RNA–Protein interactions for RNA: ENSMUST00000020827.6

Rnft1-201, Transcript of E3 ubiquitin-protein ligase RNFT1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnft1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1-201ENSMUST00000020827 Usp17ldG5E8G2 545 aa11.04□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Usp17lcG5E8I7 545 aa11.04□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Arhgap6O54834 987 aa11.04□□□□□ -0.64
Rnft1-201ENSMUST00000020827 PltpP55065 493 aa11.04□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Spata18Q0P557 537 aa11.04□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Dab2ipQ3UHC7 1189 aa11.04□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Ppp2r5bQ6PD28 497 aa11.04□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Fbxo38Q8BMI0 1194 aa11.04□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Ppfibp1Q8C8U0 969 aaKnown RBP11.04□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Kat5Q8CHK4 513 aa11.04□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Ushbp1Q8R370 680 aa11.04□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Glrx3Q9CQM9 337 aa11.04□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Zfp213E9QAW0 468 aa11.04□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Prom1O54990 867 aa11.04□□□□□ -0.64
Rnft1-201ENSMUST00000020827 NfibP97863 570 aaKnown RBP11.04□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Atp13a3Q5XF89 1219 aa11.04□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Atp2b4Q6Q477 1205 aa11.04□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Lca5Q80ST9 704 aa11.04□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Sun2Q8BJS4 731 aa11.04□□□□□ -0.64
Rnft1-201ENSMUST00000020827 CnstQ8CBC4 711 aa11.04□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Spire2Q8K1S6 718 aa11.04□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Dchs2A0A0A6YW72 3346 aa11.04□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Acot6Q32Q92 419 aa11.03□□□□□ -0.64
Rnft1-201ENSMUST00000020827 NntQ61941 1086 aaKnown RBP11.03□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Pabpc4Q6PHQ9 660 aaKnown RBP11.03□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Prdm4Q80V63 803 aa11.03□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Zbed4Q80WQ9 1168 aa11.03□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Cdc23Q8BGZ4 597 aa11.03□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Stx17Q9D0I4 301 aa11.03□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Lrp2bpQ9D4C6 346 aa11.03□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Klhl40Q9D783 621 aa11.03□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Cyth3O08967 399 aa11.03□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Psmd14O35593 310 aa11.03□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Fkbp3Q62446 224 aaKnown RBP11.03□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Map3k11Q80XI6 850 aa11.03□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Zhx2Q8C0C0 836 aaKnown RBP11.03□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Tmem192Q9CXT7 266 aa11.03□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Arhgef7Q9ES28 862 aa11.03□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Cdc42ep4Q9JM96 349 aaKnown RBP11.03□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Pex11aQ9Z211 246 aa11.03□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Tpm3-rs7D3Z2H9 248 aa11.03□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Msh3P13705 1091 aa11.03□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Ugt1a9Q62452 528 aa11.03□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Ccdc57Q6PHN1 1016 aa11.03□□□□□ -0.64
Rnft1-201ENSMUST00000020827 P2ry10Q8BFU7 328 aa11.03□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Q91Z58 1206 aa11.03□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Bcorl1A2AQH4 1781 aa11.03□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Polr2aP08775 1970 aaKnown RBP11.03□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Ifi207E9Q3L4 978 aa11.03□□□□□ -0.64
Rnft1-201ENSMUST00000020827 CnpP16330 420 aa11.03□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Gna15P30678 374 aa11.03□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Kcnb1Q03717 857 aa11.03□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Rasip1Q3U0S6 961 aa11.03□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Cep70Q6IQY5 616 aa11.03□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Herc4Q6PAV2 1057 aa11.03□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Fam193aQ8CGI1 1231 aaKnown RBP11.03□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Smc1aQ9CU62 1233 aaKnown RBP11.03□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Gdpd4Q3TT99 632 aa11.02□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Q8C1R3 189 aa11.02□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Ubxn6Q99PL6 442 aa11.02□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Gpihbp1Q9D1N2 228 aa11.02□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Sf3a3Q9D554 501 aaKnown RBP11.02□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Adamtsl1Q8BLI0 1745 aa11.02□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Col4a3Q9QZS0 1669 aa11.02□□□□□ -0.65
Rnft1-201ENSMUST00000020827 Gm3095E9Q058 166 aa11.02□□□□□ -0.65
Rnft1-201ENSMUST00000020827 Atp9aO70228 1047 aa11.02□□□□□ -0.65
Rnft1-201ENSMUST00000020827 Znf367Q0VDT2 340 aa11.02□□□□□ -0.65
Rnft1-201ENSMUST00000020827 Tfcp2l1Q3UNW5 479 aa11.02□□□□□ -0.65
Rnft1-201ENSMUST00000020827 Sycp1Q62209 993 aa11.02□□□□□ -0.65
Rnft1-201ENSMUST00000020827 Atg4cQ811C2 458 aa11.02□□□□□ -0.65
Rnft1-201ENSMUST00000020827 Q8BGN9 141 aa11.02□□□□□ -0.65
Rnft1-201ENSMUST00000020827 Rhobtb3Q9CTN4 611 aa11.02□□□□□ -0.65
Rnft1-201ENSMUST00000020827 Cmtm5Q9D6G9 156 aa11.02□□□□□ -0.65
Rnft1-201ENSMUST00000020827 Myh11O08638 1972 aa11.02□□□□□ -0.65
Rnft1-201ENSMUST00000020827 Ranbp2Q9ERU9 3053 aaKnown RBP11.02□□□□□ -0.65
Rnft1-201ENSMUST00000020827 Gm45140A0A0N4SUM8 220 aa11.02□□□□□ -0.65
Rnft1-201ENSMUST00000020827 Exoc3l2D3YUP5 789 aa11.02□□□□□ -0.65
Rnft1-201ENSMUST00000020827 Nsun7Q14AW5 724 aa11.02□□□□□ -0.65
Rnft1-201ENSMUST00000020827 Slc10a5Q5PT54 434 aa11.02□□□□□ -0.65
Rnft1-201ENSMUST00000020827 Hspa4Q61316 841 aa11.02□□□□□ -0.65
Rnft1-201ENSMUST00000020827 SugctQ7TNE1 436 aa11.02□□□□□ -0.65
Rnft1-201ENSMUST00000020827 Trip11E9Q512 1976 aa11.02□□□□□ -0.65
Rnft1-201ENSMUST00000020827 Lrrc37aB1AWG4 3215 aa11.02□□□□□ -0.65
Rnft1-201ENSMUST00000020827 Fam186bD3Z420 943 aa11.01□□□□□ -0.65
Rnft1-201ENSMUST00000020827 March10E9PX79 788 aa11.01□□□□□ -0.65
Rnft1-201ENSMUST00000020827 Oog1E9Q5G7 496 aa11.01□□□□□ -0.65
Rnft1-201ENSMUST00000020827 UgcgO88693 394 aa11.01□□□□□ -0.65
Rnft1-201ENSMUST00000020827 Kcnj4P52189 445 aa11.01□□□□□ -0.65
Rnft1-201ENSMUST00000020827 Acot10Q32MW3 439 aa11.01□□□□□ -0.65
Rnft1-201ENSMUST00000020827 Znf697Q569E7 569 aa11.01□□□□□ -0.65
Rnft1-201ENSMUST00000020827 Hdac10Q6P3E7 666 aa11.01□□□□□ -0.65
Rnft1-201ENSMUST00000020827 Tango6Q8C3S2 1079 aa11.01□□□□□ -0.65
Rnft1-201ENSMUST00000020827 Pop1Q8K205 1045 aa11.01□□□□□ -0.65
Rnft1-201ENSMUST00000020827 Gprc5cQ8K3J9 440 aa11.01□□□□□ -0.65
Rnft1-201ENSMUST00000020827 CrygnQ8VHL5 183 aa11.01□□□□□ -0.65
Rnft1-201ENSMUST00000020827 Cd248Q91V98 765 aa11.01□□□□□ -0.65
Rnft1-201ENSMUST00000020827 1700020D05RikQ99PB1 294 aa11.01□□□□□ -0.65
Rnft1-201ENSMUST00000020827 Usp29Q9ES63 869 aa11.01□□□□□ -0.65
Rnft1-201ENSMUST00000020827 Kcnq4Q9JK97 696 aa11.01□□□□□ -0.65
Rnft1-201ENSMUST00000020827 Fxr2Q9WVR4 673 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 28.3 ms