RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 Clec11aO88200 328 aa9.31□□□□□ -0.92
Trim40-203ENSMUST00000172711 PargO88622 969 aaKnown RBP9.31□□□□□ -0.92
Trim40-203ENSMUST00000172711 Syn1O88935 706 aa9.31□□□□□ -0.92
Trim40-203ENSMUST00000172711 Parp1P11103 1013 aaKnown RBP9.31□□□□□ -0.92
Trim40-203ENSMUST00000172711 Il4rP16382 810 aa9.31□□□□□ -0.92
Trim40-203ENSMUST00000172711 Mtx1P47802 317 aa9.31□□□□□ -0.92
Trim40-203ENSMUST00000172711 Mgat3Q10470 538 aa9.31□□□□□ -0.92
Trim40-203ENSMUST00000172711 P3h1Q3V1T4 739 aa9.31□□□□□ -0.92
Trim40-203ENSMUST00000172711 Pde3bQ61409 1100 aa9.31□□□□□ -0.92
Trim40-203ENSMUST00000172711 Ccp110Q7TSH4 1004 aa9.31□□□□□ -0.92
Trim40-203ENSMUST00000172711 Tmem202Q80W35 275 aa9.31□□□□□ -0.92
Trim40-203ENSMUST00000172711 Hps6Q8BLY7 805 aa9.31□□□□□ -0.92
Trim40-203ENSMUST00000172711 Nxf1Q99JX7 618 aaKnown RBP9.31□□□□□ -0.92
Trim40-203ENSMUST00000172711 Clp1Q99LI9 425 aa9.31□□□□□ -0.92
Trim40-203ENSMUST00000172711 CenpsQ9D084 142 aa9.31□□□□□ -0.92
Trim40-203ENSMUST00000172711 Tmem191cQ9JJB1 302 aa9.31□□□□□ -0.92
Trim40-203ENSMUST00000172711 Col4a6B1AVK5 1691 aa9.3□□□□□ -0.92
Trim40-203ENSMUST00000172711 Zc3h7bF8VPP8 982 aaKnown RBP9.3□□□□□ -0.92
Trim40-203ENSMUST00000172711 Rad51bO35719 350 aa9.3□□□□□ -0.92
Trim40-203ENSMUST00000172711 Cdc6O89033 562 aaKnown RBP9.3□□□□□ -0.92
Trim40-203ENSMUST00000172711 Mtco1P00397 514 aa9.3□□□□□ -0.92
Trim40-203ENSMUST00000172711 Mov10P23249 1004 aaKnown RBP9.3□□□□□ -0.92
Trim40-203ENSMUST00000172711 Bmp8aP34821 399 aa9.3□□□□□ -0.92
Trim40-203ENSMUST00000172711 Cxcl12P40224 93 aa9.3□□□□□ -0.92
Trim40-203ENSMUST00000172711 Yap1P46938 488 aa9.3□□□□□ -0.92
Trim40-203ENSMUST00000172711 Aff3P51827 1254 aa9.3□□□□□ -0.92
Trim40-203ENSMUST00000172711 Meis2P97367 477 aa9.3□□□□□ -0.92
Trim40-203ENSMUST00000172711 Rnf207Q3V3A7 635 aa9.3□□□□□ -0.92
Trim40-203ENSMUST00000172711 Cnnm4Q69ZF7 771 aa9.3□□□□□ -0.92
Trim40-203ENSMUST00000172711 Cachd1Q6PDJ1 1288 aa9.3□□□□□ -0.92
Trim40-203ENSMUST00000172711 NostrinQ6WKZ7 506 aa9.3□□□□□ -0.92
Trim40-203ENSMUST00000172711 Cyfip1Q7TMB8 1253 aa9.3□□□□□ -0.92
Trim40-203ENSMUST00000172711 Top1mtQ8R4U6 593 aa9.3□□□□□ -0.92
Trim40-203ENSMUST00000172711 Bhmt2Q91WS4 363 aa9.3□□□□□ -0.92
Trim40-203ENSMUST00000172711 Pcdhb22Q91XZ8 794 aa9.3□□□□□ -0.92
Trim40-203ENSMUST00000172711 VillQ91YD6 859 aa9.3□□□□□ -0.92
Trim40-203ENSMUST00000172711 GhdcQ99J23 532 aa9.3□□□□□ -0.92
Trim40-203ENSMUST00000172711 WtapQ9ER69 396 aa9.3□□□□□ -0.92
Trim40-203ENSMUST00000172711 Map3k20Q9ESL4 802 aaKnown RBP9.3□□□□□ -0.92
Trim40-203ENSMUST00000172711 Fbxo16Q9QZM9 334 aa9.3□□□□□ -0.92
Trim40-203ENSMUST00000172711 Irs2P81122 1321 aa9.29□□□□□ -0.92
Trim40-203ENSMUST00000172711 Rbm8a2A0A0N4SUH6 174 aa9.29□□□□□ -0.92
Trim40-203ENSMUST00000172711 Akap17bA2A3V1 959 aa9.29□□□□□ -0.92
Trim40-203ENSMUST00000172711 Dhtkd1A2ATU0 921 aa9.29□□□□□ -0.92
Trim40-203ENSMUST00000172711 Klhl33G3UW92 533 aa9.29□□□□□ -0.92
Trim40-203ENSMUST00000172711 Gm8909G3UXE9 396 aa9.29□□□□□ -0.92
Trim40-203ENSMUST00000172711 Kdelc2G5E897 503 aa9.29□□□□□ -0.92
Trim40-203ENSMUST00000172711 Gm4758L7N258 96 aa9.29□□□□□ -0.92
Trim40-203ENSMUST00000172711 Atp9aO70228 1047 aa9.29□□□□□ -0.92
Trim40-203ENSMUST00000172711 Smpd2O70572 419 aa9.29□□□□□ -0.92
Trim40-203ENSMUST00000172711 Cyp2f2P33267 491 aa9.29□□□□□ -0.92
Trim40-203ENSMUST00000172711 Pald1P70261 859 aa9.29□□□□□ -0.92
Trim40-203ENSMUST00000172711 Syce2Q505B8 171 aa9.29□□□□□ -0.92
Trim40-203ENSMUST00000172711 Cdca8Q8BHX3 289 aa9.29□□□□□ -0.92
Trim40-203ENSMUST00000172711 CerkQ8K4Q7 531 aa9.29□□□□□ -0.92
Trim40-203ENSMUST00000172711 Eml3Q8VC03 897 aa9.29□□□□□ -0.92
Trim40-203ENSMUST00000172711 Rbm8aQ9CWZ3 174 aa9.29□□□□□ -0.92
Trim40-203ENSMUST00000172711 Mettl7bQ9DD20 244 aa9.29□□□□□ -0.92
Trim40-203ENSMUST00000172711 Nkx2-4Q9EQM3 354 aa9.29□□□□□ -0.92
Trim40-203ENSMUST00000172711 Gfra4Q9JJT2 260 aa9.29□□□□□ -0.92
Trim40-203ENSMUST00000172711 Gpr37Q9QY42 600 aa9.29□□□□□ -0.92
Trim40-203ENSMUST00000172711 Mki67E9PVX6 3177 aaKnown RBP9.28□□□□□ -0.92
Trim40-203ENSMUST00000172711 Smim10l2aA0A0B4J1F8 78 aa9.28□□□□□ -0.92
Trim40-203ENSMUST00000172711 Zfp853A0A1D5RM95 733 aa9.28□□□□□ -0.92
Trim40-203ENSMUST00000172711 A0A1Y7VML8 143 aa9.28□□□□□ -0.92
Trim40-203ENSMUST00000172711 ZxdbA2CE44 873 aa9.28□□□□□ -0.92
Trim40-203ENSMUST00000172711 Wdr63B2RY71 923 aa9.28□□□□□ -0.92
Trim40-203ENSMUST00000172711 Gm29094F6Q785 221 aa9.28□□□□□ -0.92
Trim40-203ENSMUST00000172711 SfnO70456 248 aaKnown RBP9.28□□□□□ -0.92
Trim40-203ENSMUST00000172711 Gpr25P0C5I1 358 aa9.28□□□□□ -0.92
Trim40-203ENSMUST00000172711 Uri1Q3TLD5 531 aa9.28□□□□□ -0.92
Trim40-203ENSMUST00000172711 Nop58Q6DFW4 536 aaKnown RBP9.28□□□□□ -0.92
Trim40-203ENSMUST00000172711 IqceQ6PCQ0 778 aa9.28□□□□□ -0.92
Trim40-203ENSMUST00000172711 GmipQ6PGG2 971 aa9.28□□□□□ -0.92
Trim40-203ENSMUST00000172711 C6.1alQ7M757 291 aa9.28□□□□□ -0.92
Trim40-203ENSMUST00000172711 Fut11Q8BHC9 489 aa9.28□□□□□ -0.92
Trim40-203ENSMUST00000172711 Tceal5Q8CCT4 200 aa9.28□□□□□ -0.92
Trim40-203ENSMUST00000172711 Cetn4Q8K4K1 168 aa9.28□□□□□ -0.92
Trim40-203ENSMUST00000172711 Tcf25Q8R3L2 676 aaKnown RBP9.28□□□□□ -0.92
Trim40-203ENSMUST00000172711 Cdc42ep4Q9JM96 349 aaKnown RBP9.28□□□□□ -0.92
Trim40-203ENSMUST00000172711 Stk39Q9Z1W9 556 aa9.28□□□□□ -0.92
Trim40-203ENSMUST00000172711 Plxna1P70206 1894 aa9.27□□□□□ -0.93
Trim40-203ENSMUST00000172711 Cpb1B2RS76 415 aa9.27□□□□□ -0.93
Trim40-203ENSMUST00000172711 Ces1hD3Z298 562 aa9.27□□□□□ -0.93
Trim40-203ENSMUST00000172711 Gm16427J3QN52 483 aa9.27□□□□□ -0.93
Trim40-203ENSMUST00000172711 ZbbxQ0P5X5 716 aa9.27□□□□□ -0.93
Trim40-203ENSMUST00000172711 Nlrx1Q3TL44 975 aa9.27□□□□□ -0.93
Trim40-203ENSMUST00000172711 Ddr2Q62371 854 aa9.27□□□□□ -0.93
Trim40-203ENSMUST00000172711 Ifit2Q64112 472 aa9.27□□□□□ -0.93
Trim40-203ENSMUST00000172711 Kctd12bQ8C7J6 292 aa9.27□□□□□ -0.93
Trim40-203ENSMUST00000172711 Trim68Q8K243 485 aa9.27□□□□□ -0.93
Trim40-203ENSMUST00000172711 Rassf3Q99P51 232 aa9.27□□□□□ -0.93
Trim40-203ENSMUST00000172711 Nme9A0A1L1SUL6 329 aa9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 Pabpc1lA2A5N3 607 aaKnown RBP9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 Diaph1O08808 1255 aa9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 mt-Co3P00416 261 aa9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 Hoxa7P02830 229 aa9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 Bmpr1aP36895 532 aa9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 RubcnlQ3TD16 648 aa9.26□□□□□ -0.93
Trim40-203ENSMUST00000172711 Ahcyl2Q68FL4 613 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 18.5 ms