RNA–Protein interactions for RNA: ENSMUST00000069187.11

Trim23-203, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

TSL 1 (best) BASIC

Gene Trim23, Length 3,546 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-203ENSMUST00000069187 LdhdQ7TNG8 484 aa12.54□□□□□ -0.4
Trim23-203ENSMUST00000069187 Pwp2Q8BU03 919 aaKnown RBP12.54□□□□□ -0.4
Trim23-203ENSMUST00000069187 Camkk2Q8C078 588 aa12.54□□□□□ -0.4
Trim23-203ENSMUST00000069187 PreplQ8C167 725 aa12.54□□□□□ -0.4
Trim23-203ENSMUST00000069187 ErmapQ9JLN5 566 aa12.54□□□□□ -0.4
Trim23-203ENSMUST00000069187 Exoc4O35382 975 aa12.53□□□□□ -0.4
Trim23-203ENSMUST00000069187 Klc1O88447 541 aa12.53□□□□□ -0.4
Trim23-203ENSMUST00000069187 Ptpn12P35831 775 aa12.53□□□□□ -0.4
Trim23-203ENSMUST00000069187 Haus6Q6NV99 933 aaKnown RBP12.53□□□□□ -0.4
Trim23-203ENSMUST00000069187 Asic3Q6X1Y6 530 aa12.53□□□□□ -0.4
Trim23-203ENSMUST00000069187 Fmnl3Q6ZPF4 1028 aa12.53□□□□□ -0.4
Trim23-203ENSMUST00000069187 Mettl5Q8K1A0 209 aa12.53□□□□□ -0.4
Trim23-203ENSMUST00000069187 Matr3Q8K310 846 aaKnown RBP12.53□□□□□ -0.4
Trim23-203ENSMUST00000069187 FktnQ8R507 461 aa12.53□□□□□ -0.4
Trim23-203ENSMUST00000069187 Ddx47Q9CWX9 455 aaKnown RBP12.53□□□□□ -0.4
Trim23-203ENSMUST00000069187 Nop56Q9D6Z1 580 aaKnown RBP12.53□□□□□ -0.4
Trim23-203ENSMUST00000069187 Eid1Q9DCR4 169 aa12.53□□□□□ -0.4
Trim23-203ENSMUST00000069187 Proca1B0QZF7 307 aa12.53□□□□□ -0.4
Trim23-203ENSMUST00000069187 Pkn1P70268 946 aa12.53□□□□□ -0.4
Trim23-203ENSMUST00000069187 NyxP83503 476 aa12.53□□□□□ -0.4
Trim23-203ENSMUST00000069187 Atp11aP98197 1187 aa12.53□□□□□ -0.4
Trim23-203ENSMUST00000069187 WaplQ65Z40 1200 aaKnown RBP12.53□□□□□ -0.4
Trim23-203ENSMUST00000069187 PodnQ7TQ62 611 aa12.53□□□□□ -0.4
Trim23-203ENSMUST00000069187 Ccdc122Q8BVN0 290 aa12.53□□□□□ -0.4
Trim23-203ENSMUST00000069187 Kbtbd13Q8C828 458 aa12.53□□□□□ -0.4
Trim23-203ENSMUST00000069187 Cdan1Q8CC12 1239 aa12.53□□□□□ -0.4
Trim23-203ENSMUST00000069187 Slf1Q8R3P9 1054 aa12.53□□□□□ -0.4
Trim23-203ENSMUST00000069187 Plagl2Q925T4 496 aa12.53□□□□□ -0.4
Trim23-203ENSMUST00000069187 1700109H08RikQ9D9C0 210 aa12.53□□□□□ -0.4
Trim23-203ENSMUST00000069187 Tlr9Q9EQU3 1032 aa12.53□□□□□ -0.4
Trim23-203ENSMUST00000069187 Pcdh11xF6ZNL5 1338 aa12.53□□□□□ -0.4
Trim23-203ENSMUST00000069187 Pitpnm2Q6ZPQ6 1335 aa12.53□□□□□ -0.4
Trim23-203ENSMUST00000069187 AfdnQ9QZQ1 1820 aaKnown RBP12.53□□□□□ -0.4
Trim23-203ENSMUST00000069187 Stag2O35638 1231 aa12.53□□□□□ -0.4
Trim23-203ENSMUST00000069187 Vcam1P29533 739 aa12.53□□□□□ -0.4
Trim23-203ENSMUST00000069187 Cyfip2Q5SQX6 1253 aa12.53□□□□□ -0.4
Trim23-203ENSMUST00000069187 Specc1Q5SXY1 1067 aa12.53□□□□□ -0.4
Trim23-203ENSMUST00000069187 Nlrp4fQ66X05 959 aa12.53□□□□□ -0.4
Trim23-203ENSMUST00000069187 Zbtb39Q6PDK0 712 aa12.53□□□□□ -0.4
Trim23-203ENSMUST00000069187 GypcQ78HU7 95 aa12.53□□□□□ -0.4
Trim23-203ENSMUST00000069187 Nod2Q8K3Z0 1020 aa12.53□□□□□ -0.4
Trim23-203ENSMUST00000069187 Mtmr4Q91XS1 1190 aa12.53□□□□□ -0.4
Trim23-203ENSMUST00000069187 Lzts2Q91YU6 671 aa12.53□□□□□ -0.4
Trim23-203ENSMUST00000069187 Ccdc43Q9CR29 222 aaKnown RBP12.53□□□□□ -0.4
Trim23-203ENSMUST00000069187 Zbed3Q9D0L1 228 aa12.53□□□□□ -0.4
Trim23-203ENSMUST00000069187 Efhd1Q9D4J1 240 aa12.53□□□□□ -0.4
Trim23-203ENSMUST00000069187 Tnnc1P19123 161 aa12.52□□□□□ -0.4
Trim23-203ENSMUST00000069187 Serpina1bP22599 413 aa12.52□□□□□ -0.4
Trim23-203ENSMUST00000069187 MarcksP26645 309 aaKnown RBP12.52□□□□□ -0.4
Trim23-203ENSMUST00000069187 Qrich1Q3UA37 777 aa12.52□□□□□ -0.4
Trim23-203ENSMUST00000069187 Tbc1d9bQ5SVR0 1263 aa12.52□□□□□ -0.4
Trim23-203ENSMUST00000069187 Vil1Q62468 827 aa12.52□□□□□ -0.4
Trim23-203ENSMUST00000069187 Mettl25Q6NXH8 597 aa12.52□□□□□ -0.4
Trim23-203ENSMUST00000069187 Zic5Q7TQ40 622 aa12.52□□□□□ -0.4
Trim23-203ENSMUST00000069187 Cnot10Q8BH15 744 aa12.52□□□□□ -0.4
Trim23-203ENSMUST00000069187 Tfap4Q9JIZ5 338 aa12.52□□□□□ -0.4
Trim23-203ENSMUST00000069187 Tob2Q9JM55 345 aa12.52□□□□□ -0.4
Trim23-203ENSMUST00000069187 Col5a2Q3U962 1497 aa12.52□□□□□ -0.4
Trim23-203ENSMUST00000069187 Sap30bpQ02614 308 aa12.52□□□□□ -0.41
Trim23-203ENSMUST00000069187 Txndc16Q7TN22 820 aa12.52□□□□□ -0.41
Trim23-203ENSMUST00000069187 Gga3Q8BMI3 718 aa12.52□□□□□ -0.41
Trim23-203ENSMUST00000069187 Q91WD4 421 aa12.52□□□□□ -0.41
Trim23-203ENSMUST00000069187 Ly6iQ9WU67 134 aa12.52□□□□□ -0.41
Trim23-203ENSMUST00000069187 Zfp781Q0P5U5 243 aa12.51□□□□□ -0.41
Trim23-203ENSMUST00000069187 Hdhd2Q3UGR5 259 aa12.51□□□□□ -0.41
Trim23-203ENSMUST00000069187 Usp17leQ7M764 540 aa12.51□□□□□ -0.41
Trim23-203ENSMUST00000069187 Cep104Q80V31 926 aa12.51□□□□□ -0.41
Trim23-203ENSMUST00000069187 Cyp4f39Q8BGU0 532 aa12.51□□□□□ -0.41
Trim23-203ENSMUST00000069187 Znf131Q8K3J5 619 aa12.51□□□□□ -0.41
Trim23-203ENSMUST00000069187 Eps8l2Q99K30 729 aa12.51□□□□□ -0.41
Trim23-203ENSMUST00000069187 Borcs6Q9D6W8 360 aa12.51□□□□□ -0.41
Trim23-203ENSMUST00000069187 Eef1gQ9D8N0 437 aaKnown RBP12.51□□□□□ -0.41
Trim23-203ENSMUST00000069187 Zswim8Q3UHH1 1832 aaKnown RBP12.51□□□□□ -0.41
Trim23-203ENSMUST00000069187 Kiaa1522A2A7S8 1013 aa12.51□□□□□ -0.41
Trim23-203ENSMUST00000069187 RaraP11416 462 aa12.51□□□□□ -0.41
Trim23-203ENSMUST00000069187 Wnt7aP24383 349 aa12.51□□□□□ -0.41
Trim23-203ENSMUST00000069187 Hspa9P38647 679 aaKnown RBP12.51□□□□□ -0.41
Trim23-203ENSMUST00000069187 Cap1P40124 474 aa12.51□□□□□ -0.41
Trim23-203ENSMUST00000069187 Cep70Q6IQY5 616 aa12.51□□□□□ -0.41
Trim23-203ENSMUST00000069187 Gjd4Q8BSD4 364 aa12.51□□□□□ -0.41
Trim23-203ENSMUST00000069187 Exoc1Q8R3S6 894 aa12.51□□□□□ -0.41
Trim23-203ENSMUST00000069187 Prpf4Q9DAW6 521 aaKnown RBP12.51□□□□□ -0.41
Trim23-203ENSMUST00000069187 Cmtr1Q9DBC3 837 aa12.51□□□□□ -0.41
Trim23-203ENSMUST00000069187 Tmod2Q9JKK7 351 aa12.51□□□□□ -0.41
Trim23-203ENSMUST00000069187 Net1Q9Z206 595 aa12.51□□□□□ -0.41
Trim23-203ENSMUST00000069187 Rgs9bpQ148R9 237 aa12.51□□□□□ -0.41
Trim23-203ENSMUST00000069187 Slc9a2Q3ZAS0 814 aa12.51□□□□□ -0.41
Trim23-203ENSMUST00000069187 Kdm1aQ6ZQ88 853 aa12.51□□□□□ -0.41
Trim23-203ENSMUST00000069187 Ppp1r11Q8K1L5 131 aa12.51□□□□□ -0.41
Trim23-203ENSMUST00000069187 Chd5A2A8L1 1946 aa12.51□□□□□ -0.41
Trim23-203ENSMUST00000069187 Gm4307E9PZY4 289 aa12.5□□□□□ -0.41
Trim23-203ENSMUST00000069187 Gm4312K9J7E2 289 aa12.5□□□□□ -0.41
Trim23-203ENSMUST00000069187 Copb2O55029 905 aa12.5□□□□□ -0.41
Trim23-203ENSMUST00000069187 Parp1P11103 1013 aaKnown RBP12.5□□□□□ -0.41
Trim23-203ENSMUST00000069187 Hmgb1P63158 215 aaKnown RBP12.5□□□□□ -0.41
Trim23-203ENSMUST00000069187 GmpsQ3THK7 693 aa12.5□□□□□ -0.41
Trim23-203ENSMUST00000069187 Skap2Q3UND0 358 aa12.5□□□□□ -0.41
Trim23-203ENSMUST00000069187 Rhpn1Q61085 643 aa12.5□□□□□ -0.41
Trim23-203ENSMUST00000069187 Exoc3Q6KAR6 755 aa12.5□□□□□ -0.41
Trim23-203ENSMUST00000069187 Pip5kl1Q6U7H8 395 aa12.5□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 26.4 ms