RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 GUCY1A2P33402 732 aa13.25□□□□□ -0.29
TSPAN9-201ENST00000011898 NNTQ13423 1086 aa13.25□□□□□ -0.29
TSPAN9-201ENST00000011898 GRAPQ13588 217 aa13.25□□□□□ -0.29
TSPAN9-201ENST00000011898 METTL16Q86W50 562 aaKnown RBP13.25□□□□□ -0.29
TSPAN9-201ENST00000011898 ENGASEQ8NFI3 743 aa13.25□□□□□ -0.29
TSPAN9-201ENST00000011898 GRAPLQ8TC17 118 aaPredicted RBP13.25□□□□□ -0.29
TSPAN9-201ENST00000011898 TSKSQ9UJT2 592 aa13.25□□□□□ -0.29
TSPAN9-201ENST00000011898 GDAQ9Y2T3 454 aa13.25□□□□□ -0.29
TSPAN9-201ENST00000011898 SCN7AQ01118 1682 aa13.25□□□□□ -0.29
TSPAN9-201ENST00000011898 NDUFA10O95299 355 aa13.25□□□□□ -0.29
TSPAN9-201ENST00000011898 PRR29P0C7W0 189 aa13.25□□□□□ -0.29
TSPAN9-201ENST00000011898 EAPPQ56P03 285 aaPredicted RBP13.25□□□□□ -0.29
TSPAN9-201ENST00000011898 P2RX5Q93086 422 aa13.25□□□□□ -0.29
TSPAN9-201ENST00000011898 DHTKD1Q96HY7 919 aaPredicted RBP13.25□□□□□ -0.29
TSPAN9-201ENST00000011898 LCMT1Q9UIC8 334 aa13.25□□□□□ -0.29
TSPAN9-201ENST00000011898 HYOU1Q9Y4L1 999 aa13.25□□□□□ -0.29
TSPAN9-201ENST00000011898 PCDHB13Q9Y5F0 798 aa13.25□□□□□ -0.29
TSPAN9-201ENST00000011898 ABCC12Q96J65 1359 aa13.25□□□□□ -0.29
TSPAN9-201ENST00000011898 TEX33O43247 280 aa13.25□□□□□ -0.29
TSPAN9-201ENST00000011898 CIB2O75838 187 aa13.25□□□□□ -0.29
TSPAN9-201ENST00000011898 TNFAIP3P21580 790 aa13.25□□□□□ -0.29
TSPAN9-201ENST00000011898 VPS41P49754 854 aa13.25□□□□□ -0.29
TSPAN9-201ENST00000011898 CYP27A1Q02318 531 aa13.25□□□□□ -0.29
TSPAN9-201ENST00000011898 USH1GQ495M9 461 aa13.25□□□□□ -0.29
TSPAN9-201ENST00000011898 FAM26FQ5R3K3 315 aa13.25□□□□□ -0.29
TSPAN9-201ENST00000011898 KSR1Q8IVT5 923 aa13.25□□□□□ -0.29
TSPAN9-201ENST00000011898 ENAHQ8N8S7 591 aaPredicted RBP13.25□□□□□ -0.29
TSPAN9-201ENST00000011898 ANKRD42Q8N9B4 389 aa13.25□□□□□ -0.29
TSPAN9-201ENST00000011898 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.25□□□□□ -0.29
TSPAN9-201ENST00000011898 BSDC1Q9NW68 430 aaPredicted RBP13.25□□□□□ -0.29
TSPAN9-201ENST00000011898 PKD2L1Q9P0L9 805 aa13.25□□□□□ -0.29
TSPAN9-201ENST00000011898 NPR1P16066 1061 aa13.25□□□□□ -0.29
TSPAN9-201ENST00000011898 BTDP43251 543 aa13.25□□□□□ -0.29
TSPAN9-201ENST00000011898 PHLDB3Q6NSJ2 640 aa13.25□□□□□ -0.29
TSPAN9-201ENST00000011898 PHLDB2Q86SQ0 1253 aa13.25□□□□□ -0.29
TSPAN9-201ENST00000011898 PACS2Q86VP3 889 aa13.25□□□□□ -0.29
TSPAN9-201ENST00000011898 DYNLL2Q96FJ2 89 aa13.25□□□□□ -0.29
TSPAN9-201ENST00000011898 PSTPIP2Q9H939 334 aa13.25□□□□□ -0.29
TSPAN9-201ENST00000011898 NOL3O60936 208 aaKnown RBP13.24□□□□□ -0.29
TSPAN9-201ENST00000011898 ANTXR2P58335 489 aa13.24□□□□□ -0.29
TSPAN9-201ENST00000011898 TMTC3Q6ZXV5 915 aa13.24□□□□□ -0.29
TSPAN9-201ENST00000011898 APBB1IPQ7Z5R6 666 aaPredicted RBP13.24□□□□□ -0.29
TSPAN9-201ENST00000011898 PARP9Q8IXQ6 854 aa13.24□□□□□ -0.29
TSPAN9-201ENST00000011898 LSM14BQ9BX40 385 aaKnown RBP13.24□□□□□ -0.29
TSPAN9-201ENST00000011898 CUEDC2Q9H467 287 aa13.24□□□□□ -0.29
TSPAN9-201ENST00000011898 KIF9Q9HAQ2 790 aa13.24□□□□□ -0.29
TSPAN9-201ENST00000011898 CD248Q9HCU0 757 aa13.24□□□□□ -0.29
TSPAN9-201ENST00000011898 BBOX1O75936 387 aa13.24□□□□□ -0.29
TSPAN9-201ENST00000011898 GCNT3O95395 438 aa13.24□□□□□ -0.29
TSPAN9-201ENST00000011898 POLR2FP61218 127 aaKnown RBP13.24□□□□□ -0.29
TSPAN9-201ENST00000011898 MECOMQ03112 1051 aa13.24□□□□□ -0.29
TSPAN9-201ENST00000011898 DDR1Q08345 913 aa13.24□□□□□ -0.29
TSPAN9-201ENST00000011898 CUL4BQ13620 913 aa13.24□□□□□ -0.29
TSPAN9-201ENST00000011898 PEX26Q7Z412 305 aa13.24□□□□□ -0.29
TSPAN9-201ENST00000011898 GPBP1Q86WP2 473 aa13.24□□□□□ -0.29
TSPAN9-201ENST00000011898 IQCGQ9H095 443 aaKnown RBP13.24□□□□□ -0.29
TSPAN9-201ENST00000011898 MRPL44Q9H9J2 332 aaKnown RBP13.24□□□□□ -0.29
TSPAN9-201ENST00000011898 KLHL14Q9P2G3 628 aa13.24□□□□□ -0.29
TSPAN9-201ENST00000011898 LAD1O00515 517 aa13.24□□□□□ -0.29
TSPAN9-201ENST00000011898 CALUO43852 315 aaPredicted RBP13.24□□□□□ -0.29
TSPAN9-201ENST00000011898 TADA3O75528 432 aa13.24□□□□□ -0.29
TSPAN9-201ENST00000011898 SKAP2O75563 359 aaPredicted RBP13.24□□□□□ -0.29
TSPAN9-201ENST00000011898 PDCD2Q16342 344 aaPredicted RBP13.24□□□□□ -0.29
TSPAN9-201ENST00000011898 UPF1Q92900 1129 aaKnown RBP eCLIP13.24□□□□□ -0.293e-9■■■■■ 56
TSPAN9-201ENST00000011898 AK8Q96MA6 479 aa13.24□□□□□ -0.29
TSPAN9-201ENST00000011898 CD2APQ9Y5K6 639 aa13.24□□□□□ -0.29
TSPAN9-201ENST00000011898 BAG2O95816 211 aa13.23□□□□□ -0.29
TSPAN9-201ENST00000011898 TCP11X2Q5H9J9 407 aa13.23□□□□□ -0.29
TSPAN9-201ENST00000011898 ARL6IP4Q66PJ3 421 aaKnown RBP13.23□□□□□ -0.29
TSPAN9-201ENST00000011898 RETREG2Q8NC44 543 aa13.23□□□□□ -0.29
TSPAN9-201ENST00000011898 IGDCC4Q8TDY8 1250 aa13.23□□□□□ -0.29
TSPAN9-201ENST00000011898 TBCKQ8TEA7 893 aa13.23□□□□□ -0.29
TSPAN9-201ENST00000011898 RAB3IPQ96QF0 476 aaPredicted RBP13.23□□□□□ -0.29
TSPAN9-201ENST00000011898 ARMCX3Q9UH62 379 aaPredicted RBP13.23□□□□□ -0.29
TSPAN9-201ENST00000011898 FAM170AA1A519 330 aa13.23□□□□□ -0.29
TSPAN9-201ENST00000011898 SLMAPQ14BN4 828 aa13.23□□□□□ -0.29
TSPAN9-201ENST00000011898 PTPROQ16827 1216 aa13.23□□□□□ -0.29
TSPAN9-201ENST00000011898 MIER3Q7Z3K6 550 aa13.23□□□□□ -0.29
TSPAN9-201ENST00000011898 LARP4BQ92615 738 aaKnown RBP13.23□□□□□ -0.29
TSPAN9-201ENST00000011898 ATP6V0A2Q9Y487 856 aa13.23□□□□□ -0.29
TSPAN9-201ENST00000011898 BCORQ6W2J9 1755 aa13.23□□□□□ -0.29
TSPAN9-201ENST00000011898 USP17L3A6NCW0 530 aa13.23□□□□□ -0.29
TSPAN9-201ENST00000011898 USP17L4A6NCW7 530 aa13.23□□□□□ -0.29
TSPAN9-201ENST00000011898 MYO1FO00160 1098 aa13.23□□□□□ -0.29
TSPAN9-201ENST00000011898 HNRNPCP07910 306 aaKnown RBP eCLIP13.23□□□□□ -0.296e-6■■■■□ 19.3
TSPAN9-201ENST00000011898 NR1D1P20393 614 aa13.23□□□□□ -0.29
TSPAN9-201ENST00000011898 ST3GAL1Q11201 340 aa13.23□□□□□ -0.29
TSPAN9-201ENST00000011898 R3HDM1Q15032 1099 aaKnown RBP13.23□□□□□ -0.29
TSPAN9-201ENST00000011898 NBPF9Q3BBW0 867 aa13.23□□□□□ -0.29
TSPAN9-201ENST00000011898 USP17L2Q6R6M4 530 aa13.23□□□□□ -0.29
TSPAN9-201ENST00000011898 USP17L1Q7RTZ2 530 aa13.23□□□□□ -0.29
TSPAN9-201ENST00000011898 MYCT1Q8N699 235 aa13.23□□□□□ -0.29
TSPAN9-201ENST00000011898 KCNV2Q8TDN2 545 aa13.23□□□□□ -0.29
TSPAN9-201ENST00000011898 CNKSR1Q969H4 720 aa13.23□□□□□ -0.29
TSPAN9-201ENST00000011898 NBPF3Q9H094 633 aa13.23□□□□□ -0.29
TSPAN9-201ENST00000011898 MAGEF1Q9HAY2 307 aa13.23□□□□□ -0.29
TSPAN9-201ENST00000011898 USP40Q9NVE5 1235 aa13.23□□□□□ -0.29
TSPAN9-201ENST00000011898 LARSQ9P2J5 1176 aaKnown RBP13.23□□□□□ -0.29
TSPAN9-201ENST00000011898 TNS1Q9HBL0 1735 aaKnown RBP13.23□□□□□ -0.29
TSPAN9-201ENST00000011898 RGS16O15492 202 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms