RNA–Protein interactions for RNA: ENSMUST00000053414.12

Ccdc171-201, Transcript of Coiled-coil domain-containing protein 171, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Ccdc171, Length 4,525 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc171-201ENSMUST00000053414 Hdac9Q99N13 588 aa10.08□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Apol8A2VDH7 339 aaKnown RBP10.08□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Gm7347D3YYI9 267 aa10.08□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Speer4aF8VPX6 267 aa10.08□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 PpardP35396 440 aa10.08□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Grm6Q5NCH9 871 aa10.08□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Brsk2Q69Z98 735 aa10.08□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 H6pdQ8CFX1 789 aa10.08□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Cwf19l1Q8CI33 537 aa10.08□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Riok1Q922Q2 567 aa10.08□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 4930449I24RikQ9D5E3 319 aa10.08□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Spata1Q9D5R4 444 aa10.08□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Znf394Q9Z1D9 521 aa10.08□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Krt78E9Q0F0 1068 aa10.08□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Tcp1P11983 556 aaKnown RBP10.08□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Cyp2b9P12790 491 aa10.08□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Vps33bP59016 617 aa10.08□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 RgmbQ7TQ33 436 aa10.08□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 GlmnQ8BZM1 596 aa10.08□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Spata2Q8K004 515 aa10.08□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Rhobtb3Q9CTN4 611 aa10.08□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Dph5Q9CWQ0 281 aa10.08□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Dock2Q8C3J5 1828 aa10.08□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Creb1Q01147 341 aaKnown RBP10.08□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Cyb5d1Q5NCY3 228 aa10.08□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Specc1Q5SXY1 1067 aa10.08□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Lilrb4Q64281 335 aa10.08□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Asic3Q6X1Y6 530 aa10.08□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Pja2Q80U04 707 aa10.08□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Man2a2Q8BRK9 1152 aa10.08□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 GlyctkQ8QZY2 523 aa10.08□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Dydc2Q9D3X8 139 aa10.08□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 WtapQ9ER69 396 aa10.08□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Itga9B8JK39 1036 aa10.07□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Casp8O89110 480 aa10.07□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Znf827Q505G8 1078 aa10.07□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Slc51bQ80WK2 128 aa10.07□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Ubap1Q8BH48 502 aa10.07□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 SarnpQ9D1J3 210 aaKnown RBP10.07□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Lonrf3Q9D4H7 753 aa10.07□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Rabgef1Q9JM13 491 aa10.07□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Usp14Q9JMA1 493 aaKnown RBP10.07□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Psma7Q9Z2U0 248 aa10.07□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 PctpP53808 214 aa10.07□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Rbm46P86049 533 aa10.07□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Tom1l2Q5SRX1 507 aa10.07□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Trpc6Q61143 930 aa10.07□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Ccdc181Q80ZU5 509 aa10.07□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Psma8Q9CWH6 250 aa10.07□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Rnaseh2aQ9CWY8 301 aa10.07□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Rasgef1cQ9D300 466 aa10.07□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Apol6B7ZC55 329 aa10.07□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Gm5934D3Z4U6 212 aa10.07□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 KhsrpQ3U0V1 748 aaKnown RBP10.07□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Trim80Q3V061 624 aa10.07□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 MaeaQ4VC33 396 aa10.07□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 ChukQ60680 745 aa10.07□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Slc9a1Q61165 820 aa10.07□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Kcnj11Q61743 390 aa10.07□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Miga2Q8BK03 593 aa10.07□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 FsbpQ8BKE5 299 aa10.07□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Dusp19Q8K4T5 220 aa10.07□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Slc35f6Q8VE96 372 aa10.07□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Ier5lQ99J55 406 aa10.07□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 1700013D24RikQ0P521 120 aa10.06□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Cnga2Q62398 664 aa10.06□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Tsga10Q6NY15 697 aa10.06□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Celf4Q7TSY6 486 aa10.06□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Sec24bQ80ZX0 1251 aa10.06□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Znf428Q8C1M2 176 aa10.06□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Inpp4aQ9EPW0 939 aa10.06□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Mpp2Q9WV34 552 aa10.06□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Foxo4Q9WVH3 505 aa10.06□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 GzmgP13366 248 aa10.06□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Cacna2d4Q5RJF7 1116 aa10.06□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 NfrkbQ6PIJ4 1296 aaKnown RBP10.06□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Tlr13Q6R5N8 991 aa10.06□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Epn2Q8CHU3 595 aa10.06□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Fermt2Q8CIB5 680 aa10.06□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 PhykplQ8R1K4 467 aa10.06□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Ranbp17Q99NF8 1088 aa10.06□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Fam133bQ9CVI2 245 aaKnown RBP10.06□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Pramef12Q9D2F1 463 aa10.06□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 3830403N18RikQ9D6C3 208 aa10.06□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Adgra3Q7TT36 1310 aa10.06□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Gm15262A0A140LIQ5 728 aa10.06□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Pfkfb3A7UAK5 555 aa10.06□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Scgb2b7D3YYY1 112 aa10.06□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Gm10378F6XQQ1 160 aa10.06□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Magea8O89012 320 aa10.06□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Slc38a10Q5I012 1090 aa10.06□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Rgl2Q61193 778 aa10.06□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Ppp2r2aQ6P1F6 447 aa10.06□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Rint1Q8BZ36 792 aa10.06□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Nsmce1Q9D720 266 aa10.06□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Stag2O35638 1231 aa10.06□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 D1Pas1P16381 660 aa10.06□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 MagohP61327 146 aaKnown RBP10.06□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Myo19Q5SV80 963 aa10.06□□□□□ -0.8
Ccdc171-201ENSMUST00000053414 Dlg1Q811D0 905 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 16.5 ms