RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 BIRC2Q13490 618 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 SBK1Q52WX2 424 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 C6orf163Q5TEZ5 329 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 PPP1R2P3Q6NXS1 205 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 CCDC89Q8N998 374 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 RAB3IL1Q8TBN0 382 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 ZBED2Q9BTP6 218 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 ODF2LQ9ULJ1 636 aa11.32□□□□□ -0.6
NIPAL3-201ENST00000003912 TLDC2A0PJX2 215 aa11.31□□□□□ -0.6
NIPAL3-201ENST00000003912 ATP5DP30049 168 aa11.31□□□□□ -0.6
NIPAL3-201ENST00000003912 ALDH3A1P30838 453 aa11.31□□□□□ -0.6
NIPAL3-201ENST00000003912 USP17L6PQ6QN14 398 aa11.31□□□□□ -0.6
NIPAL3-201ENST00000003912 ZBTB33Q86T24 672 aa11.31□□□□□ -0.6
NIPAL3-201ENST00000003912 AIFM3Q96NN9 605 aa11.31□□□□□ -0.6
NIPAL3-201ENST00000003912 ZFYVE28Q9HCC9 887 aa11.31□□□□□ -0.6
NIPAL3-201ENST00000003912 FANCLQ9NW38 375 aa11.31□□□□□ -0.6
NIPAL3-201ENST00000003912 TTLL3Q9Y4R7 772 aa11.31□□□□□ -0.6
NIPAL3-201ENST00000003912 BZW2Q9Y6E2 419 aaKnown RBP11.31□□□□□ -0.6
NIPAL3-201ENST00000003912 TMEM131LA2VDJ0 1609 aa11.31□□□□□ -0.6
NIPAL3-201ENST00000003912 RNF8O76064 485 aa11.31□□□□□ -0.6
NIPAL3-201ENST00000003912 RNASE9P60153 205 aaKnown RBP11.31□□□□□ -0.6
NIPAL3-201ENST00000003912 ARHGAP4P98171 946 aa11.31□□□□□ -0.6
NIPAL3-201ENST00000003912 NFX1Q12986 1120 aaKnown RBP11.31□□□□□ -0.6
NIPAL3-201ENST00000003912 TKFCQ3LXA3 575 aa11.31□□□□□ -0.6
NIPAL3-201ENST00000003912 HAUS1Q96CS2 278 aa11.31□□□□□ -0.6
NIPAL3-201ENST00000003912 TUBGCP2Q9BSJ2 902 aa11.31□□□□□ -0.6
NIPAL3-201ENST00000003912 BHMT2Q9H2M3 363 aa11.31□□□□□ -0.6
NIPAL3-201ENST00000003912 TYW5A2RUC4 315 aaKnown RBP11.31□□□□□ -0.6
NIPAL3-201ENST00000003912 RRP9O43818 475 aaKnown RBP11.31□□□□□ -0.6
NIPAL3-201ENST00000003912 LRRC41Q15345 812 aa11.31□□□□□ -0.6
NIPAL3-201ENST00000003912 CFAP221Q4G0U5 840 aa11.31□□□□□ -0.6
NIPAL3-201ENST00000003912 TDRD7Q8NHU6 1098 aaKnown RBP11.31□□□□□ -0.6
NIPAL3-201ENST00000003912 FTOQ9C0B1 505 aaKnown RBP eCLIP11.31□□□□□ -0.6
NIPAL3-201ENST00000003912 FAM107BQ9H098 131 aa11.31□□□□□ -0.6
NIPAL3-201ENST00000003912 UBN2Q6ZU65 1347 aa11.31□□□□□ -0.6
NIPAL3-201ENST00000003912 LDHAP00338 332 aaKnown RBP11.31□□□□□ -0.6
NIPAL3-201ENST00000003912 IVLP07476 585 aa11.31□□□□□ -0.6
NIPAL3-201ENST00000003912 PHKA2P46019 1235 aa11.31□□□□□ -0.6
NIPAL3-201ENST00000003912 MMP14P50281 582 aa11.31□□□□□ -0.6
NIPAL3-201ENST00000003912 COPB1P53618 953 aaKnown RBP11.31□□□□□ -0.6
NIPAL3-201ENST00000003912 HDLBPQ00341 1268 aaKnown RBP11.31□□□□□ -0.6
NIPAL3-201ENST00000003912 ARFGAP2Q8N6H7 521 aa11.31□□□□□ -0.6
NIPAL3-201ENST00000003912 UBLCP1Q8WVY7 318 aaPredicted RBP11.31□□□□□ -0.6
NIPAL3-201ENST00000003912 SELENOSQ9BQE4 189 aa11.31□□□□□ -0.6
NIPAL3-201ENST00000003912 ZNF302Q9NR11 478 aa11.31□□□□□ -0.6
NIPAL3-201ENST00000003912 SMIM23A6NLE4 172 aa11.3□□□□□ -0.6
NIPAL3-201ENST00000003912 PKP1Q13835 747 aa11.3□□□□□ -0.6
NIPAL3-201ENST00000003912 PDIA6Q15084 440 aa11.3□□□□□ -0.6
NIPAL3-201ENST00000003912 RSRC2Q7L4I2 434 aaKnown RBP11.3□□□□□ -0.6
NIPAL3-201ENST00000003912 CCDC105Q8IYK2 499 aa11.3□□□□□ -0.6
NIPAL3-201ENST00000003912 PPP1R16BQ96T49 567 aa11.3□□□□□ -0.6
NIPAL3-201ENST00000003912 PCIF1Q9H4Z3 704 aa11.3□□□□□ -0.6
NIPAL3-201ENST00000003912 BARHL2Q9NY43 387 aa11.3□□□□□ -0.6
NIPAL3-201ENST00000003912 ADGRB1O14514 1584 aa11.3□□□□□ -0.6
NIPAL3-201ENST00000003912 ERICH4A6NGS2 130 aa11.3□□□□□ -0.6
NIPAL3-201ENST00000003912 UAP1Q16222 522 aaPredicted RBP11.3□□□□□ -0.6
NIPAL3-201ENST00000003912 MSTO1Q9BUK6 570 aa11.3□□□□□ -0.6
NIPAL3-201ENST00000003912 CPVLQ9H3G5 476 aa11.3□□□□□ -0.6
NIPAL3-201ENST00000003912 IFT122Q9HBG6 1241 aa11.3□□□□□ -0.6
NIPAL3-201ENST00000003912 SLIT1O75093 1534 aa11.3□□□□□ -0.6
NIPAL3-201ENST00000003912 H2AFZP0C0S5 128 aa11.3□□□□□ -0.6
NIPAL3-201ENST00000003912 ITIH3Q06033 890 aa11.3□□□□□ -0.6
NIPAL3-201ENST00000003912 H2AFVQ71UI9 128 aa11.3□□□□□ -0.6
NIPAL3-201ENST00000003912 DAAM2Q86T65 1068 aa11.3□□□□□ -0.6
NIPAL3-201ENST00000003912 LDHDQ86WU2 507 aa11.3□□□□□ -0.6
NIPAL3-201ENST00000003912 GSDMBQ8TAX9 411 aa11.3□□□□□ -0.6
NIPAL3-201ENST00000003912 TRIM11Q96F44 468 aa11.3□□□□□ -0.6
NIPAL3-201ENST00000003912 ZMYND15Q9H091 742 aa11.3□□□□□ -0.6
NIPAL3-201ENST00000003912 NYAP2Q9P242 653 aa11.3□□□□□ -0.6
NIPAL3-201ENST00000003912 ZNF233A6NK53 670 aa11.3□□□□□ -0.6
NIPAL3-201ENST00000003912 CDC25AP30304 524 aa11.3□□□□□ -0.6
NIPAL3-201ENST00000003912 ADKP55263 362 aaKnown RBP11.3□□□□□ -0.6
NIPAL3-201ENST00000003912 TNFAIP2Q03169 654 aa11.3□□□□□ -0.6
NIPAL3-201ENST00000003912 LONRF3Q496Y0 759 aa11.3□□□□□ -0.6
NIPAL3-201ENST00000003912 PPP4R3CPQ6ZMV5 832 aa11.3□□□□□ -0.6
NIPAL3-201ENST00000003912 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.3□□□□□ -0.6
NIPAL3-201ENST00000003912 TEX13BQ9BXU2 312 aa11.3□□□□□ -0.6
NIPAL3-201ENST00000003912 CLIC2O15247 247 aa11.29□□□□□ -0.6
NIPAL3-201ENST00000003912 MED7O43513 233 aa11.29□□□□□ -0.6
NIPAL3-201ENST00000003912 LARGE1O95461 756 aa11.29□□□□□ -0.6
NIPAL3-201ENST00000003912 RESTQ13127 1097 aa11.29□□□□□ -0.6
NIPAL3-201ENST00000003912 TOB2Q14106 344 aaPredicted RBP11.29□□□□□ -0.6
NIPAL3-201ENST00000003912 MAN2A1Q16706 1144 aa11.29□□□□□ -0.6
NIPAL3-201ENST00000003912 SLC10A5Q5PT55 438 aa11.29□□□□□ -0.6
NIPAL3-201ENST00000003912 IFT20Q8IY31 132 aa11.29□□□□□ -0.6
NIPAL3-201ENST00000003912 TRIM58Q8NG06 486 aa11.29□□□□□ -0.6
NIPAL3-201ENST00000003912 TBC1D31Q96DN5 1066 aa11.29□□□□□ -0.6
NIPAL3-201ENST00000003912 MTMR4Q9NYA4 1195 aa11.29□□□□□ -0.6
NIPAL3-201ENST00000003912 DEPDC5O75140 1603 aa11.29□□□□□ -0.6
NIPAL3-201ENST00000003912 CETPP11597 493 aa11.29□□□□□ -0.6
NIPAL3-201ENST00000003912 TAOK1Q7L7X3 1001 aa11.29□□□□□ -0.6
NIPAL3-201ENST00000003912 TOPORSQ9NS56 1045 aaPredicted RBP11.29□□□□□ -0.6
NIPAL3-201ENST00000003912 MEGF6O75095 1541 aa11.29□□□□□ -0.6
NIPAL3-201ENST00000003912 ELF1P32519 619 aa11.29□□□□□ -0.6
NIPAL3-201ENST00000003912 HUNKP57058 714 aa11.29□□□□□ -0.6
NIPAL3-201ENST00000003912 SARNPP82979 210 aaKnown RBP11.29□□□□□ -0.6
NIPAL3-201ENST00000003912 SGMS1Q86VZ5 419 aa11.29□□□□□ -0.6
NIPAL3-201ENST00000003912 ANKRD13AQ8IZ07 590 aa11.29□□□□□ -0.6
NIPAL3-201ENST00000003912 RSAD2Q8WXG1 361 aa11.29□□□□□ -0.6
NIPAL3-201ENST00000003912 SPATA33Q96N06 139 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms