RNA–Protein interactions for RNA: YPL042C

SSN3, Transcript of Cyclin-dependent protein kinase, yeastyeast

Gene SSN3, Length 1,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN3YPL042C MRPL23Q12487 163 aaPredicted RBP9.31□□□□□ -0.92
SSN3YPL042C MDM12Q92328 271 aa9.31□□□□□ -0.92
SSN3YPL042C CBP2P03874 630 aaPredicted RBP9.3□□□□□ -0.92
SSN3YPL042C SEO1P39709 593 aa9.3□□□□□ -0.92
SSN3YPL042C AMA1P50082 593 aa9.3□□□□□ -0.92
SSN3YPL042C TAF6P53040 516 aa9.3□□□□□ -0.92
SSN3YPL042C RCF2P53721 224 aa9.3□□□□□ -0.92
SSN3YPL042C PRM1P53835 661 aa9.3□□□□□ -0.92
SSN3YPL042C NUP100Q02629 959 aa9.3□□□□□ -0.92
SSN3YPL042C YMR209CQ03648 457 aa9.3□□□□□ -0.92
SSN3YPL042C MSC3Q05812 728 aa9.3□□□□□ -0.92
SSN3YPL042C ATP16Q12165 160 aa9.3□□□□□ -0.92
SSN3YPL042C MSL5Q12186 476 aaKnown RBP RIP-Chip data9.3□□□□□ -0.92not detected
SSN3YPL042C RGS2Q99188 309 aa9.3□□□□□ -0.92
SSN3YPL042C SSA3P09435 649 aaKnown RBP9.29□□□□□ -0.92
SSN3YPL042C GCY1P14065 312 aaKnown RBP RIP-Chip data9.29□□□□□ -0.92not detected
SSN3YPL042C AMD2P22580 549 aa9.29□□□□□ -0.92
SSN3YPL042C CLB4P24871 460 aa9.29□□□□□ -0.92
SSN3YPL042C GEX1P25596 615 aa9.29□□□□□ -0.92
SSN3YPL042C MCM5P29496 775 aaKnown RBP9.29□□□□□ -0.92
SSN3YPL042C MRP21P38175 177 aa9.29□□□□□ -0.92
SSN3YPL042C EGD2P38879 174 aaKnown RBP9.29□□□□□ -0.92
SSN3YPL042C FAA3P39002 694 aa9.29□□□□□ -0.92
SSN3YPL042C YJR056CP47115 236 aa9.29□□□□□ -0.92
SSN3YPL042C ERP6P53198 216 aa9.29□□□□□ -0.92
SSN3YPL042C MRPL1Q04599 285 aa9.29□□□□□ -0.92
SSN3YPL042C PEX15Q08215 383 aa9.29□□□□□ -0.92
SSN3YPL042C GPN2Q08726 347 aaPredicted RBP9.29□□□□□ -0.92
SSN3YPL042C YOL114CQ12322 202 aa9.29□□□□□ -0.92
SSN3YPL042C YMR085WP0CF18 432 aa9.29□□□□□ -0.92
SSN3YPL042C NMT1P14743 455 aa9.29□□□□□ -0.92
SSN3YPL042C ATP11P32453 318 aa9.29□□□□□ -0.92
SSN3YPL042C STS1P38637 319 aa9.29□□□□□ -0.92
SSN3YPL042C EXO1P39875 702 aa9.29□□□□□ -0.92
SSN3YPL042C IBA57P47158 497 aa9.29□□□□□ -0.92
SSN3YPL042C SSU72P53538 206 aaPredicted RBP9.29□□□□□ -0.92
SSN3YPL042C EFM6P53970 246 aa9.29□□□□□ -0.92
SSN3YPL042C REG1Q00816 1014 aa9.29□□□□□ -0.92
SSN3YPL042C ATC1Q04005 294 aa9.29□□□□□ -0.92
SSN3YPL042C PNS1Q12412 539 aa9.29□□□□□ -0.92
SSN3YPL042C PEX11Q12462 236 aa9.29□□□□□ -0.92
SSN3YPL042C SKM1Q12469 655 aa9.29□□□□□ -0.92
SSN3YPL042C CMR1Q12510 522 aaKnown RBP9.29□□□□□ -0.92
SSN3YPL042C YMR030W-AQ3E760 96 aa9.29□□□□□ -0.92
SSN3YPL042C RAD7P06779 565 aa9.28□□□□□ -0.92
SSN3YPL042C YSP3P25036 478 aa9.28□□□□□ -0.92
SSN3YPL042C RPD3P32561 433 aa9.28□□□□□ -0.92
SSN3YPL042C DAD2P36162 133 aa9.28□□□□□ -0.92
SSN3YPL042C WSS1P38838 269 aa9.28□□□□□ -0.92
SSN3YPL042C LRO1P40345 661 aa9.28□□□□□ -0.92
SSN3YPL042C ALK1P43633 760 aaKnown RBP9.28□□□□□ -0.92
SSN3YPL042C TIM21P53220 239 aa9.28□□□□□ -0.92
SSN3YPL042C YTP1P53584 459 aa9.28□□□□□ -0.92
SSN3YPL042C MOT3P54785 490 aaKnown RBP9.28□□□□□ -0.92
SSN3YPL042C YLR173WQ06247 608 aa9.28□□□□□ -0.92
SSN3YPL042C YLR177WQ06251 628 aa9.28□□□□□ -0.92
SSN3YPL042C SYT1Q06836 1226 aa9.28□□□□□ -0.92
SSN3YPL042C SOG2Q08817 791 aa9.28□□□□□ -0.92
SSN3YPL042C GET4Q12125 312 aa9.28□□□□□ -0.92
SSN3YPL042C YLR046CQ12253 270 aa9.28□□□□□ -0.92
SSN3YPL042C NTO1Q12311 748 aa9.28□□□□□ -0.92
SSN3YPL042C SCH9P11792 824 aaKnown RBP9.27□□□□□ -0.93
SSN3YPL042C TEC1P18412 486 aa9.27□□□□□ -0.93
SSN3YPL042C ARF2P19146 181 aaKnown RBP9.27□□□□□ -0.93
SSN3YPL042C SGF29P25554 259 aa9.27□□□□□ -0.93
SSN3YPL042C ITR2P30606 609 aa9.27□□□□□ -0.93
SSN3YPL042C PHA2P32452 334 aa9.27□□□□□ -0.93
SSN3YPL042C AEP1P32493 518 aa9.27□□□□□ -0.93
SSN3YPL042C TFA2P36145 328 aa9.27□□□□□ -0.93
SSN3YPL042C RIM2P38127 377 aa9.27□□□□□ -0.93
SSN3YPL042C HEK2P38199 381 aaKnown RBP RIP-Chip data9.27□□□□□ -0.93 RIP-Chip
SSN3YPL042C SSH1P38353 490 aaKnown RBP9.27□□□□□ -0.93
SSN3YPL042C GUS1P46655 708 aaKnown RBP RIP-Chip data9.27□□□□□ -0.93not detected
SSN3YPL042C YJR115WP47152 169 aa9.27□□□□□ -0.93
SSN3YPL042C MRK1P50873 501 aa9.27□□□□□ -0.93
SSN3YPL042C PET117Q02771 107 aa9.27□□□□□ -0.93
SSN3YPL042C RNY1Q02933 434 aaKnown RBP9.27□□□□□ -0.93
SSN3YPL042C YDR109CQ04585 715 aa9.27□□□□□ -0.93
SSN3YPL042C YPR147CQ06522 304 aaKnown RBP9.27□□□□□ -0.93
SSN3YPL042C NGL1Q08213 363 aaKnown RBP9.27□□□□□ -0.93
SSN3YPL042C REX4Q08237 289 aa9.27□□□□□ -0.93
SSN3YPL042C REV1P12689 985 aa9.26□□□□□ -0.93
SSN3YPL042C GUK1P15454 187 aaKnown RBP9.26□□□□□ -0.93
SSN3YPL042C PRP4P20053 465 aaKnown RBP9.26□□□□□ -0.93
SSN3YPL042C DCC1P25559 380 aa9.26□□□□□ -0.93
SSN3YPL042C BEM1P29366 551 aa9.26□□□□□ -0.93
SSN3YPL042C GCD11P32481 527 aaKnown RBP9.26□□□□□ -0.93
SSN3YPL042C YSC84P32793 468 aa9.26□□□□□ -0.93
SSN3YPL042C GEX2P36173 615 aa9.26□□□□□ -0.93
SSN3YPL042C EDS1P38073 919 aa9.26□□□□□ -0.93
SSN3YPL042C PHO89P38361 574 aa9.26□□□□□ -0.93
SSN3YPL042C HEM14P40012 539 aa9.26□□□□□ -0.93
SSN3YPL042C YER085CP40058 173 aa9.26□□□□□ -0.93
SSN3YPL042C EMP65P40085 556 aa9.26□□□□□ -0.93
SSN3YPL042C FAR3P46671 204 aa9.26□□□□□ -0.93
SSN3YPL042C ARH1P48360 493 aa9.26□□□□□ -0.93
SSN3YPL042C RRN9P53437 365 aa9.26□□□□□ -0.93
SSN3YPL042C RPN9Q04062 393 aaKnown RBP9.26□□□□□ -0.93
SSN3YPL042C NOP12Q08208 459 aaKnown RBP9.26□□□□□ -0.93
SSN3YPL042C RMD5Q12508 421 aa9.26□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 68.8 ms