RNA–Protein interactions for RNA: YOR227W

HER1, Transcript of Protein of unknown function, yeastyeast

Gene HER1, Length 3,741 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HER1YOR227W ATG31Q12421 196 aa1.91□□□□□ -2.1
HER1YOR227W YBR255C-AQ3E776 120 aa1.91□□□□□ -2.1
HER1YOR227W TOR1P35169 2470 aa1.91□□□□□ -2.1
HER1YOR227W UGA1P17649 471 aa1.9□□□□□ -2.1
HER1YOR227W CDC42P19073 191 aa1.9□□□□□ -2.1
HER1YOR227W NDI1P32340 513 aa1.9□□□□□ -2.1
HER1YOR227W ERG1P32476 496 aaKnown RBP1.9□□□□□ -2.1
HER1YOR227W COT1P32798 439 aa1.9□□□□□ -2.1
HER1YOR227W RFC5P38251 354 aa1.9□□□□□ -2.1
HER1YOR227W WSS1P38838 269 aa1.9□□□□□ -2.1
HER1YOR227W GPI16P38875 610 aa1.9□□□□□ -2.1
HER1YOR227W UBP5P39944 805 aa1.9□□□□□ -2.1
HER1YOR227W TMN3P40071 706 aa1.9□□□□□ -2.1
HER1YOR227W PCI8P40512 444 aa1.9□□□□□ -2.1
HER1YOR227W YFL066CP43538 392 aa1.9□□□□□ -2.1
HER1YOR227W YFR018CP43599 363 aa1.9□□□□□ -2.1
HER1YOR227W CHA4P43634 648 aa1.9□□□□□ -2.1
HER1YOR227W NPA3P47122 385 aa1.9□□□□□ -2.1
HER1YOR227W GTO1P48239 356 aa1.9□□□□□ -2.1
HER1YOR227W MRK1P50873 501 aa1.9□□□□□ -2.1
HER1YOR227W MND1P53102 219 aa1.9□□□□□ -2.1
HER1YOR227W EAF7P53911 425 aaKnown RBP1.9□□□□□ -2.1
HER1YOR227W UBP2Q01476 1272 aa1.9□□□□□ -2.1
HER1YOR227W YMR178WQ03219 274 aaKnown RBP1.9□□□□□ -2.1
HER1YOR227W RSN1Q03516 953 aa1.9□□□□□ -2.1
HER1YOR227W RPS10AQ08745 105 aaPredicted RBP1.9□□□□□ -2.1
HER1YOR227W PLP2Q12017 286 aa1.9□□□□□ -2.1
HER1YOR227W AIM45Q12480 344 aaKnown RBP1.9□□□□□ -2.1
HER1YOR227W ERG20P08524 352 aaKnown RBP1.9□□□□□ -2.11
HER1YOR227W SNA3P14359 133 aa1.9□□□□□ -2.11
HER1YOR227W CKA2P19454 339 aa1.9□□□□□ -2.11
HER1YOR227W PRP2P20095 876 aaPredicted RBP1.9□□□□□ -2.11
HER1YOR227W CLN1P20437 546 aa1.9□□□□□ -2.11
HER1YOR227W VPS34P22543 875 aa1.9□□□□□ -2.11
HER1YOR227W RPS5P26783 225 aaKnown RBP1.9□□□□□ -2.11
HER1YOR227W IMP3P32899 183 aaPredicted RBP1.9□□□□□ -2.11
HER1YOR227W YKR015CP36111 568 aa1.9□□□□□ -2.11
HER1YOR227W GLG1P36143 616 aa1.9□□□□□ -2.11
HER1YOR227W MRPL37P36532 105 aa1.9□□□□□ -2.11
HER1YOR227W IML3P38265 245 aa1.9□□□□□ -2.11
HER1YOR227W TAE1P38340 232 aa1.9□□□□□ -2.11
HER1YOR227W IMD2P38697 523 aaKnown RBP1.9□□□□□ -2.11
HER1YOR227W FMO1P38866 432 aa1.9□□□□□ -2.11
HER1YOR227W YJL193WP39542 402 aa1.9□□□□□ -2.11
HER1YOR227W YER085CP40058 173 aa1.9□□□□□ -2.11
HER1YOR227W FIS1P40515 155 aa1.9□□□□□ -2.11
HER1YOR227W FKH2P41813 862 aa1.9□□□□□ -2.11
HER1YOR227W YAR1P46683 200 aa1.9□□□□□ -2.11
HER1YOR227W RPS7BP48164 190 aaKnown RBP1.9□□□□□ -2.11
HER1YOR227W DIA3P52290 468 aa1.9□□□□□ -2.11
HER1YOR227W VPS73P53142 486 aaKnown RBP1.9□□□□□ -2.11
HER1YOR227W LIF1P53150 421 aa1.9□□□□□ -2.11
HER1YOR227W YGR079WP53249 370 aa1.9□□□□□ -2.11
HER1YOR227W COP1P53622 1201 aaKnown RBP1.9□□□□□ -2.11
HER1YOR227W YNL144CP53907 740 aa1.9□□□□□ -2.11
HER1YOR227W OCA2P53949 197 aa1.9□□□□□ -2.11
HER1YOR227W YMR265CQ03508 461 aaKnown RBP1.9□□□□□ -2.11
HER1YOR227W IZH3Q07959 543 aa1.9□□□□□ -2.11
HER1YOR227W PAA1Q12447 191 aaKnown RBP1.9□□□□□ -2.11
HER1YOR227W YBR085C-AO43137 85 aa1.9□□□□□ -2.11
HER1YOR227W RPL6BP05739 176 aaKnown RBP1.9□□□□□ -2.11
HER1YOR227W CDC36P06100 191 aaPredicted RBP1.9□□□□□ -2.11
HER1YOR227W ILV5P06168 395 aaKnown RBP1.9□□□□□ -2.11
HER1YOR227W RPS16AP0CX51 143 aaKnown RBP1.9□□□□□ -2.11
HER1YOR227W RPS16BP0CX52 143 aaKnown RBP1.9□□□□□ -2.11
HER1YOR227W DSS4P32601 143 aa1.9□□□□□ -2.11
HER1YOR227W ELM1P32801 640 aa1.9□□□□□ -2.11
HER1YOR227W YBR144CP34215 104 aa1.9□□□□□ -2.11
HER1YOR227W BMH2P34730 273 aaKnown RBP1.9□□□□□ -2.11
HER1YOR227W NTR2P36118 322 aaPredicted RBP1.9□□□□□ -2.11
HER1YOR227W GLY1P37303 387 aaKnown RBP1.9□□□□□ -2.11
HER1YOR227W YBR259WP38338 688 aa1.9□□□□□ -2.11
HER1YOR227W SDH8P38345 138 aa1.9□□□□□ -2.11
HER1YOR227W STP2P38704 541 aa1.9□□□□□ -2.11
HER1YOR227W SHQ1P40486 507 aaPredicted RBP1.9□□□□□ -2.11
HER1YOR227W OTU1P43558 301 aa1.9□□□□□ -2.11
HER1YOR227W YIP5P53108 310 aa1.9□□□□□ -2.11
HER1YOR227W SKO1Q02100 647 aa1.9□□□□□ -2.11
HER1YOR227W RPL6AQ02326 176 aaKnown RBP1.9□□□□□ -2.11
HER1YOR227W YLR173WQ06247 608 aa1.9□□□□□ -2.11
HER1YOR227W CRN1Q06440 651 aa1.9□□□□□ -2.11
HER1YOR227W HMI1Q12039 706 aa1.9□□□□□ -2.11
HER1YOR227W PUF2Q12221 1075 aaKnown RBP RIP-Chip data1.9□□□□□ -2.11not detected
HER1YOR227W TRM13Q12383 476 aa1.9□□□□□ -2.11
HER1YOR227W NBL1Q3E7Y6 73 aa1.9□□□□□ -2.11
HER1YOR227W ILV2P07342 687 aaKnown RBP1.89□□□□□ -2.11
HER1YOR227W SSA3P09435 649 aaKnown RBP1.89□□□□□ -2.11
HER1YOR227W KGD2P19262 463 aaPredicted RBP1.89□□□□□ -2.11
HER1YOR227W MCM4P30665 933 aaKnown RBP1.89□□□□□ -2.11
HER1YOR227W NTH1P32356 751 aa1.89□□□□□ -2.11
HER1YOR227W HIR2P32480 875 aa1.89□□□□□ -2.11
HER1YOR227W CDC5P32562 705 aa1.89□□□□□ -2.11
HER1YOR227W HES1P35843 434 aa1.89□□□□□ -2.11
HER1YOR227W SNU114P36048 1008 aaKnown RBP1.89□□□□□ -2.11
HER1YOR227W YHR122WP38829 231 aa1.89□□□□□ -2.11
HER1YOR227W ASG1P40467 964 aa1.89□□□□□ -2.11
HER1YOR227W HAM1P47119 197 aaKnown RBP1.89□□□□□ -2.11
HER1YOR227W HST3P53687 447 aa1.89□□□□□ -2.11
HER1YOR227W IPI3P53877 555 aa1.89□□□□□ -2.11
HER1YOR227W ARK1P53974 638 aa1.89□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms