RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Slc40a1Q9JHI9 570 aa20.93■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Men1O88559 611 aaKnown RBP20.93■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Becn2P0DM65 447 aa20.93■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 VrtnQ3SYK4 740 aa20.93■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Pde1cQ64338 706 aa20.93■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Ttc22Q8C159 568 aa20.93■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Arfgap2Q99K28 520 aa20.93■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Erp44Q9D1Q6 406 aa20.93■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Dydc2Q9D3X8 139 aa20.93■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Trpc5Q9QX29 975 aa20.93■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Togaram1Q6A070 1776 aaKnown RBP20.92■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Btbd18A0A0A6YY25 723 aa20.92■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 DnttP09838 530 aa20.92■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 FechP22315 420 aaKnown RBP20.92■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Hspa9P38647 679 aaKnown RBP20.92■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Rgs9bpQ148R9 237 aa20.92■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Cracr2aQ3UP38 310 aa20.92■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Ccpg1Q640L3 753 aa20.92■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 March6Q6ZQ89 909 aa20.92■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Rassf10Q8BL43 508 aa20.92■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Usp38Q8BW70 1042 aa20.92■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Arhgef19Q8BWA8 802 aa20.92■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Ccdc186Q8C9S4 917 aa20.92■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 OplahQ8K010 1288 aa20.92■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Bbs7Q8K2G4 715 aa20.92■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Znrd1-asQ8R0E5 213 aa20.92■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Gps2Q921N8 327 aa20.92■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Kremen1Q99N43 473 aa20.92■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Adgrf5G5E8Q8 1348 aa20.92■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Gm30191A0A0U1RNT7 187 aa20.92■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Lrrc32G3XA59 663 aa20.92■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Actn4P57780 912 aaKnown RBP20.92■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 1810065E05RikQ5NC41 235 aa20.92■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Lrrc41Q8K1C9 807 aa20.92■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Nup58Q8R332 587 aa20.92■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Asic2Q925H0 512 aa20.92■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Krtap5-3Q9D226 196 aa20.92■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Akap8Q9DBR0 687 aaKnown RBP20.92■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Trmt112Q9DCG9 125 aa20.92■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Actn2Q9JI91 894 aa20.92■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Cul1Q9WTX6 776 aa20.92■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Slfn14V9GXG1 899 aa20.92■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Setd4P58467 439 aa20.91■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Agxt2Q3UEG6 513 aa20.91■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Rnpc3Q3UZ01 514 aaKnown RBP20.91■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Asap3Q5U464 904 aa20.91■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Rhbdf1Q6PIX5 856 aa20.91■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Nap1l4Q78ZA7 375 aaKnown RBP20.91■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 GzmnQ920S1 248 aa20.91■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Galntl5Q9D4M9 431 aa20.91■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Tex21Q9R0U9 575 aa20.91■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Gdf10P97737 476 aa20.9■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Skap2Q3UND0 358 aa20.9■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Tsga10Q6NY15 697 aa20.9■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Bzw2Q91VK1 419 aaKnown RBP20.9■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Nap1l5Q9JJF0 156 aa20.9■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Gkap1Q9JMB0 366 aa20.9■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Nup188Q6ZQH8 1759 aa20.9■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Ltbp2O08999 1813 aa20.9■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Vmn2r79E9Q067 851 aa20.9■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Pgrmc1O55022 195 aa20.9■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 P4hbP09103 509 aaKnown RBP20.9■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Usp4P35123 962 aa20.9■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Hdgfl1Q2VPR5 283 aa20.9■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Prom2Q3UUY6 835 aa20.9■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Arid3aQ62431 601 aa20.9■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 KaznQ69ZS8 779 aa20.9■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Klra10Q9R1G6 266 aa20.9■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Zfp831A2ADM8 1628 aa20.9■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Vmn2r78K7N6U5 853 aa20.89■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Rps6ka1P18653 724 aa20.89■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Irx1P81068 480 aa20.89■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Tcerg1lQ3B807 590 aa20.89■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Calml4Q91WQ9 153 aa20.89■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Slfn1Q9Z0I7 337 aa20.89■□□□□ 0.94
Ccdc50-201ENSMUST00000039443 Pja1O55176 578 aa20.89■□□□□ 0.93
Ccdc50-201ENSMUST00000039443 Gap43P06837 227 aa20.89■□□□□ 0.93
Ccdc50-201ENSMUST00000039443 Ighmbp2P40694 993 aa20.89■□□□□ 0.93
Ccdc50-201ENSMUST00000039443 Ell2Q3UKU1 639 aa20.89■□□□□ 0.93
Ccdc50-201ENSMUST00000039443 Naa35Q6PHQ8 725 aa20.89■□□□□ 0.93
Ccdc50-201ENSMUST00000039443 Fam177a1Q8BR63 207 aa20.89■□□□□ 0.93
Ccdc50-201ENSMUST00000039443 Parp10Q8CIE4 960 aa20.89■□□□□ 0.93
Ccdc50-201ENSMUST00000039443 Lrrc42Q8R2U7 421 aa20.89■□□□□ 0.93
Ccdc50-201ENSMUST00000039443 Tesk2Q8VCT9 570 aa20.89■□□□□ 0.93
Ccdc50-201ENSMUST00000039443 Ube2sQ921J4 223 aa20.89■□□□□ 0.93
Ccdc50-201ENSMUST00000039443 Rnf34Q99KR6 376 aa20.89■□□□□ 0.93
Ccdc50-201ENSMUST00000039443 Kif13bA0A286YCV9 1847 aa20.88■□□□□ 0.93
Ccdc50-201ENSMUST00000039443 Prdm11A2AGX3 565 aa20.88■□□□□ 0.93
Ccdc50-201ENSMUST00000039443 Rnaseh1O70338 285 aa20.88■□□□□ 0.93
Ccdc50-201ENSMUST00000039443 Wdhd1P59328 1117 aa20.88■□□□□ 0.93
Ccdc50-201ENSMUST00000039443 Hnrnph2P70333 449 aaKnown RBP20.88■□□□□ 0.93
Ccdc50-201ENSMUST00000039443 EsrrbQ61539 433 aa20.88■□□□□ 0.93
Ccdc50-201ENSMUST00000039443 Phf8Q80TJ7 1023 aa20.88■□□□□ 0.93
Ccdc50-201ENSMUST00000039443 Fam193aQ8CGI1 1231 aaKnown RBP20.88■□□□□ 0.93
Ccdc50-201ENSMUST00000039443 Rbm41Q8JZV4 413 aa20.88■□□□□ 0.93
Ccdc50-201ENSMUST00000039443 AagabQ8R2R3 316 aa20.88■□□□□ 0.93
Ccdc50-201ENSMUST00000039443 Ascc1Q9D8Z1 356 aaKnown RBP20.88■□□□□ 0.93
Ccdc50-201ENSMUST00000039443 Usp14Q9JMA1 493 aaKnown RBP20.88■□□□□ 0.93
Ccdc50-201ENSMUST00000039443 GgcxQ9QYC7 757 aa20.88■□□□□ 0.93
Ccdc50-201ENSMUST00000039443 Ccdc24E9PUW8 296 aa20.87■□□□□ 0.93
Retrieved 100 of 22,080 RNA–protein pairs in 83.8 ms