RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 SpopQ6ZWS8 374 aa12.36□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Tor4aQ8BH02 426 aa12.36□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Slc39a11Q8BWY7 342 aa12.36□□□□□ -0.43
Topbp1-201ENSMUST00000035164 BlmhQ8R016 455 aa12.36□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Hsd3b7Q9EQC1 369 aa12.36□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Psmc2P46471 433 aa12.36□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Terf1P70371 421 aa12.36□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Spg7Q3ULF4 781 aa12.36□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Tab3Q571K4 716 aa12.36□□□□□ -0.43
Topbp1-201ENSMUST00000035164 SltmQ8CH25 1031 aaKnown RBP12.36□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Ndufv1Q91YT0 464 aa12.36□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Trim10Q9WUH5 489 aa12.36□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Foxo4Q9WVH3 505 aa12.36□□□□□ -0.43
Topbp1-201ENSMUST00000035164 1700018F24RikB2RW27 314 aa12.35□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Ppef2O35385 757 aa12.35□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Rnaseh1O70338 285 aa12.35□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Becn2P0DM65 447 aa12.35□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Krt19P19001 403 aa12.35□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Nedd4P46935 887 aaKnown RBP12.35□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Rps8P62242 208 aaKnown RBP12.35□□□□□ -0.43
Topbp1-201ENSMUST00000035164 PrimpolQ6P1E7 537 aa12.35□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Fsip1Q9D3V5 435 aa12.35□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Prl2c5Q9JLV9 222 aa12.35□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Rasal2E9PW37 1286 aa12.35□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Kcnh2O35219 1162 aa12.35□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Fdx1P46656 188 aa12.35□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Nap1l2P51860 460 aa12.35□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Gimap4Q99JY3 219 aa12.35□□□□□ -0.43
Topbp1-201ENSMUST00000035164 HibadhQ99L13 335 aaKnown RBP12.35□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Tacc3Q9JJ11 631 aa12.35□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Add1Q9QYC0 735 aaKnown RBP12.35□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Tex13cD3YU32 604 aa12.35□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Daam2Q80U19 1115 aa12.35□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Depdc1bQ8BH88 529 aa12.35□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Tom1l1Q923U0 474 aa12.35□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Tmem47Q9JJG6 181 aa12.35□□□□□ -0.43
Topbp1-201ENSMUST00000035164 PfasQ5SUR0 1337 aa12.35□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Casz1Q9CWL2 1761 aa12.35□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Sema4dO09126 861 aa12.35□□□□□ -0.43
Topbp1-201ENSMUST00000035164 H6pdQ8CFX1 789 aa12.35□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Nup58Q8R332 587 aa12.35□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Aipl1Q924K1 328 aa12.35□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Trmt112Q9DCG9 125 aa12.35□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Apba1B2RUJ5 842 aa12.34□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Tagap1P0CAX8 505 aa12.34□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Cd44P15379 778 aa12.34□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Scp2P32020 547 aaKnown RBP12.34□□□□□ -0.43
Topbp1-201ENSMUST00000035164 PtgdrP70263 357 aa12.34□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Slc8a1P70414 970 aa12.34□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Fgfr1opQ66JX5 399 aa12.34□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Hdac10Q6P3E7 666 aa12.34□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Hsf2bpQ9D4G2 338 aa12.34□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Rcan1Q9JHG6 198 aa12.34□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Ccdc78D3Z5T1 437 aa12.34□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Xirp1O70373 1129 aa12.34□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Mylk2Q8VCR8 613 aa12.34□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Chn1Q91V57 459 aa12.34□□□□□ -0.43
Topbp1-201ENSMUST00000035164 CactinQ9CS00 772 aaKnown RBP12.34□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Atp6v1e2Q9D593 226 aa12.34□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Ddx20Q9JJY4 825 aaKnown RBP12.34□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Arl6ip4Q9JM93 229 aa12.34□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Ddx25Q9QY15 484 aa12.34□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Stambpl1Q76N33 436 aa12.34□□□□□ -0.43
Topbp1-201ENSMUST00000035164 PccaQ91ZA3 724 aa12.34□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Ttc14Q9CSP9 761 aa12.34□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Ccdc91Q9D8L5 442 aa12.34□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Zscan18E9PUD6 809 aa12.34□□□□□ -0.43
Topbp1-201ENSMUST00000035164 TraddQ3U0V2 310 aa12.34□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Tspyl5Q69ZB3 406 aa12.34□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Gcfc2Q8BKT3 769 aa12.34□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Prl7b1Q8CGZ9 251 aa12.34□□□□□ -0.43
Topbp1-201ENSMUST00000035164 OtoaQ8K561 1137 aa12.34□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Gm36210A0A1B0GS00 229 aa12.34□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Gm10110D3Z5M2 615 aa12.34□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Atp6v0a2P15920 856 aa12.34□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Tatdn3Q3U1C6 294 aa12.34□□□□□ -0.43
Topbp1-201ENSMUST00000035164 LnpkQ7TQ95 425 aa12.34□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Cfap57Q9D180 1249 aa12.34□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Rabl3Q9D4V7 236 aa12.34□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Slc5a4aQ9ET37 656 aa12.34□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Kif13aQ9EQW7 1749 aa12.33□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Cep85lA0A1W2P884 806 aa12.33□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Ube4aE9Q735 1028 aa12.33□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Gimap9G3X987 291 aa12.33□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Pgrmc1O55022 195 aa12.33□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Mucl2P02815 138 aa12.33□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Ftl1P29391 183 aa12.33□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Scg2Q03517 617 aa12.33□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Krt87Q6IMF0 495 aa12.33□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Gm5622Q810Q0 167 aa12.33□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Ift74Q8BKE9 600 aa12.33□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Slc26a7Q8R2Z3 656 aa12.33□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Ankrd63A2ARS0 390 aa12.33□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Rsbn1lD3Z0K6 821 aa12.33□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Senp1P59110 640 aa12.33□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Pcif1P59114 706 aa12.33□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Il17raQ60943 864 aa12.33□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Ttc22Q8C159 568 aa12.33□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Pde6cQ91ZQ1 861 aa12.33□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Golga1Q9CW79 758 aa12.33□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 16.8 ms