RNA–Protein interactions for RNA: YPR010C

RPA135, Transcript of RNA polymerase I second largest subunit A135, yeastyeast

Gene RPA135, Length 3,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA135YPR010C RPF2P36160 344 aaKnown RBP3.26□□□□□ -1.89
RPA135YPR010C ARN1P38731 627 aa3.26□□□□□ -1.89
RPA135YPR010C YFR018CP43599 363 aa3.26□□□□□ -1.89
RPA135YPR010C SWC4P53201 476 aa3.26□□□□□ -1.89
RPA135YPR010C ORC3P54790 616 aa3.26□□□□□ -1.89
RPA135YPR010C ECM9Q02202 377 aa3.26□□□□□ -1.89
RPA135YPR010C YDR132CQ03900 495 aa3.26□□□□□ -1.89
RPA135YPR010C MRL1Q06815 381 aa3.26□□□□□ -1.89
RPA135YPR010C GRS2Q06817 618 aa3.26□□□□□ -1.89
RPA135YPR010C HAL9Q12180 1030 aa3.26□□□□□ -1.89
RPA135YPR010C PST1Q12355 444 aa3.26□□□□□ -1.89
RPA135YPR010C VCX1Q99385 411 aa3.26□□□□□ -1.89
RPA135YPR010C EMC1P25574 760 aa3.26□□□□□ -1.89
RPA135YPR010C ARP2P32381 391 aaKnown RBP3.26□□□□□ -1.89
RPA135YPR010C CDC12P32468 407 aaKnown RBP3.26□□□□□ -1.89
RPA135YPR010C CSE1P33307 960 aa3.26□□□□□ -1.89
RPA135YPR010C CTP1P38152 299 aa3.26□□□□□ -1.89
RPA135YPR010C GIC1P38785 314 aa3.26□□□□□ -1.89
RPA135YPR010C THO1P40040 218 aaKnown RBP3.26□□□□□ -1.89
RPA135YPR010C FET5P43561 622 aa3.26□□□□□ -1.89
RPA135YPR010C RBG2P53295 368 aaKnown RBP3.26□□□□□ -1.89
RPA135YPR010C DSL1P53847 754 aa3.26□□□□□ -1.89
RPA135YPR010C COG5P53951 403 aa3.26□□□□□ -1.89
RPA135YPR010C YPL071CQ02864 156 aa3.26□□□□□ -1.89
RPA135YPR010C MMT1Q03218 510 aa3.26□□□□□ -1.89
RPA135YPR010C EFR3Q03653 782 aaKnown RBP3.26□□□□□ -1.89
RPA135YPR010C BCH1Q05029 724 aa3.26□□□□□ -1.89
RPA135YPR010C PUS7Q08647 676 aaKnown RBP3.26□□□□□ -1.89
RPA135YPR010C RTT10Q08924 1013 aa3.26□□□□□ -1.89
RPA135YPR010C YOR342CQ12182 319 aa3.26□□□□□ -1.89
RPA135YPR010C NFI1Q12216 726 aa3.26□□□□□ -1.89
RPA135YPR010C YOL114CQ12322 202 aa3.26□□□□□ -1.89
RPA135YPR010C AHA1Q12449 350 aaKnown RBP3.26□□□□□ -1.89
RPA135YPR010C SKS1Q12505 502 aa3.26□□□□□ -1.89
RPA135YPR010C YLR149CQ99296 730 aa3.26□□□□□ -1.89
RPA135YPR010C RPS14AP06367 137 aaKnown RBP3.25□□□□□ -1.89
RPA135YPR010C COR1P07256 457 aa3.25□□□□□ -1.89
RPA135YPR010C ATR1P13090 542 aa3.25□□□□□ -1.89
RPA135YPR010C DIT1P21623 536 aa3.25□□□□□ -1.89
RPA135YPR010C NUP2P32499 720 aa3.25□□□□□ -1.89
RPA135YPR010C SPS19P32573 292 aaKnown RBP3.25□□□□□ -1.89
RPA135YPR010C SSO1P32867 290 aa3.25□□□□□ -1.89
RPA135YPR010C SEC66P33754 206 aa3.25□□□□□ -1.89
RPA135YPR010C TIF3P34167 436 aaKnown RBP3.25□□□□□ -1.89
RPA135YPR010C YCR087C-AP37263 153 aa3.25□□□□□ -1.89
RPA135YPR010C EHT1P38295 451 aa3.25□□□□□ -1.89
RPA135YPR010C BFR1P38934 470 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89 RIP-Chip
RPA135YPR010C HXT6P39003 570 aaKnown RBP3.25□□□□□ -1.89
RPA135YPR010C HXT7P39004 570 aa3.25□□□□□ -1.89
RPA135YPR010C RPS14BP39516 138 aaKnown RBP3.25□□□□□ -1.89
RPA135YPR010C RBG1P39729 369 aa3.25□□□□□ -1.89
RPA135YPR010C SIT1P39980 628 aa3.25□□□□□ -1.89
RPA135YPR010C PKP1P40530 394 aa3.25□□□□□ -1.89
RPA135YPR010C SCY1P53009 804 aa3.25□□□□□ -1.89
RPA135YPR010C RPN14P53196 417 aa3.25□□□□□ -1.89
RPA135YPR010C MRPL19P53875 158 aa3.25□□□□□ -1.89
RPA135YPR010C CIK1Q01649 594 aa3.25□□□□□ -1.89
RPA135YPR010C BOP2Q06150 570 aa3.25□□□□□ -1.89
RPA135YPR010C ECM30Q06673 1274 aa3.25□□□□□ -1.89
RPA135YPR010C CIR2Q08822 631 aa3.25□□□□□ -1.89
RPA135YPR010C PFK27Q12471 397 aaPredicted RBP3.25□□□□□ -1.89
RPA135YPR010C PUT2P07275 575 aa3.25□□□□□ -1.89
RPA135YPR010C RPC40P07703 335 aaKnown RBP3.25□□□□□ -1.89
RPA135YPR010C PET9P18239 318 aaKnown RBP3.25□□□□□ -1.89
RPA135YPR010C MSB1P21339 1137 aaKnown RBP3.25□□□□□ -1.89
RPA135YPR010C TFC1P32367 649 aa3.25□□□□□ -1.89
RPA135YPR010C GMH1P36125 273 aa3.25□□□□□ -1.89
RPA135YPR010C PEX32P38292 413 aa3.25□□□□□ -1.89
RPA135YPR010C YLF2P38746 405 aa3.25□□□□□ -1.89
RPA135YPR010C RIX1P38883 763 aaPredicted RBP3.25□□□□□ -1.89
RPA135YPR010C MET30P39014 640 aa3.25□□□□□ -1.89
RPA135YPR010C MPT5P39016 859 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89 RIP-Chip
RPA135YPR010C YEL073CP39974 107 aa3.25□□□□□ -1.89
RPA135YPR010C PTR3P43606 678 aa3.25□□□□□ -1.89
RPA135YPR010C MTR3P48240 250 aaPredicted RBP3.25□□□□□ -1.89
RPA135YPR010C SDT1P53078 280 aa3.25□□□□□ -1.89
RPA135YPR010C STR3P53101 465 aaKnown RBP3.25□□□□□ -1.89
RPA135YPR010C YGL108CP53139 140 aa3.25□□□□□ -1.89
RPA135YPR010C YNR061CP53747 219 aa3.25□□□□□ -1.89
RPA135YPR010C BSP1Q06604 576 aa3.25□□□□□ -1.89
RPA135YPR010C GPI11Q06636 219 aa3.25□□□□□ -1.89
RPA135YPR010C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89not detected
RPA135YPR010C VIK1Q12045 647 aa3.25□□□□□ -1.89
RPA135YPR010C ATG34Q12292 412 aa3.25□□□□□ -1.89
RPA135YPR010C NOT5Q12514 560 aaPredicted RBP3.25□□□□□ -1.89
RPA135YPR010C HXK2P04807 486 aaKnown RBP3.25□□□□□ -1.89
RPA135YPR010C YCK1P23291 538 aa3.25□□□□□ -1.89
RPA135YPR010C TRX3P25372 127 aa3.25□□□□□ -1.89
RPA135YPR010C PET127P32606 800 aa3.25□□□□□ -1.89
RPA135YPR010C AFR1P33304 620 aa3.25□□□□□ -1.89
RPA135YPR010C YKL097CP34245 136 aa3.25□□□□□ -1.89
RPA135YPR010C MAC1P35192 417 aa3.25□□□□□ -1.89
RPA135YPR010C DED81P38707 554 aaKnown RBP3.25□□□□□ -1.89
RPA135YPR010C TIM17P39515 158 aa3.25□□□□□ -1.89
RPA135YPR010C AIM2P39721 246 aa3.25□□□□□ -1.89
RPA135YPR010C BUD13P46947 266 aaPredicted RBP3.25□□□□□ -1.89
RPA135YPR010C EMC2P47133 292 aaKnown RBP3.25□□□□□ -1.89
RPA135YPR010C ATH1P48016 1211 aa3.25□□□□□ -1.89
RPA135YPR010C TOM22P49334 152 aa3.25□□□□□ -1.89
RPA135YPR010C RMR1P53060 241 aa3.25□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms