP26.71■■□□□ 1.87
HOMER3-201ENST00000221222 MCM7P33993 719 aa26.71■■□□□ 1.87
HOMER3-201ENST00000221222 PKP1Q13835 747 aa26.71■■□□□ 1.87
HOMER3-201ENST00000221222 KCNA10Q16322 511 aa26.71■■□□□ 1.87
HOMER3-201ENST00000221222 PCDHB6Q9Y5E3 794 aa26.71■■□□□ 1.87
HOMER3-201ENST00000221222 ZEB2O60315 1214 aa26.71■■□□□ 1.87
HOMER3-201ENST00000221222 PSMD10O75832 226 aa26.71■■□□□ 1.87
HOMER3-201ENST00000221222 DDIT3P35638 169 aa26.71■■□□□ 1.87
HOMER3-201ENST00000221222 NBR1Q14596 966 aa26.71■■□□□ 1.87
HOMER3-201ENST00000221222 ZNF174Q15697 407 aa26.71■■□□□ 1.87
HOMER3-201ENST00000221222 HAS1Q92839 578 aa26.71■■□□□ 1.87
HOMER3-201ENST00000221222 UIMC1Q96RL1 719 aa26.71■■□□□ 1.87
HOMER3-201ENST00000221222 GPR20Q99678 358 aa26.71■■□□□ 1.87
HOMER3-201ENST00000221222 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.71■■□□□ 1.87
HOMER3-201ENST00000221222 DAXXQ9UER7 740 aaPredicted RBP26.71■■□□□ 1.87
HOMER3-201ENST00000221222 PHF24Q9UPV7 400 aa26.71■■□□□ 1.87
HOMER3-201ENST00000221222 NOP56O00567 594 aaKnown RBP26.7■■□□□ 1.86
HOMER3-201ENST00000221222 KPNA6O60684 536 aa26.7■■□□□ 1.86
HOMER3-201ENST00000221222 GAS7O60861 476 aa26.7■■□□□ 1.86
HOMER3-201ENST00000221222 PPFIA4O75335 1185 aa26.7■■□□□ 1.86
HOMER3-201ENST00000221222 ACLYP53396 1101 aa26.7■■□□□ 1.86
HOMER3-201ENST00000221222 CALCRLQ16602 461 aa26.7■■□□□ 1.86
HOMER3-201ENST00000221222 DGKDQ16760 1214 aa26.7■■□□□ 1.86
HOMER3-201ENST00000221222 LRCH2Q5VUJ6 765 aa26.7■■□□□ 1.86
HOMER3-201ENST00000221222 SLFN12Q8IYM2 578 aa26.7■■□□□ 1.86
HOMER3-201ENST00000221222 MTMR9Q96QG7 549 aa26.7■■□□□ 1.86
HOMER3-201ENST00000221222 POLR3EQ9NVU0 708 aa26.7■■□□□ 1.86
HOMER3-201ENST00000221222 TELO2Q9Y4R8 837 aa26.7■■□□□ 1.86
HOMER3-201ENST00000221222 BRD1O95696 1058 aa26.69■■□□□ 1.86
HOMER3-201ENST00000221222 F13A1P00488 732 aa26.69■■□□□ 1.86
HOMER3-201ENST00000221222 ASGR1P07306 291 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms