RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Rcor2Q8C796 523 aa12.84□□□□□ -0.35
Trim56-201ENSMUST00000054384 Atad2Q8CDM1 1040 aa12.84□□□□□ -0.35
Trim56-201ENSMUST00000054384 KynuQ9CXF0 464 aa12.84□□□□□ -0.35
Trim56-201ENSMUST00000054384 Pdzd9Q9D9M4 266 aa12.84□□□□□ -0.35
Trim56-201ENSMUST00000054384 Gad1P48318 593 aa12.83□□□□□ -0.35
Trim56-201ENSMUST00000054384 Rps6ka5Q8C050 863 aa12.83□□□□□ -0.35
Trim56-201ENSMUST00000054384 Pdik1lQ8QZR7 341 aa12.83□□□□□ -0.36
Trim56-201ENSMUST00000054384 Dach2Q925Q8 634 aa12.83□□□□□ -0.36
Trim56-201ENSMUST00000054384 Pold4Q9CWP8 107 aa12.83□□□□□ -0.36
Trim56-201ENSMUST00000054384 Cbx6Q9DBY5 414 aa12.83□□□□□ -0.36
Trim56-201ENSMUST00000054384 Gtf2iQ9ESZ8 998 aaKnown RBP12.83□□□□□ -0.36
Trim56-201ENSMUST00000054384 Syde2E9PUP1 1314 aa12.83□□□□□ -0.36
Trim56-201ENSMUST00000054384 PtprgQ05909 1442 aa12.83□□□□□ -0.36
Trim56-201ENSMUST00000054384 AnkarA2RT91 1465 aa12.83□□□□□ -0.36
Trim56-201ENSMUST00000054384 Il7P10168 154 aa12.83□□□□□ -0.36
Trim56-201ENSMUST00000054384 Slc12a1P55014 1095 aa12.83□□□□□ -0.36
Trim56-201ENSMUST00000054384 Hipk4Q3V016 616 aa12.83□□□□□ -0.36
Trim56-201ENSMUST00000054384 RimklbQ80WS1 387 aa12.83□□□□□ -0.36
Trim56-201ENSMUST00000054384 Parp14Q2EMV9 1817 aa12.83□□□□□ -0.36
Trim56-201ENSMUST00000054384 Serpinb3dQ6UKZ0 387 aa12.83□□□□□ -0.36
Trim56-201ENSMUST00000054384 C2cd5Q7TPS5 1016 aaKnown RBP12.83□□□□□ -0.36
Trim56-201ENSMUST00000054384 Ctdspl2Q8BG15 465 aa12.83□□□□□ -0.36
Trim56-201ENSMUST00000054384 LzicQ8K3C3 190 aa12.83□□□□□ -0.36
Trim56-201ENSMUST00000054384 Eif2ak1Q9Z2R9 619 aa12.83□□□□□ -0.36
Trim56-201ENSMUST00000054384 Uhrf1bp1lA2RSJ4 1457 aa12.83□□□□□ -0.36
Trim56-201ENSMUST00000054384 Map3k19E9Q3S4 1311 aa12.83□□□□□ -0.36
Trim56-201ENSMUST00000054384 Supt3B0QZW4 406 aa12.83□□□□□ -0.36
Trim56-201ENSMUST00000054384 Setd3Q91WC0 594 aa12.83□□□□□ -0.36
Trim56-201ENSMUST00000054384 Nrbp1Q99J45 535 aa12.83□□□□□ -0.36
Trim56-201ENSMUST00000054384 Bzw1Q9CQC6 419 aaKnown RBP12.83□□□□□ -0.36
Trim56-201ENSMUST00000054384 Nde1Q9CZA6 344 aa12.83□□□□□ -0.36
Trim56-201ENSMUST00000054384 Clasp1Q80TV8 1535 aaKnown RBP12.83□□□□□ -0.36
Trim56-201ENSMUST00000054384 Ttc41Q692V3 1318 aa12.83□□□□□ -0.36
Trim56-201ENSMUST00000054384 1700113H08RikE9Q9Q5 327 aa12.83□□□□□ -0.36
Trim56-201ENSMUST00000054384 DffaO54786 331 aa12.83□□□□□ -0.36
Trim56-201ENSMUST00000054384 Fdx1P46656 188 aa12.83□□□□□ -0.36
Trim56-201ENSMUST00000054384 HiraQ61666 1015 aa12.83□□□□□ -0.36
Trim56-201ENSMUST00000054384 Gprasp2Q8BUY8 826 aa12.83□□□□□ -0.36
Trim56-201ENSMUST00000054384 Dnm3Q8BZ98 863 aa12.83□□□□□ -0.36
Trim56-201ENSMUST00000054384 Plekha4Q8VC98 588 aa12.83□□□□□ -0.36
Trim56-201ENSMUST00000054384 Calr3Q9D9Q6 380 aa12.83□□□□□ -0.36
Trim56-201ENSMUST00000054384 Syngap1F6SEU4 1340 aa12.83□□□□□ -0.36
Trim56-201ENSMUST00000054384 Ccdc24E9PUW8 296 aa12.83□□□□□ -0.36
Trim56-201ENSMUST00000054384 Stam2O88811 523 aa12.83□□□□□ -0.36
Trim56-201ENSMUST00000054384 MybP06876 636 aa12.83□□□□□ -0.36
Trim56-201ENSMUST00000054384 DSCC1Q14AI0 399 aa12.83□□□□□ -0.36
Trim56-201ENSMUST00000054384 Tmcc1Q69ZZ6 649 aa12.83□□□□□ -0.36
Trim56-201ENSMUST00000054384 Wars2Q9CYK1 360 aa12.83□□□□□ -0.36
Trim56-201ENSMUST00000054384 Cpsf1Q9EPU4 1441 aaKnown RBP12.82□□□□□ -0.36
Trim56-201ENSMUST00000054384 Nccrp1G3X9C2 266 aa12.82□□□□□ -0.36
Trim56-201ENSMUST00000054384 Zfp408H7BX78 710 aa12.82□□□□□ -0.36
Trim56-201ENSMUST00000054384 Zbtb38Q3LR78 1197 aa12.82□□□□□ -0.36
Trim56-201ENSMUST00000054384 Ttll1Q91V51 423 aa12.82□□□□□ -0.36
Trim56-201ENSMUST00000054384 Rbm42Q91V81 474 aaKnown RBP12.82□□□□□ -0.36
Trim56-201ENSMUST00000054384 Crlf3Q9Z2L7 442 aa12.82□□□□□ -0.36
Trim56-201ENSMUST00000054384 Krt1P04104 637 aa12.82□□□□□ -0.36
Trim56-201ENSMUST00000054384 Ext2P70428 718 aa12.82□□□□□ -0.36
Trim56-201ENSMUST00000054384 Mysm1Q69Z66 819 aa12.82□□□□□ -0.36
Trim56-201ENSMUST00000054384 NpatQ8BMA5 1420 aa12.82□□□□□ -0.36
Trim56-201ENSMUST00000054384 Syt2P46097 422 aa12.82□□□□□ -0.36
Trim56-201ENSMUST00000054384 Ubxn11Q9D572 484 aa12.82□□□□□ -0.36
Trim56-201ENSMUST00000054384 Gm29133A0A1B0GT72 266 aa12.82□□□□□ -0.36
Trim56-201ENSMUST00000054384 Ccdc85cE9Q6B2 420 aa12.82□□□□□ -0.36
Trim56-201ENSMUST00000054384 Sept2P42208 361 aaKnown RBP12.82□□□□□ -0.36
Trim56-201ENSMUST00000054384 Madcam1Q61826 405 aa12.82□□□□□ -0.36
Trim56-201ENSMUST00000054384 Aox2Q5SGK3 1345 aa12.82□□□□□ -0.36
Trim56-201ENSMUST00000054384 Lzts3A2AHG0 700 aa12.82□□□□□ -0.36
Trim56-201ENSMUST00000054384 Apol6B7ZC55 329 aa12.82□□□□□ -0.36
Trim56-201ENSMUST00000054384 Myl1P05977 188 aa12.82□□□□□ -0.36
Trim56-201ENSMUST00000054384 Ankrd42Q3V096 527 aa12.82□□□□□ -0.36
Trim56-201ENSMUST00000054384 Ap2b1Q9DBG3 937 aa12.82□□□□□ -0.36
Trim56-201ENSMUST00000054384 Dok7Q18PE0 504 aa12.82□□□□□ -0.36
Trim56-201ENSMUST00000054384 Gm3414Q3TNU4 584 aa12.82□□□□□ -0.36
Trim56-201ENSMUST00000054384 Afg3l1Q920A7 789 aaKnown RBP12.82□□□□□ -0.36
Trim56-201ENSMUST00000054384 Efcab6Q6P1E8 1516 aa12.82□□□□□ -0.36
Trim56-201ENSMUST00000054384 Klhl34A2AI76 644 aa12.81□□□□□ -0.36
Trim56-201ENSMUST00000054384 Nova2D3YVV7 556 aaKnown RBP12.81□□□□□ -0.36
Trim56-201ENSMUST00000054384 Pkp1P97350 728 aaKnown RBP12.81□□□□□ -0.36
Trim56-201ENSMUST00000054384 Ehd2Q8BH64 543 aa12.81□□□□□ -0.36
Trim56-201ENSMUST00000054384 Arl2bpQ9D385 163 aa12.81□□□□□ -0.36
Trim56-201ENSMUST00000054384 Abca5Q8K448 1642 aa12.81□□□□□ -0.36
Trim56-201ENSMUST00000054384 Lsg1Q3UM18 644 aaKnown RBP12.81□□□□□ -0.36
Trim56-201ENSMUST00000054384 Arhgef9Q3UTH8 516 aa12.81□□□□□ -0.36
Trim56-201ENSMUST00000054384 Sult1d1Q3UZZ6 295 aa12.81□□□□□ -0.36
Trim56-201ENSMUST00000054384 Islr2Q5RKR3 745 aa12.81□□□□□ -0.36
Trim56-201ENSMUST00000054384 Avpr1aQ62463 423 aa12.81□□□□□ -0.36
Trim56-201ENSMUST00000054384 Skiv2lQ6NZR5 1244 aa12.81□□□□□ -0.36
Trim56-201ENSMUST00000054384 Abtb1Q99LJ2 478 aa12.81□□□□□ -0.36
Trim56-201ENSMUST00000054384 Zcchc17Q9ESX4 241 aaKnown RBP12.81□□□□□ -0.36
Trim56-201ENSMUST00000054384 GsdmeQ9Z2D3 512 aa12.81□□□□□ -0.36
Trim56-201ENSMUST00000054384 Hspa4lP48722 838 aa12.81□□□□□ -0.36
Trim56-201ENSMUST00000054384 Llgl2Q3TJ91 1027 aa12.81□□□□□ -0.36
Trim56-201ENSMUST00000054384 Slc44a1Q6X893 653 aa12.81□□□□□ -0.36
Trim56-201ENSMUST00000054384 Cog5Q8C0L8 829 aa12.81□□□□□ -0.36
Trim56-201ENSMUST00000054384 Pm20d1Q8C165 503 aa12.81□□□□□ -0.36
Trim56-201ENSMUST00000054384 Eif4a3Q91VC3 411 aaKnown RBP12.81□□□□□ -0.36
Trim56-201ENSMUST00000054384 Gimap4Q99JY3 219 aa12.81□□□□□ -0.36
Trim56-201ENSMUST00000054384 Gps1Q99LD4 471 aaKnown RBP12.81□□□□□ -0.36
Trim56-201ENSMUST00000054384 Speer4eK7N6S8 255 aa12.81□□□□□ -0.36
Trim56-201ENSMUST00000054384 Ap1m1P35585 423 aa12.81□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 10.9 ms