RNA–Protein interactions for RNA: ENST00000215587.11

POLR2E-201, Transcript of RNA polymerase II subunit E, humanhuman

TSL 3

Gene POLR2E, Length 1,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-201ENST00000215587 CABP7Q86V35 215 aa18.66■□□□□ 0.58
POLR2E-201ENST00000215587 FMR1NBQ8N0W7 255 aaPredicted RBP18.66■□□□□ 0.58
POLR2E-201ENST00000215587 MSL3Q8N5Y2 521 aaKnown RBP18.66■□□□□ 0.58
POLR2E-201ENST00000215587 MAML3Q96JK9 1138 aa18.66■□□□□ 0.58
POLR2E-201ENST00000215587 APBA2Q99767 749 aa18.66■□□□□ 0.58
POLR2E-201ENST00000215587 SDF4Q9BRK5 362 aa18.66■□□□□ 0.58
POLR2E-201ENST00000215587 CCSER1Q9C0I3 900 aa18.66■□□□□ 0.58
POLR2E-201ENST00000215587 CCDC39Q9UFE4 941 aa18.66■□□□□ 0.58
POLR2E-201ENST00000215587 VAV3Q9UKW4 847 aa18.66■□□□□ 0.58
POLR2E-201ENST00000215587 PP2D1A8MPX8 630 aa18.65■□□□□ 0.58
POLR2E-201ENST00000215587 SPATA31C2B4DYI2 1134 aa18.65■□□□□ 0.58
POLR2E-201ENST00000215587 HOXC6P09630 235 aa18.65■□□□□ 0.58
POLR2E-201ENST00000215587 ICAM3P32942 547 aa18.65■□□□□ 0.58
POLR2E-201ENST00000215587 PPP2R5CQ13362 524 aa18.65■□□□□ 0.58
POLR2E-201ENST00000215587 KCNV1Q6PIU1 500 aa18.65■□□□□ 0.58
POLR2E-201ENST00000215587 MAMDC4Q6UXC1 1216 aa18.65■□□□□ 0.58
POLR2E-201ENST00000215587 ENGASEQ8NFI3 743 aa18.65■□□□□ 0.58
POLR2E-201ENST00000215587 NPLOC4Q8TAT6 608 aa18.65■□□□□ 0.58
POLR2E-201ENST00000215587 SNX29Q8TEQ0 813 aa18.65■□□□□ 0.58
POLR2E-201ENST00000215587 USP6NLQ92738 828 aa18.65■□□□□ 0.58
POLR2E-201ENST00000215587 CALML4Q96GE6 196 aa18.65■□□□□ 0.58
POLR2E-201ENST00000215587 CDK5RAP3Q96JB5 506 aa18.65■□□□□ 0.58
POLR2E-201ENST00000215587 TRIM47Q96LD4 638 aa18.65■□□□□ 0.58
POLR2E-201ENST00000215587 SYNGAP1Q96PV0 1343 aa18.65■□□□□ 0.58
POLR2E-201ENST00000215587 LRRC37A2A6NM11 1700 aa18.65■□□□□ 0.58
POLR2E-201ENST00000215587 SLC26A4O43511 780 aa18.64■□□□□ 0.57
POLR2E-201ENST00000215587 ZNF202O95125 648 aa18.64■□□□□ 0.57
POLR2E-201ENST00000215587 CDC25AP30304 524 aa18.64■□□□□ 0.57
POLR2E-201ENST00000215587 SPIRE1Q08AE8 756 aa18.64■□□□□ 0.57
POLR2E-201ENST00000215587 SEMA3FQ13275 785 aa18.64■□□□□ 0.57
POLR2E-201ENST00000215587 ITGB3BPQ13352 177 aaPredicted RBP18.64■□□□□ 0.57
POLR2E-201ENST00000215587 CCDC183Q5T5S1 534 aa18.64■□□□□ 0.57
POLR2E-201ENST00000215587 HAUS3Q68CZ6 603 aa18.64■□□□□ 0.57
POLR2E-201ENST00000215587 EEPD1Q7L9B9 569 aa18.64■□□□□ 0.57
POLR2E-201ENST00000215587 PDILTQ8N807 584 aa18.64■□□□□ 0.57
POLR2E-201ENST00000215587 VTA1Q9NP79 307 aa18.64■□□□□ 0.57
POLR2E-201ENST00000215587 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.64■□□□□ 0.57
POLR2E-201ENST00000215587 USP25Q9UHP3 1055 aa18.64■□□□□ 0.57
POLR2E-201ENST00000215587 KDM3AQ9Y4C1 1321 aa18.64■□□□□ 0.57
POLR2E-201ENST00000215587 ZNFX1Q9P2E3 1918 aaKnown RBP18.64■□□□□ 0.57
POLR2E-201ENST00000215587 PLXNA1Q9UIW2 1896 aa18.63■□□□□ 0.57
POLR2E-201ENST00000215587 DDX39AO00148 427 aaKnown RBP18.63■□□□□ 0.57
POLR2E-201ENST00000215587 POLR2DO15514 142 aaKnown RBP18.63■□□□□ 0.57
POLR2E-201ENST00000215587 CHMP2AO43633 222 aa18.63■□□□□ 0.57
POLR2E-201ENST00000215587 TGFB3P10600 412 aa18.63■□□□□ 0.57
POLR2E-201ENST00000215587 CCT6AP40227 531 aaKnown RBP18.63■□□□□ 0.57
POLR2E-201ENST00000215587 KRT76Q01546 638 aa18.63■□□□□ 0.57
POLR2E-201ENST00000215587 SNW1Q13573 536 aaKnown RBP18.63■□□□□ 0.57
POLR2E-201ENST00000215587 KARSQ15046 597 aaKnown RBP18.63■□□□□ 0.57
POLR2E-201ENST00000215587 ZRSR1Q15695 479 aaKnown RBP18.63■□□□□ 0.57
POLR2E-201ENST00000215587 PKN2Q16513 984 aaKnown RBP18.63■□□□□ 0.57
POLR2E-201ENST00000215587 OTOP1Q7RTM1 612 aa18.63■□□□□ 0.57
POLR2E-201ENST00000215587 FBXO16Q8IX29 292 aaPredicted RBP18.63■□□□□ 0.57
POLR2E-201ENST00000215587 GIMAP8Q8ND71 665 aaPredicted RBP18.63■□□□□ 0.57
POLR2E-201ENST00000215587 CCDC34Q96HJ3 373 aa18.63■□□□□ 0.57
POLR2E-201ENST00000215587 TINF2Q9BSI4 451 aa18.63■□□□□ 0.57
POLR2E-201ENST00000215587 PANK2Q9BZ23 570 aa18.63■□□□□ 0.57
POLR2E-201ENST00000215587 ARHGAP39Q9C0H5 1083 aa18.63■□□□□ 0.57
POLR2E-201ENST00000215587 NUP62CLQ9H1M0 184 aa18.63■□□□□ 0.57
POLR2E-201ENST00000215587 UNC45AQ9H3U1 944 aa18.63■□□□□ 0.57
POLR2E-201ENST00000215587 CLSTN2Q9H4D0 955 aa18.63■□□□□ 0.57
POLR2E-201ENST00000215587 GJD2Q9UKL4 321 aa18.63■□□□□ 0.57
POLR2E-201ENST00000215587 NFASCO94856 1347 aa18.63■□□□□ 0.57
POLR2E-201ENST00000215587 GPR25O00155 361 aa18.62■□□□□ 0.57
POLR2E-201ENST00000215587 DHX15O43143 795 aaKnown RBP18.62■□□□□ 0.57
POLR2E-201ENST00000215587 KCNA2P16389 499 aa18.62■□□□□ 0.57
POLR2E-201ENST00000215587 CYP2B6P20813 491 aa18.62■□□□□ 0.57
POLR2E-201ENST00000215587 CTGFP29279 349 aa18.62■□□□□ 0.57
POLR2E-201ENST00000215587 STAT6P42226 847 aa18.62■□□□□ 0.57
POLR2E-201ENST00000215587 OLFML2BQ68BL8 750 aa18.62■□□□□ 0.57
POLR2E-201ENST00000215587 MIER3Q7Z3K6 550 aa18.62■□□□□ 0.57
POLR2E-201ENST00000215587 CEP57L1Q8IYX8 460 aa18.62■□□□□ 0.57
POLR2E-201ENST00000215587 IQUBQ8NA54 791 aa18.62■□□□□ 0.57
POLR2E-201ENST00000215587 SCFD2Q8WU76 684 aa18.62■□□□□ 0.57
POLR2E-201ENST00000215587 DHX58Q96C10 678 aa18.62■□□□□ 0.57
POLR2E-201ENST00000215587 TIGD1Q96MW7 591 aa18.62■□□□□ 0.57
POLR2E-201ENST00000215587 SENP7Q9BQF6 1050 aa18.62■□□□□ 0.57
POLR2E-201ENST00000215587 ANP32EQ9BTT0 268 aa18.62■□□□□ 0.57
POLR2E-201ENST00000215587 MMTAG2Q9BU76 263 aaKnown RBP18.62■□□□□ 0.57
POLR2E-201ENST00000215587 DISC1Q9NRI5 854 aa18.62■□□□□ 0.57
POLR2E-201ENST00000215587 TMEM63CQ9P1W3 806 aa18.62■□□□□ 0.57
POLR2E-201ENST00000215587 FKTNO75072 461 aa18.61■□□□□ 0.57
POLR2E-201ENST00000215587 ATP9AO75110 1047 aa18.61■□□□□ 0.57
POLR2E-201ENST00000215587 HOXD10P28358 340 aa18.61■□□□□ 0.57
POLR2E-201ENST00000215587 SFNP31947 248 aa18.61■□□□□ 0.57
POLR2E-201ENST00000215587 JAK3P52333 1124 aa18.61■□□□□ 0.57
POLR2E-201ENST00000215587 NEDD9Q14511 834 aa18.61■□□□□ 0.57
POLR2E-201ENST00000215587 TTLL4Q14679 1199 aa18.61■□□□□ 0.57
POLR2E-201ENST00000215587 ARHGEF6Q15052 776 aa18.61■□□□□ 0.57
POLR2E-201ENST00000215587 HABP4Q5JVS0 413 aaKnown RBP18.61■□□□□ 0.57
POLR2E-201ENST00000215587 RRAGBQ5VZM2 374 aa18.61■□□□□ 0.57
POLR2E-201ENST00000215587 ZNF746Q6NUN9 644 aaPredicted RBP18.61■□□□□ 0.57
POLR2E-201ENST00000215587 KANK3Q6NY19 840 aa18.61■□□□□ 0.57
POLR2E-201ENST00000215587 CNNM3Q8NE01 707 aa18.61■□□□□ 0.57
POLR2E-201ENST00000215587 ERO1AQ96HE7 468 aa18.61■□□□□ 0.57
POLR2E-201ENST00000215587 NT5C3AQ9H0P0 336 aa18.61■□□□□ 0.57
POLR2E-201ENST00000215587 TNMDQ9H2S6 317 aa18.61■□□□□ 0.57
POLR2E-201ENST00000215587 A0A087X0B3 334 aa18.6■□□□□ 0.57
POLR2E-201ENST00000215587 WDR64B1ANS9 1081 aa18.6■□□□□ 0.57
POLR2E-201ENST00000215587 CTAGE5O15320 804 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms