RNA–Protein interactions for RNA: ENSMUST00000161609.7

Rc3h1-202, Transcript of Roquin-1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rc3h1, Length 11,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1-202ENSMUST00000161609 Plcl1Q3USB7 1096 aa8.52□□□□□ -1.04
Rc3h1-202ENSMUST00000161609 RragaQ80X95 313 aa8.52□□□□□ -1.04
Rc3h1-202ENSMUST00000161609 Olfr390Q8VEZ7 311 aa8.52□□□□□ -1.04
Rc3h1-202ENSMUST00000161609 Eef1gQ9D8N0 437 aaKnown RBP8.52□□□□□ -1.04
Rc3h1-202ENSMUST00000161609 Gm21964A0A1W2P7S4 437 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Tbc1d25A1A5B6 742 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Tph1P17532 447 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 TecP24604 630 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 SftpbP50405 377 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Hps5P59438 1126 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Gm5935Q497S0 212 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 MtbpQ8BJS8 894 aaKnown RBP8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Dnajc3Q91YW3 504 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Egfl6Q9JJZ5 550 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 FynP39688 537 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Six5P70178 719 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Afg1lQ3V384 480 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 BollQ924M5 281 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Armc9Q9D2I5 817 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Ccdc124Q9D8X2 217 aaKnown RBP8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Serpini2Q9JK88 405 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 A0A1Y7VIU7 259 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Ube4aE9Q735 1028 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Ptk2P34152 1090 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Ptpn1P35821 432 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Rps8P62242 208 aaKnown RBP8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Zfp512bQ6PHP4 879 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Maml1Q6T264 1020 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Gatad2aQ8CHY6 629 aaKnown RBP8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Mtif3Q9CZD5 276 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Krt71Q9R0H5 524 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Irs2P81122 1321 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Slc6a21A0A1B0GSD2 748 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Akr1b1P45376 316 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Pfdn6Q03958 127 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Ccdc83Q9D4V3 305 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 RhbgQ8BUX5 455 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Ppp1r3aQ99MR9 1089 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 1700020D05RikQ99PB1 294 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Chordc1Q9D1P4 331 aaKnown RBP8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Kat2bQ9JHD1 813 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Cul1Q9WTX6 776 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Naip1Q9QWK5 1403 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 ScaperF8VQ70 1398 aaKnown RBP8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Ccdc8D3YZV8 685 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Cyp2c23E9Q5K4 494 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Syt1P46096 421 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Atp5c1Q91VR2 298 aaKnown RBP8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Pcdha11Q91Y19 950 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Abcg8Q9DBM0 673 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Mlh1Q9JK91 760 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Dhx29Q6PGC1 1365 aaKnown RBP8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Cdr2lA2A6T1 465 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 A530032D15RikE9Q422 215 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Atg16l2Q6KAU8 623 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Ush1gQ80T11 461 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Pcdhb7Q8CDY9 829 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Q922C1 641 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 A0A1Y7VML8 143 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Ephb4P54761 987 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Arf5P84084 180 aaKnown RBP8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Tfdp1Q08639 410 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Ezh2Q61188 746 aaKnown RBP8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Sptlc3Q8BG54 563 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 RnpepQ8VCT3 650 aaKnown RBP8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Tmem39aQ9CYC3 486 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 H2-OaQ9QWV1 250 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Nr1h3Q9Z0Y9 445 aa8.52□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Frmpd4A2AFR3 1320 aa8.51□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Krt24A1L317 512 aa8.51□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Stx1aO35526 288 aa8.51□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Ctnnd2O35927 1247 aa8.51□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 LmnaP48678 665 aaKnown RBP8.51□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 SkiQ60698 725 aa8.51□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 XpaQ64267 272 aa8.51□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Pramel6Q810Y9 485 aa8.51□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Colec12Q8K4Q8 742 aa8.51□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Znf445Q8R2V3 986 aa8.51□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Lrrc59Q922Q8 307 aaKnown RBP8.51□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Polr3cQ9D483 533 aa8.51□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Add2Q9QYB8 725 aa8.51□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Nme3Q9WV85 169 aa8.51□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Diaph1O08808 1255 aa8.51□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Fam91a1Q3UVG3 837 aa8.51□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Atp2a1Q8R429 994 aa8.51□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Rlbp1Q9Z275 317 aa8.51□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Smpd2O70572 419 aa8.51□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Serpinb6Q60854 378 aa8.51□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 PodnQ7TQ62 611 aa8.51□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Ces1Q8VCC2 565 aa8.51□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Atp6v0a1Q9Z1G4 839 aaKnown RBP8.51□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Slc4a2P13808 1237 aaKnown RBP8.51□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Sorbs1Q62417 1290 aa8.51□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 PoliQ6R3M4 717 aa8.51□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Tmem260Q8BMD6 703 aa8.51□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 LdhaP06151 332 aaKnown RBP8.51□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Epas1P97481 874 aa8.51□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Ankrd34bQ3UUF8 508 aa8.51□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Wdr91Q7TMQ7 748 aa8.51□□□□□ -1.05
Rc3h1-202ENSMUST00000161609 Nucks1Q80XU3 234 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 134 ms