RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Trim31Q8R0K2 507 aa19.71■□□□□ 0.75
Trim71-201ENSMUST00000111816 Shcbp1Q9Z179 668 aa19.71■□□□□ 0.75
Trim71-201ENSMUST00000111816 Csgalnact2Q8C1F4 542 aa19.71■□□□□ 0.75
Trim71-201ENSMUST00000111816 Abcg3Q99P81 650 aa19.71■□□□□ 0.75
Trim71-201ENSMUST00000111816 Lrriq4A6H6A4 596 aa19.71■□□□□ 0.75
Trim71-201ENSMUST00000111816 Gm3415J3QMS8 315 aa19.71■□□□□ 0.75
Trim71-201ENSMUST00000111816 Fra10ac1Q8BP78 315 aa19.71■□□□□ 0.75
Trim71-201ENSMUST00000111816 Spire2Q8K1S6 718 aa19.71■□□□□ 0.75
Trim71-201ENSMUST00000111816 Gm3404Q9D506 307 aa19.71■□□□□ 0.75
Trim71-201ENSMUST00000111816 Ccdc185Q3V118 621 aa19.71■□□□□ 0.75
Trim71-201ENSMUST00000111816 Tpcn2Q8BWC0 731 aa19.71■□□□□ 0.75
Trim71-201ENSMUST00000111816 Bbs7Q8K2G4 715 aa19.71■□□□□ 0.75
Trim71-201ENSMUST00000111816 Pdik1lQ8QZR7 341 aa19.71■□□□□ 0.75
Trim71-201ENSMUST00000111816 Tgif2lx2Q8K5B9 231 aa19.71■□□□□ 0.75
Trim71-201ENSMUST00000111816 Fip1l1Q9D824 581 aaKnown RBP19.71■□□□□ 0.75
Trim71-201ENSMUST00000111816 Nfe2l2Q60795 597 aa19.7■□□□□ 0.74
Trim71-201ENSMUST00000111816 Dclk2Q6PGN3 756 aa19.7■□□□□ 0.74
Trim71-201ENSMUST00000111816 NclnQ8VCM8 563 aaKnown RBP19.7■□□□□ 0.74
Trim71-201ENSMUST00000111816 Cacna1cQ01815 2139 aa19.7■□□□□ 0.74
Trim71-201ENSMUST00000111816 MaeaQ4VC33 396 aa19.7■□□□□ 0.74
Trim71-201ENSMUST00000111816 Aldh1l2Q8K009 923 aa19.7■□□□□ 0.74
Trim71-201ENSMUST00000111816 Ier5O89113 308 aa19.7■□□□□ 0.74
Trim71-201ENSMUST00000111816 Npdc1Q64322 332 aa19.7■□□□□ 0.74
Trim71-201ENSMUST00000111816 Pls3Q99K51 630 aa19.7■□□□□ 0.74
Trim71-201ENSMUST00000111816 Irx5Q9JKQ4 484 aa19.7■□□□□ 0.74
Trim71-201ENSMUST00000111816 H2afzP0C0S6 128 aa19.7■□□□□ 0.74
Trim71-201ENSMUST00000111816 Csn1s1P19228 313 aa19.7■□□□□ 0.74
Trim71-201ENSMUST00000111816 Exosc10P56960 887 aaKnown RBP19.7■□□□□ 0.74
Trim71-201ENSMUST00000111816 H2afvQ3THW5 128 aa19.7■□□□□ 0.74
Trim71-201ENSMUST00000111816 Tsta3P23591 321 aa19.7■□□□□ 0.74
Trim71-201ENSMUST00000111816 Sorbs1Q62417 1290 aa19.7■□□□□ 0.74
Trim71-201ENSMUST00000111816 Tada1Q99LM9 335 aa19.7■□□□□ 0.74
Trim71-201ENSMUST00000111816 Nol3Q9D1X0 220 aa19.7■□□□□ 0.74
Trim71-201ENSMUST00000111816 Eif4g1Q6NZJ6 1600 aaKnown RBP19.7■□□□□ 0.74
Trim71-201ENSMUST00000111816 Gm21488A0A087WR99 222 aa19.7■□□□□ 0.74
Trim71-201ENSMUST00000111816 Per2O54943 1257 aa19.7■□□□□ 0.74
Trim71-201ENSMUST00000111816 Scg2Q03517 617 aa19.7■□□□□ 0.74
Trim71-201ENSMUST00000111816 Dmc1Q61880 340 aa19.7■□□□□ 0.74
Trim71-201ENSMUST00000111816 RestQ8VIG1 1082 aa19.7■□□□□ 0.74
Trim71-201ENSMUST00000111816 Trpc7Q9WVC5 862 aa19.7■□□□□ 0.74
Trim71-201ENSMUST00000111816 A530032D15RikE9Q422 215 aa19.69■□□□□ 0.74
Trim71-201ENSMUST00000111816 Vipas39Q8BGQ1 491 aa19.69■□□□□ 0.74
Trim71-201ENSMUST00000111816 Tceal3Q8R0A5 200 aa19.69■□□□□ 0.74
Trim71-201ENSMUST00000111816 Arpp21Q9DCB4 807 aa19.69■□□□□ 0.74
Trim71-201ENSMUST00000111816 Eno3P21550 434 aa19.69■□□□□ 0.74
Trim71-201ENSMUST00000111816 Alox15P39654 663 aa19.69■□□□□ 0.74
Trim71-201ENSMUST00000111816 Lmbr1lQ9D1E5 489 aa19.69■□□□□ 0.74
Trim71-201ENSMUST00000111816 Zkscan16A2ALW2 728 aa19.69■□□□□ 0.74
Trim71-201ENSMUST00000111816 Sipa1P46062 1037 aa19.69■□□□□ 0.74
Trim71-201ENSMUST00000111816 Gsdmc4Q3TR54 480 aa19.69■□□□□ 0.74
Trim71-201ENSMUST00000111816 Vps54Q5SPW0 977 aa19.69■□□□□ 0.74
Trim71-201ENSMUST00000111816 Coq8aQ60936 645 aa19.69■□□□□ 0.74
Trim71-201ENSMUST00000111816 Prpf18Q8BM39 342 aa19.69■□□□□ 0.74
Trim71-201ENSMUST00000111816 AdarQ99MU3 1178 aaKnown RBP19.69■□□□□ 0.74
Trim71-201ENSMUST00000111816 Dnajc7Q9QYI3 494 aa19.69■□□□□ 0.74
Trim71-201ENSMUST00000111816 Gm4869A0A1B0GSG7 984 aa19.69■□□□□ 0.74
Trim71-201ENSMUST00000111816 Fam47eD3YWC7 402 aa19.69■□□□□ 0.74
Trim71-201ENSMUST00000111816 Gm8897L7N294 181 aa19.69■□□□□ 0.74
Trim71-201ENSMUST00000111816 SympkQ80X82 1284 aa19.69■□□□□ 0.74
Trim71-201ENSMUST00000111816 C1qtnf1Q9QXP7 281 aa19.69■□□□□ 0.74
Trim71-201ENSMUST00000111816 Sox6P40645 827 aa19.69■□□□□ 0.74
Trim71-201ENSMUST00000111816 Znf652Q5DU09 608 aa19.69■□□□□ 0.74
Trim71-201ENSMUST00000111816 Hacd3Q8K2C9 362 aa19.69■□□□□ 0.74
Trim71-201ENSMUST00000111816 Med7Q9CZB6 233 aa19.69■□□□□ 0.74
Trim71-201ENSMUST00000111816 Tmod1P49813 359 aa19.69■□□□□ 0.74
Trim71-201ENSMUST00000111816 Serpina1cQ00896 412 aa19.69■□□□□ 0.74
Trim71-201ENSMUST00000111816 Serpina1dQ00897 413 aa19.69■□□□□ 0.74
Trim71-201ENSMUST00000111816 IarsQ8BU30 1262 aa19.69■□□□□ 0.74
Trim71-201ENSMUST00000111816 Trap1Q9CQN1 706 aaKnown RBP19.69■□□□□ 0.74
Trim71-201ENSMUST00000111816 Slc12a7Q9WVL3 1083 aa19.69■□□□□ 0.74
Trim71-201ENSMUST00000111816 SptbP15508 2128 aa19.69■□□□□ 0.74
Trim71-201ENSMUST00000111816 Gm5861F6VCN9 180 aa19.68■□□□□ 0.74
Trim71-201ENSMUST00000111816 4933402N22RikF7D1B3 190 aa19.68■□□□□ 0.74
Trim71-201ENSMUST00000111816 Exoc7O35250 697 aa19.68■□□□□ 0.74
Trim71-201ENSMUST00000111816 Zfp644E9QA22 1323 aa19.68■□□□□ 0.74
Trim71-201ENSMUST00000111816 Serpina1aP07758 413 aa19.68■□□□□ 0.74
Trim71-201ENSMUST00000111816 Trpd52l3Q9CQ14 231 aa19.68■□□□□ 0.74
Trim71-201ENSMUST00000111816 Aldh18a1Q9Z110 795 aa19.68■□□□□ 0.74
Trim71-201ENSMUST00000111816 Axin2O88566 840 aa19.68■□□□□ 0.74
Trim71-201ENSMUST00000111816 Eif2s1Q6ZWX6 315 aaKnown RBP19.68■□□□□ 0.74
Trim71-201ENSMUST00000111816 Sorbs3Q9R1Z8 733 aa19.68■□□□□ 0.74
Trim71-201ENSMUST00000111816 Naip1Q9QWK5 1403 aa19.68■□□□□ 0.74
Trim71-201ENSMUST00000111816 Snrpa1P57784 255 aaKnown RBP19.68■□□□□ 0.74
Trim71-201ENSMUST00000111816 Pex5lQ8C437 567 aa19.68■□□□□ 0.74
Trim71-201ENSMUST00000111816 Eme2Q56A04 373 aa19.68■□□□□ 0.74
Trim71-201ENSMUST00000111816 Wbp4Q61048 376 aa19.68■□□□□ 0.74
Trim71-201ENSMUST00000111816 Cabp7Q91ZM8 215 aa19.68■□□□□ 0.74
Trim71-201ENSMUST00000111816 Sdr42e1Q9D665 394 aa19.68■□□□□ 0.74
Trim71-201ENSMUST00000111816 Tceal6Q9DB24 200 aa19.68■□□□□ 0.74
Trim71-201ENSMUST00000111816 Ankrd27Q3UMR0 1048 aa19.68■□□□□ 0.74
Trim71-201ENSMUST00000111816 Nars2Q8BGV0 477 aa19.68■□□□□ 0.74
Trim71-201ENSMUST00000111816 6820408C15RikQ8BJX2 354 aa19.68■□□□□ 0.74
Trim71-201ENSMUST00000111816 IdeQ9JHR7 1019 aa19.68■□□□□ 0.74
Trim71-201ENSMUST00000111816 Fads3Q9JJE7 449 aa19.68■□□□□ 0.74
Trim71-201ENSMUST00000111816 Mpp2Q9WV34 552 aa19.68■□□□□ 0.74
Trim71-201ENSMUST00000111816 Ssh2Q5SW75 1423 aa19.67■□□□□ 0.74
Trim71-201ENSMUST00000111816 Card9A2AIV8 536 aa19.67■□□□□ 0.74
Trim71-201ENSMUST00000111816 Gm3755K7N743 167 aa19.67■□□□□ 0.74
Trim71-201ENSMUST00000111816 Grk4O70291 574 aa19.67■□□□□ 0.74
Trim71-201ENSMUST00000111816 Psmb9P28076 219 aa19.67■□□□□ 0.74
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms